Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS334D11f
         (395 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_02_0073 - 8020401-8020512,8020594-8020679,8020761-8020921,802...    29   1.4  
02_04_0491 + 23417790-23417859,23418550-23418773,23418951-234189...    27   5.5  
07_03_0548 + 19349943-19350290,19350372-19351100                       27   7.2  
09_04_0082 + 14408962-14409436,14413356-14413780,14414067-14414528     26   9.6  

>11_02_0073 -
           8020401-8020512,8020594-8020679,8020761-8020921,
           8021196-8021400,8021664-8021697,8022352-8022422,
           8023363-8023542,8023625-8023765,8023859-8023975,
           8024074-8024469
          Length = 500

 Score = 29.1 bits (62), Expect = 1.4
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +2

Query: 89  TLKAKDACYKPFTASHAQTTSLKAMHTKEGRGLPIRT*TSSKQHR 223
           T + K   +  FTA  A   +++ +H KE +G  +R   S  +HR
Sbjct: 141 TKENKGFAFVNFTAKEAAQRAIEELHDKEHKGRTLRCSLSQAKHR 185


>02_04_0491 +
           23417790-23417859,23418550-23418773,23418951-23418964,
           23419842-23419968,23420092-23420161,23420661-23420766,
           23420849-23420966,23421457-23421576,23421679-23421859,
           23421954-23422030,23422117-23422169,23422336-23422387,
           23422683-23423885
          Length = 804

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +1

Query: 157 GNAHKGGQGVTDKNLDELETA*KTATAYRPASSTG 261
           G +       +D+ +D+  TA  T T Y   SSTG
Sbjct: 467 GGSDSDTSATSDEGVDDTATAGTTTTGYEAGSSTG 501


>07_03_0548 + 19349943-19350290,19350372-19351100
          Length = 358

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 94  ESKRRLLQTFYSKSCSNYKFKGNAHKGG 177
           + KR++L+ F    C+  +  GNA+ GG
Sbjct: 251 KQKRKVLELFRRSRCAEERCDGNANAGG 278


>09_04_0082 + 14408962-14409436,14413356-14413780,14414067-14414528
          Length = 453

 Score = 26.2 bits (55), Expect = 9.6
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +2

Query: 128 ASHAQTTSLKAMHTKEGRGLPI 193
           AS+A TT+  + HT   +GLP+
Sbjct: 416 ASNAMTTTTSSTHTMRSQGLPL 437


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,493,786
Number of Sequences: 37544
Number of extensions: 135827
Number of successful extensions: 325
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 325
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 684860244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)