Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS334D04f
(333 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M15661-1|AAA36589.1| 106|Homo sapiens protein ( Human ribosomal... 118 3e-27
CR542166-1|CAG46963.1| 106|Homo sapiens RPL36AL protein. 118 3e-27
BC107716-1|AAI07717.1| 106|Homo sapiens ribosomal protein L36a-... 118 3e-27
BC070207-1|AAH70207.1| 106|Homo sapiens ribosomal protein L36a-... 118 3e-27
BC003145-1|AAH03145.1| 106|Homo sapiens ribosomal protein L36a-... 118 3e-27
BC000741-1|AAH00741.1| 106|Homo sapiens ribosomal protein L36a-... 118 3e-27
AB063609-1|BAC19836.1| 106|Homo sapiens ribosomal protein L36a-... 118 3e-27
U78027-3|AAB64204.1| 106|Homo sapiens L44-like ribosomal protei... 117 8e-27
CR542198-1|CAG46995.1| 106|Homo sapiens RPL36A protein. 117 8e-27
BC070204-1|AAH70204.1| 106|Homo sapiens ribosomal protein L36a ... 117 8e-27
BC062219-1|AAH62219.1| 106|Homo sapiens ribosomal protein L36a ... 117 8e-27
BC031015-1|AAH31015.1| 106|Homo sapiens ribosomal protein L36a ... 117 8e-27
BC001781-1|AAH01781.1| 106|Homo sapiens ribosomal protein L36a ... 117 8e-27
AY927233-1|AAX08138.1| 106|Homo sapiens cell growth-inhibiting ... 117 8e-27
AY305871-1|AAQ95213.1| 106|Homo sapiens migration-inducing prot... 117 8e-27
AL035422-5|CAI42360.1| 106|Homo sapiens ribosomal protein L36a ... 117 8e-27
BC058160-1|AAH58160.1| 25|Homo sapiens LOC554234 protein protein. 44 9e-05
AL831918-1|CAD38579.1| 810|Homo sapiens hypothetical protein pr... 29 2.6
AJ586138-1|CAE51938.1| 3395|Homo sapiens ubiquitin-specific prot... 29 2.6
AB011142-1|BAA25496.2| 3412|Homo sapiens KIAA0570 protein protein. 29 2.6
BC021709-1|AAH21709.1| 437|Homo sapiens sarcoglycan, epsilon pr... 28 7.9
AY359042-1|AAQ89401.1| 437|Homo sapiens SGCE protein. 28 7.9
AL022327-1|CAO03519.1| 336|Homo sapiens novel protein (FLJ41993... 28 7.9
AK123987-1|BAC85743.1| 336|Homo sapiens egion. protein. 28 7.9
AJ000534-1|CAA04167.1| 437|Homo sapiens epsilon-sarcoglycan pro... 28 7.9
AF516515-1|AAM64204.1| 437|Homo sapiens mutant epsilon-sarcogly... 28 7.9
AF036364-1|AAC04368.1| 413|Homo sapiens epsilon-sarcoglycan pro... 28 7.9
AC069292-1|AAS07485.1| 437|Homo sapiens unknown protein. 28 7.9
AB117974-1|BAD21206.1| 427|Homo sapiens brain epsilon-sarcoglyc... 28 7.9
>M15661-1|AAA36589.1| 106|Homo sapiens protein ( Human ribosomal
protein mRNA, complete cds. ).
Length = 106
Score = 118 bits (285), Expect = 3e-27
Identities = 57/99 (57%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Frame = +1
Query: 4 RRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIV 183
RRT+ +QYKK K+ AQGRRRYDRKQ GYGGQ+KPIF IV
Sbjct: 8 RRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIV 67
Query: 184 LRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 294
LRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 68 LRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>CR542166-1|CAG46963.1| 106|Homo sapiens RPL36AL protein.
Length = 106
Score = 118 bits (285), Expect = 3e-27
Identities = 57/99 (57%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Frame = +1
Query: 4 RRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIV 183
RRT+ +QYKK K+ AQGRRRYDRKQ GYGGQ+KPIF IV
Sbjct: 8 RRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIV 67
Query: 184 LRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 294
LRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 68 LRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>BC107716-1|AAI07717.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 118 bits (285), Expect = 3e-27
Identities = 57/99 (57%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Frame = +1
Query: 4 RRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIV 183
RRT+ +QYKK K+ AQGRRRYDRKQ GYGGQ+KPIF IV
Sbjct: 8 RRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIV 67
Query: 184 LRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 294
LRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 68 LRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>BC070207-1|AAH70207.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 118 bits (285), Expect = 3e-27
Identities = 57/99 (57%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Frame = +1
Query: 4 RRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIV 183
RRT+ +QYKK K+ AQGRRRYDRKQ GYGGQ+KPIF IV
Sbjct: 8 RRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIV 67
Query: 184 LRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 294
LRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 68 LRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>BC003145-1|AAH03145.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 118 bits (285), Expect = 3e-27
Identities = 57/99 (57%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Frame = +1
Query: 4 RRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIV 183
RRT+ +QYKK K+ AQGRRRYDRKQ GYGGQ+KPIF IV
Sbjct: 8 RRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIV 67
Query: 184 LRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 294
LRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 68 LRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>BC000741-1|AAH00741.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 118 bits (285), Expect = 3e-27
Identities = 57/99 (57%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Frame = +1
Query: 4 RRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIV 183
RRT+ +QYKK K+ AQGRRRYDRKQ GYGGQ+KPIF IV
Sbjct: 8 RRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIV 67
Query: 184 LRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 294
LRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 68 LRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>AB063609-1|BAC19836.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 118 bits (285), Expect = 3e-27
Identities = 57/99 (57%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Frame = +1
Query: 4 RRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIV 183
RRT+ +QYKK K+ AQGRRRYDRKQ GYGGQ+KPIF IV
Sbjct: 8 RRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIV 67
Query: 184 LRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 294
LRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 68 LRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>U78027-3|AAB64204.1| 106|Homo sapiens L44-like ribosomal protein
protein.
Length = 106
Score = 117 bits (282), Expect = 8e-27
Identities = 56/99 (56%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Frame = +1
Query: 4 RRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIV 183
RRT+ +QYKK K+ AQG+RRYDRKQ GYGGQ+KPIF IV
Sbjct: 8 RRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIV 67
Query: 184 LRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 294
LRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 68 LRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>CR542198-1|CAG46995.1| 106|Homo sapiens RPL36A protein.
Length = 106
Score = 117 bits (282), Expect = 8e-27
Identities = 56/99 (56%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Frame = +1
Query: 4 RRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIV 183
RRT+ +QYKK K+ AQG+RRYDRKQ GYGGQ+KPIF IV
Sbjct: 8 RRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIV 67
Query: 184 LRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 294
LRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 68 LRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>BC070204-1|AAH70204.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 117 bits (282), Expect = 8e-27
Identities = 56/99 (56%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Frame = +1
Query: 4 RRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIV 183
RRT+ +QYKK K+ AQG+RRYDRKQ GYGGQ+KPIF IV
Sbjct: 8 RRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIV 67
Query: 184 LRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 294
LRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 68 LRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>BC062219-1|AAH62219.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 117 bits (282), Expect = 8e-27
Identities = 56/99 (56%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Frame = +1
Query: 4 RRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIV 183
RRT+ +QYKK K+ AQG+RRYDRKQ GYGGQ+KPIF IV
Sbjct: 8 RRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIV 67
Query: 184 LRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 294
LRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 68 LRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>BC031015-1|AAH31015.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 117 bits (282), Expect = 8e-27
Identities = 56/99 (56%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Frame = +1
Query: 4 RRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIV 183
RRT+ +QYKK K+ AQG+RRYDRKQ GYGGQ+KPIF IV
Sbjct: 8 RRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIV 67
Query: 184 LRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 294
LRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 68 LRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>BC001781-1|AAH01781.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 117 bits (282), Expect = 8e-27
Identities = 56/99 (56%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Frame = +1
Query: 4 RRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIV 183
RRT+ +QYKK K+ AQG+RRYDRKQ GYGGQ+KPIF IV
Sbjct: 8 RRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIV 67
Query: 184 LRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 294
LRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 68 LRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>AY927233-1|AAX08138.1| 106|Homo sapiens cell growth-inhibiting
protein 15 protein.
Length = 106
Score = 117 bits (282), Expect = 8e-27
Identities = 56/99 (56%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Frame = +1
Query: 4 RRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIV 183
RRT+ +QYKK K+ AQG+RRYDRKQ GYGGQ+KPIF IV
Sbjct: 8 RRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIV 67
Query: 184 LRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 294
LRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 68 LRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>AY305871-1|AAQ95213.1| 106|Homo sapiens migration-inducing protein
6 protein.
Length = 106
Score = 117 bits (282), Expect = 8e-27
Identities = 56/99 (56%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Frame = +1
Query: 4 RRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIV 183
RRT+ +QYKK K+ AQG+RRYDRKQ GYGGQ+KPIF IV
Sbjct: 8 RRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIV 67
Query: 184 LRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 294
LRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 68 LRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>AL035422-5|CAI42360.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 117 bits (282), Expect = 8e-27
Identities = 56/99 (56%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Frame = +1
Query: 4 RRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIV 183
RRT+ +QYKK K+ AQG+RRYDRKQ GYGGQ+KPIF IV
Sbjct: 8 RRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIV 67
Query: 184 LRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 294
LRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 68 LRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>BC058160-1|AAH58160.1| 25|Homo sapiens LOC554234 protein protein.
Length = 25
Score = 44.4 bits (100), Expect = 9e-05
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = +1
Query: 223 VALKRCKHFELGGDKKRKGQMIQF 294
+ +KR KHF+LGGDKKRKGQ+IQF
Sbjct: 2 LTIKRYKHFKLGGDKKRKGQVIQF 25
>AL831918-1|CAD38579.1| 810|Homo sapiens hypothetical protein
protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 145 WVWTDHRNPAVYDHNVFYPGQRAFPWTFCTVIPCVL 38
W+W D+ + D N+F F W C+ IP L
Sbjct: 538 WIWHDNMQ-FLQDKNIFEHTYFGFMWQLCSCIPSTL 572
>AJ586138-1|CAE51938.1| 3395|Homo sapiens ubiquitin-specific
proteinase 34 protein.
Length = 3395
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 145 WVWTDHRNPAVYDHNVFYPGQRAFPWTFCTVIPCVL 38
W+W D+ + D N+F F W C+ IP L
Sbjct: 2109 WIWHDNMQ-FLQDKNIFEHTYFGFMWQLCSCIPSTL 2143
>AB011142-1|BAA25496.2| 3412|Homo sapiens KIAA0570 protein protein.
Length = 3412
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 145 WVWTDHRNPAVYDHNVFYPGQRAFPWTFCTVIPCVL 38
W+W D+ + D N+F F W C+ IP L
Sbjct: 2126 WIWHDNMQ-FLQDKNIFEHTYFGFMWQLCSCIPSTL 2160
>BC021709-1|AAH21709.1| 437|Homo sapiens sarcoglycan, epsilon
protein.
Length = 437
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 5/32 (15%)
Frame = -3
Query: 292 IGSSVPFSSC-----HHQAQSACISSMQPVIS 212
+G+ VPFSSC + Q Q C M+PVI+
Sbjct: 226 VGADVPFSSCLREVENPQNQLRCSQEMEPVIT 257
>AY359042-1|AAQ89401.1| 437|Homo sapiens SGCE protein.
Length = 437
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 5/32 (15%)
Frame = -3
Query: 292 IGSSVPFSSC-----HHQAQSACISSMQPVIS 212
+G+ VPFSSC + Q Q C M+PVI+
Sbjct: 226 VGADVPFSSCLREVENPQNQLRCSQEMEPVIT 257
>AL022327-1|CAO03519.1| 336|Homo sapiens novel protein (FLJ41993)
protein.
Length = 336
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = -2
Query: 293 NWIICPF---LFLSPPSSKCLHLFNATCDLTLQSAHSR 189
+W+ CPF F +PP+S+C + + +AHSR
Sbjct: 280 SWVRCPFEQRRFPTPPTSRCTCVTGGSHSSLPANAHSR 317
>AK123987-1|BAC85743.1| 336|Homo sapiens egion. protein.
Length = 336
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = -2
Query: 293 NWIICPF---LFLSPPSSKCLHLFNATCDLTLQSAHSR 189
+W+ CPF F +PP+S+C + + +AHSR
Sbjct: 280 SWVRCPFEQRRFPTPPTSRCTCVTGGSHSSLPANAHSR 317
>AJ000534-1|CAA04167.1| 437|Homo sapiens epsilon-sarcoglycan
protein.
Length = 437
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 5/32 (15%)
Frame = -3
Query: 292 IGSSVPFSSC-----HHQAQSACISSMQPVIS 212
+G+ VPFSSC + Q Q C M+PVI+
Sbjct: 226 VGADVPFSSCLREVENPQNQLRCSQEMEPVIT 257
>AF516515-1|AAM64204.1| 437|Homo sapiens mutant epsilon-sarcoglycan
protein.
Length = 437
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 5/32 (15%)
Frame = -3
Query: 292 IGSSVPFSSC-----HHQAQSACISSMQPVIS 212
+G+ VPFSSC + Q Q C M+PVI+
Sbjct: 226 VGADVPFSSCLREVENPQNQLRCSQEMEPVIT 257
>AF036364-1|AAC04368.1| 413|Homo sapiens epsilon-sarcoglycan
protein.
Length = 413
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 5/32 (15%)
Frame = -3
Query: 292 IGSSVPFSSC-----HHQAQSACISSMQPVIS 212
+G+ VPFSSC + Q Q C M+PVI+
Sbjct: 202 VGADVPFSSCLREVENPQNQLRCSQEMEPVIT 233
>AC069292-1|AAS07485.1| 437|Homo sapiens unknown protein.
Length = 437
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 5/32 (15%)
Frame = -3
Query: 292 IGSSVPFSSC-----HHQAQSACISSMQPVIS 212
+G+ VPFSSC + Q Q C M+PVI+
Sbjct: 226 VGADVPFSSCLREVENPQNQLRCSQEMEPVIT 257
>AB117974-1|BAD21206.1| 427|Homo sapiens brain epsilon-sarcoglycan
protein.
Length = 427
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 5/32 (15%)
Frame = -3
Query: 292 IGSSVPFSSC-----HHQAQSACISSMQPVIS 212
+G+ VPFSSC + Q Q C M+PVI+
Sbjct: 202 VGADVPFSSCLREVENPQNQLRCSQEMEPVIT 233
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,219,024
Number of Sequences: 237096
Number of extensions: 909404
Number of successful extensions: 2065
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2049
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1736741460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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