Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS334C08f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   1.2  
DQ388479-1|ABD43194.1|   79|Anopheles gambiae adipokinetic hormo...    24   2.7  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    23   6.2  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 13/61 (21%), Positives = 31/61 (50%)
 Frame = -1

Query: 266 ERQMSNAAKRGGRLCLFVARCALSLALQASNGTPQ*VMFFRACSRLHRILRRCHVKKAIN 87
           +R +S ++ RGG + L V+    S+ L + + + + +    AC+  H  +   ++   ++
Sbjct: 136 DRSLSGSSSRGGGVLLAVSNAYESIELPSRDRSLEYICVRVACNNAHLYVMVVYIPPQLS 195

Query: 86  S 84
           S
Sbjct: 196 S 196


>DQ388479-1|ABD43194.1|   79|Anopheles gambiae adipokinetic hormone
           I preproprotein protein.
          Length = 79

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -2

Query: 226 CASLSLVARSRLHFKPQMERLNESCFFVRAAGS 128
           CASL L+  ++L F P   + ++    +   GS
Sbjct: 13  CASLMLITEAQLTFTPAWGKRSQGAMGINPLGS 45


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -2

Query: 400 YRNYRCYKQL 371
           Y N++CYKQL
Sbjct: 5   YHNFQCYKQL 14


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 553,588
Number of Sequences: 2352
Number of extensions: 10778
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)