Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS334D01f
(440 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006624-8|AAF39782.2| 1092|Caenorhabditis elegans Importin beta... 128 1e-30
Z83120-2|CAB05586.1| 883|Caenorhabditis elegans Hypothetical pr... 34 0.040
L29440-1|AAA98752.1| 570|Caenorhabditis elegans endoprotease pr... 32 0.21
L29439-1|AAA98751.1| 658|Caenorhabditis elegans endoprotease pr... 32 0.21
L29438-1|AAA98750.1| 684|Caenorhabditis elegans endoprotease pr... 32 0.21
AF039719-6|AAO12410.1| 666|Caenorhabditis elegans Blistered cut... 32 0.21
AF039719-5|AAB96755.1| 699|Caenorhabditis elegans Blistered cut... 32 0.21
AF039719-4|AAB96753.1| 670|Caenorhabditis elegans Blistered cut... 32 0.21
AF039719-3|AAB96756.1| 730|Caenorhabditis elegans Blistered cut... 32 0.21
AF039719-2|AAB96757.1| 827|Caenorhabditis elegans Blistered cut... 32 0.21
AF039719-1|AAB96754.1| 942|Caenorhabditis elegans Blistered cut... 32 0.21
Z69661-2|CAA93494.1| 925|Caenorhabditis elegans Hypothetical pr... 28 2.6
Z81479-11|CAB03937.2| 1441|Caenorhabditis elegans Hypothetical p... 28 3.5
Z73423-8|CAO82012.1| 1441|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z68215-14|CAL49436.1| 394|Caenorhabditis elegans Hypothetical p... 28 3.5
Z68215-13|CAL49435.1| 382|Caenorhabditis elegans Hypothetical p... 28 3.5
Z68215-12|CAA92455.2| 368|Caenorhabditis elegans Hypothetical p... 28 3.5
Z68215-10|CAC42269.1| 399|Caenorhabditis elegans Hypothetical p... 28 3.5
Z68215-9|CAC42270.1| 384|Caenorhabditis elegans Hypothetical pr... 28 3.5
AM231684-1|CAJ77753.1| 384|Caenorhabditis elegans GDP-mannose 4... 28 3.5
AM231683-1|CAJ77752.1| 399|Caenorhabditis elegans GDP-mannose 4... 28 3.5
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 28 3.5
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 28 3.5
Z81491-12|CAI46569.1| 177|Caenorhabditis elegans Hypothetical p... 27 6.0
U28991-14|AAA68388.1| 352|Caenorhabditis elegans Hypothetical p... 27 6.0
U28991-13|AAA68387.1| 281|Caenorhabditis elegans Hypothetical p... 27 6.0
Z71178-6|CAA94880.2| 1185|Caenorhabditis elegans Hypothetical pr... 27 8.0
AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg (sp... 27 8.0
>AC006624-8|AAF39782.2| 1092|Caenorhabditis elegans Importin beta
family protein 3 protein.
Length = 1092
Score = 128 bits (310), Expect = 1e-30
Identities = 60/145 (41%), Positives = 92/145 (63%), Gaps = 2/145 (1%)
Frame = +3
Query: 9 ETAPAMVRKQVPNAVSMLTPLVLEMMCELDEEP--DWTIXXXXXXXXXXXXYVAAESALD 182
E+AP ++K P A+ + +L M E+D++ +W + + AESA+D
Sbjct: 283 ESAPKGLKKYAPGALGPILETLLSCMTEMDDDVLNEW-LNEIEEEEDYEDIPIIAESAID 341
Query: 183 RMCCGLGGKIMLGLIVGQVPVMLQSEDWKRRHAALMAVSSAGEGCHKQMEQMLDQVVTAV 362
R+ C + GK+ML + + V +L SEDWK +HAAL A S+ GEGC + ME ++Q++ +
Sbjct: 342 RVACCINGKVMLPVFLPLVEKLLTSEDWKMKHAALRAFSAVGEGCQRSMEPHIEQIMAHI 401
Query: 363 LNYLSDPHPRVRYAACNAVGQMSTD 437
NY++D HPRV+YAACNA+GQMS+D
Sbjct: 402 TNYVNDAHPRVQYAACNAIGQMSSD 426
>Z83120-2|CAB05586.1| 883|Caenorhabditis elegans Hypothetical
protein R06A4.4a protein.
Length = 883
Score = 34.3 bits (75), Expect = 0.040
Identities = 17/77 (22%), Positives = 38/77 (49%)
Frame = +3
Query: 204 GKIMLGLIVGQVPVMLQSEDWKRRHAALMAVSSAGEGCHKQMEQMLDQVVTAVLNYLSDP 383
GK +L + + L +++W + + ++A+ + EGC + L +++ +L + D
Sbjct: 381 GKDLLDKLFPLLKDTLMNDNWLVKESGILALGAIAEGCMDGVVPHLGELIPFMLAMMFDK 440
Query: 384 HPRVRYAACNAVGQMST 434
P VR C + + S+
Sbjct: 441 KPLVRSITCWTLSRYSS 457
>L29440-1|AAA98752.1| 570|Caenorhabditis elegans endoprotease
protein.
Length = 570
Score = 31.9 bits (69), Expect = 0.21
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 301 EETAIKAAWRLFQSSDCNITGTCPTISPSIILPPRPQHMRSN 176
E + A R + D +T P+ + S++LPPRPQ +N
Sbjct: 164 EHVQVHATVRYLKRGDLKLTLFSPSGTRSVLLPPRPQDFNAN 205
>L29439-1|AAA98751.1| 658|Caenorhabditis elegans endoprotease
protein.
Length = 658
Score = 31.9 bits (69), Expect = 0.21
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 301 EETAIKAAWRLFQSSDCNITGTCPTISPSIILPPRPQHMRSN 176
E + A R + D +T P+ + S++LPPRPQ +N
Sbjct: 537 EHVQVHATVRYLKRGDLKLTLFSPSGTRSVLLPPRPQDFNAN 578
>L29438-1|AAA98750.1| 684|Caenorhabditis elegans endoprotease
protein.
Length = 684
Score = 31.9 bits (69), Expect = 0.21
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 301 EETAIKAAWRLFQSSDCNITGTCPTISPSIILPPRPQHMRSN 176
E + A R + D +T P+ + S++LPPRPQ +N
Sbjct: 537 EHVQVHATVRYLKRGDLKLTLFSPSGTRSVLLPPRPQDFNAN 578
>AF039719-6|AAO12410.1| 666|Caenorhabditis elegans Blistered
cuticle protein 4, isoformf protein.
Length = 666
Score = 31.9 bits (69), Expect = 0.21
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 301 EETAIKAAWRLFQSSDCNITGTCPTISPSIILPPRPQHMRSN 176
E + A R + D +T P+ + S++LPPRPQ +N
Sbjct: 537 EHVQVHATVRYLKRGDLKLTLFSPSGTRSVLLPPRPQDFNAN 578
>AF039719-5|AAB96755.1| 699|Caenorhabditis elegans Blistered
cuticle protein 4, isoforme protein.
Length = 699
Score = 31.9 bits (69), Expect = 0.21
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 301 EETAIKAAWRLFQSSDCNITGTCPTISPSIILPPRPQHMRSN 176
E + A R + D +T P+ + S++LPPRPQ +N
Sbjct: 537 EHVQVHATVRYLKRGDLKLTLFSPSGTRSVLLPPRPQDFNAN 578
>AF039719-4|AAB96753.1| 670|Caenorhabditis elegans Blistered
cuticle protein 4, isoforma protein.
Length = 670
Score = 31.9 bits (69), Expect = 0.21
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 301 EETAIKAAWRLFQSSDCNITGTCPTISPSIILPPRPQHMRSN 176
E + A R + D +T P+ + S++LPPRPQ +N
Sbjct: 537 EHVQVHATVRYLKRGDLKLTLFSPSGTRSVLLPPRPQDFNAN 578
>AF039719-3|AAB96756.1| 730|Caenorhabditis elegans Blistered
cuticle protein 4, isoformb protein.
Length = 730
Score = 31.9 bits (69), Expect = 0.21
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 301 EETAIKAAWRLFQSSDCNITGTCPTISPSIILPPRPQHMRSN 176
E + A R + D +T P+ + S++LPPRPQ +N
Sbjct: 537 EHVQVHATVRYLKRGDLKLTLFSPSGTRSVLLPPRPQDFNAN 578
>AF039719-2|AAB96757.1| 827|Caenorhabditis elegans Blistered
cuticle protein 4, isoformc protein.
Length = 827
Score = 31.9 bits (69), Expect = 0.21
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 301 EETAIKAAWRLFQSSDCNITGTCPTISPSIILPPRPQHMRSN 176
E + A R + D +T P+ + S++LPPRPQ +N
Sbjct: 537 EHVQVHATVRYLKRGDLKLTLFSPSGTRSVLLPPRPQDFNAN 578
>AF039719-1|AAB96754.1| 942|Caenorhabditis elegans Blistered
cuticle protein 4, isoformd protein.
Length = 942
Score = 31.9 bits (69), Expect = 0.21
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 301 EETAIKAAWRLFQSSDCNITGTCPTISPSIILPPRPQHMRSN 176
E + A R + D +T P+ + S++LPPRPQ +N
Sbjct: 537 EHVQVHATVRYLKRGDLKLTLFSPSGTRSVLLPPRPQDFNAN 578
>Z69661-2|CAA93494.1| 925|Caenorhabditis elegans Hypothetical
protein F48F7.4 protein.
Length = 925
Score = 28.3 bits (60), Expect = 2.6
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -3
Query: 402 HNVLGDEGHSGN*EQQ*QLGRASVPSVYDTLHQLRRQPSRQHGVSSN 262
H G+EGHSG EQ Q + + + + RQP R + S N
Sbjct: 581 HMYNGNEGHSGAHEQPQQQQQQRYVNYGNATGERERQPRRDNNYSKN 627
>Z81479-11|CAB03937.2| 1441|Caenorhabditis elegans Hypothetical
protein C34F6.10 protein.
Length = 1441
Score = 27.9 bits (59), Expect = 3.5
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -3
Query: 87 TSSQVQVE*ACSRHWALVYAPWLVLSH 7
T+ VQV A S H AL + W VLSH
Sbjct: 952 TTISVQVRAAVSFHDALTHGDWSVLSH 978
>Z73423-8|CAO82012.1| 1441|Caenorhabditis elegans Hypothetical protein
C34F6.10 protein.
Length = 1441
Score = 27.9 bits (59), Expect = 3.5
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -3
Query: 87 TSSQVQVE*ACSRHWALVYAPWLVLSH 7
T+ VQV A S H AL + W VLSH
Sbjct: 952 TTISVQVRAAVSFHDALTHGDWSVLSH 978
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical
protein K08C7.3b protein.
Length = 3672
Score = 27.9 bits (59), Expect = 3.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 264 NLQIATLQVLVPQ*VPALSCHQDHSTCGPM 175
N T +L PQ +L C +H+TCG M
Sbjct: 301 NGHAVTCDILEPQRPKSLLCRCEHNTCGDM 330
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical
protein K08C7.3a protein.
Length = 3704
Score = 27.9 bits (59), Expect = 3.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 264 NLQIATLQVLVPQ*VPALSCHQDHSTCGPM 175
N T +L PQ +L C +H+TCG M
Sbjct: 301 NGHAVTCDILEPQRPKSLLCRCEHNTCGDM 330
>Z68215-14|CAL49436.1| 394|Caenorhabditis elegans Hypothetical
protein C53B4.7e protein.
Length = 394
Score = 27.9 bits (59), Expect = 3.5
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = -1
Query: 413 IASCITYSGMRVTQVIKNSSNNLVEHLFHLFMTPFTS*GDS----HQGSM 276
+A + G +V +I+ SS+ + HL+ P T GDS H G M
Sbjct: 61 LAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITHHGDSSFSLHYGDM 110
>Z68215-13|CAL49435.1| 382|Caenorhabditis elegans Hypothetical
protein C53B4.7d protein.
Length = 382
Score = 27.9 bits (59), Expect = 3.5
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = -1
Query: 413 IASCITYSGMRVTQVIKNSSNNLVEHLFHLFMTPFTS*GDS----HQGSM 276
+A + G +V +I+ SS+ + HL+ P T GDS H G M
Sbjct: 49 LAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITHHGDSSFSLHYGDM 98
>Z68215-12|CAA92455.2| 368|Caenorhabditis elegans Hypothetical
protein C53B4.7c protein.
Length = 368
Score = 27.9 bits (59), Expect = 3.5
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = -1
Query: 413 IASCITYSGMRVTQVIKNSSNNLVEHLFHLFMTPFTS*GDS----HQGSM 276
+A + G +V +I+ SS+ + HL+ P T GDS H G M
Sbjct: 35 LAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITHHGDSSFSLHYGDM 84
>Z68215-10|CAC42269.1| 399|Caenorhabditis elegans Hypothetical
protein C53B4.7b protein.
Length = 399
Score = 27.9 bits (59), Expect = 3.5
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = -1
Query: 413 IASCITYSGMRVTQVIKNSSNNLVEHLFHLFMTPFTS*GDS----HQGSM 276
+A + G +V +I+ SS+ + HL+ P T GDS H G M
Sbjct: 66 LAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITHHGDSSFSLHYGDM 115
>Z68215-9|CAC42270.1| 384|Caenorhabditis elegans Hypothetical
protein C53B4.7a protein.
Length = 384
Score = 27.9 bits (59), Expect = 3.5
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = -1
Query: 413 IASCITYSGMRVTQVIKNSSNNLVEHLFHLFMTPFTS*GDS----HQGSM 276
+A + G +V +I+ SS+ + HL+ P T GDS H G M
Sbjct: 51 LAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITHHGDSSFSLHYGDM 100
>AM231684-1|CAJ77753.1| 384|Caenorhabditis elegans GDP-mannose
4,6-dehydratase protein.
Length = 384
Score = 27.9 bits (59), Expect = 3.5
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = -1
Query: 413 IASCITYSGMRVTQVIKNSSNNLVEHLFHLFMTPFTS*GDS----HQGSM 276
+A + G +V +I+ SS+ + HL+ P T GDS H G M
Sbjct: 51 LAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITHHGDSSFSLHYGDM 100
>AM231683-1|CAJ77752.1| 399|Caenorhabditis elegans GDP-mannose
4,6-dehydratase protein.
Length = 399
Score = 27.9 bits (59), Expect = 3.5
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = -1
Query: 413 IASCITYSGMRVTQVIKNSSNNLVEHLFHLFMTPFTS*GDS----HQGSM 276
+A + G +V +I+ SS+ + HL+ P T GDS H G M
Sbjct: 66 LAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITHHGDSSFSLHYGDM 115
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 27.9 bits (59), Expect = 3.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 264 NLQIATLQVLVPQ*VPALSCHQDHSTCGPM 175
N T +L PQ +L C +H+TCG M
Sbjct: 301 NGHAVTCDILEPQRPKSLLCRCEHNTCGDM 330
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 27.9 bits (59), Expect = 3.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 264 NLQIATLQVLVPQ*VPALSCHQDHSTCGPM 175
N T +L PQ +L C +H+TCG M
Sbjct: 301 NGHAVTCDILEPQRPKSLLCRCEHNTCGDM 330
>Z81491-12|CAI46569.1| 177|Caenorhabditis elegans Hypothetical
protein D1086.10a protein.
Length = 177
Score = 27.1 bits (57), Expect = 6.0
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -2
Query: 244 TGTCPTISPSIILPPRPQHMRS-NADSAAT 158
TGT PT+ S ++ P P+ S + DS +T
Sbjct: 25 TGTSPTVDTSAVIAPNPESSPSQSTDSPST 54
>U28991-14|AAA68388.1| 352|Caenorhabditis elegans Hypothetical
protein F08F8.1 protein.
Length = 352
Score = 27.1 bits (57), Expect = 6.0
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1
Query: 59 HAHGIGHLFTHHGW 18
H HG GH F HHG+
Sbjct: 181 HHHGFGHGFGHHGF 194
>U28991-13|AAA68387.1| 281|Caenorhabditis elegans Hypothetical
protein F08F8.5 protein.
Length = 281
Score = 27.1 bits (57), Expect = 6.0
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1
Query: 59 HAHGIGHLFTHHGW 18
H HG GH F HHG+
Sbjct: 255 HHHGFGHGFGHHGF 268
>Z71178-6|CAA94880.2| 1185|Caenorhabditis elegans Hypothetical
protein B0024.8 protein.
Length = 1185
Score = 26.6 bits (56), Expect = 8.0
Identities = 15/68 (22%), Positives = 30/68 (44%)
Frame = +3
Query: 228 VGQVPVMLQSEDWKRRHAALMAVSSAGEGCHKQMEQMLDQVVTAVLNYLSDPHPRVRYAA 407
V Q + S++W + L +S+ E + + L +V+ A+LN + V A
Sbjct: 706 VNQALKKMSSDEWADKVDGLNMISTLSETQPRMVADNLKEVIIAILNECKNLRSSVSRVA 765
Query: 408 CNAVGQMS 431
+G ++
Sbjct: 766 IVTIGTVA 773
>AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg
(spastic paraplegia)protein 7 protein.
Length = 782
Score = 26.6 bits (56), Expect = 8.0
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +3
Query: 168 ESALDRMCCGLGGKIMLGLIVGQVPVMLQSEDWKRRHAALMAVSSAG 308
+ LDRMC LGG++ + G++ Q + K A V G
Sbjct: 604 DQLLDRMCMTLGGRVAEEIFFGRITTGAQDDLQKVTQMAYSQVVKFG 650
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,379,079
Number of Sequences: 27780
Number of extensions: 210350
Number of successful extensions: 662
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 756625558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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