Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS334D11f
         (395 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-762|AAF59007.1|  746|Drosophila melanogaster CG8181-PA ...    30   1.3  
AE014134-2436|AAN10860.1|  424|Drosophila melanogaster CG31765-P...    28   5.2  
AE014298-1333|AAF46496.2|  339|Drosophila melanogaster CG12650-P...    27   6.8  

>AE013599-762|AAF59007.1|  746|Drosophila melanogaster CG8181-PA
           protein.
          Length = 746

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 19/46 (41%), Positives = 27/46 (58%)
 Frame = +2

Query: 125 TASHAQTTSLKAMHTKEGRGLPIRT*TSSKQHRRLQQHTGQRAAPA 262
           TA+   TTS +A  T +    P+RT T+SK H+    H+ +R APA
Sbjct: 247 TAAPPTTTSTRAATTTQRPTPPLRT-TTSKPHK---THSSRRPAPA 288


>AE014134-2436|AAN10860.1|  424|Drosophila melanogaster CG31765-PA
           protein.
          Length = 424

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -2

Query: 301 WSTDCTNICICLTGRCC 251
           W  DC N+C C  G  C
Sbjct: 25  WGLDCKNLCQCQNGAAC 41


>AE014298-1333|AAF46496.2|  339|Drosophila melanogaster CG12650-PB
           protein.
          Length = 339

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 19/65 (29%), Positives = 25/65 (38%)
 Frame = +2

Query: 83  LNTLKAKDACYKPFTASHAQTTSLKAMHTKEGRGLPIRT*TSSKQHRRLQQHTGQRAAPA 262
           L  L  K+ C +   +S+  T +  A  T            + KQHR  QQH    A  A
Sbjct: 10  LGKLGGKNCCRRSSNSSNNGTAAATAARTTATSAAAAAAAAAQKQHRAQQQHQLTAATVA 69

Query: 263 C*TNA 277
             T A
Sbjct: 70  TITAA 74


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,390,461
Number of Sequences: 53049
Number of extensions: 241048
Number of successful extensions: 786
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1128794130
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)