Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS334C01f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4YKJ0 Cluster: Putative uncharacterized protein; n=2; ...    35   0.98 
UniRef50_Q2QEH8 Cluster: Histone acetyltransferase; n=1; Toxopla...    33   4.0  
UniRef50_Q5UNW2 Cluster: Uncharacterized protein R706; n=1; Acan...    33   4.0  
UniRef50_A3RR02 Cluster: GspH; n=7; Burkholderiaceae|Rep: GspH -...    33   5.2  

>UniRef50_Q4YKJ0 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 486

 Score = 35.1 bits (77), Expect = 0.98
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = +2

Query: 392 ERFIYVISTYY*SKHKHVFLINSIHRKHSVTFSXT 496
           ER+I +++ Y   K+K++FLINS H   +V +  T
Sbjct: 87  ERYIDLLNKYQEEKNKYIFLINSCHENENVKYKYT 121


>UniRef50_Q2QEH8 Cluster: Histone acetyltransferase; n=1; Toxoplasma
           gondii|Rep: Histone acetyltransferase - Toxoplasma
           gondii
          Length = 459

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +3

Query: 141 KFGAYLSETWIFSHYFFHMCDVNILNLPRGALV*IRHYNEI 263
           +FG +L +TW FS Y  H+ D  +L +    L   RH +E+
Sbjct: 172 QFGPFLLQTWYFSPYPAHVQDAEVLYVCEFCLSFFRHASEL 212


>UniRef50_Q5UNW2 Cluster: Uncharacterized protein R706; n=1;
           Acanthamoeba polyphaga mimivirus|Rep: Uncharacterized
           protein R706 - Mimivirus
          Length = 420

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 19/86 (22%), Positives = 38/86 (44%)
 Frame = +2

Query: 101 DYFYWYIPTHVTQKVWRLSI*NLDFQSLFFSYVRR*HSKSPARSASVDSALQ*NLQNANL 280
           D+F    PT + Q ++   +  +D + ++   V +   K        +  L  N+   N+
Sbjct: 78  DFFLEVFPTEIAQDIYSDDVPEIDHKEMYIEEVVKLFKKLFRYDPKKNRVLMNNI-TKNI 136

Query: 281 KTHTKFTCEFVKQRLQNRTADVGSLA 358
           + H     ++ K  + NRTAD+  +A
Sbjct: 137 RLHYIDIRDYYKNNVHNRTADMNIIA 162


>UniRef50_A3RR02 Cluster: GspH; n=7; Burkholderiaceae|Rep: GspH -
           Ralstonia solanacearum UW551
          Length = 192

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 16/34 (47%), Positives = 24/34 (70%)
 Frame = +3

Query: 288 TPNSRASLLNNAYRIARLTLVA*QSEANLPSRPI 389
           TPN R+ L ++A ++ARL  +A Q EA L +RP+
Sbjct: 68  TPNPRSQLADDAQKLARLIELA-QEEAQLTARPV 100


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 478,910,328
Number of Sequences: 1657284
Number of extensions: 8969686
Number of successful extensions: 17817
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17801
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)