Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS334D01f
         (440 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    26   0.52 
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   3.6  
AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    23   4.8  

>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 26.2 bits (55), Expect = 0.52
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +3

Query: 201  GGKIMLGLIVGQVPVMLQSEDWKRRHAALMAVSSAGEGCHKQMEQ 335
            G K   G  V     ++QSE +  RH   + +S AG+ C +QM+Q
Sbjct: 1489 GEKCQGGSHVSMKGKLIQSEPY--RH--FLRISEAGQSCKEQMDQ 1529


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = -3

Query: 363 EQQ*QLGRASVPSVYDTLHQLRRQPSRQHGVSSNLQ 256
           +QQ QL R +V        Q +RQP RQ    S  Q
Sbjct: 288 QQQRQLQRQAVGIAQHQQQQQQRQPQRQAVAGSQQQ 323


>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 15/52 (28%), Positives = 23/52 (44%)
 Frame = -1

Query: 341 EHLFHLFMTPFTS*GDSHQGSMASLPIFRLQHYRYLSHNKSQHYLATKTTAH 186
           EH  HL  + F       QGS A   + +L H R  +  +++ Y+     AH
Sbjct: 23  EHREHLHESGFVR----RQGSHAKSSVHKLCHARNTTQPRTRWYIPAFFAAH 70


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 487,981
Number of Sequences: 2352
Number of extensions: 9845
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36993357
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)