Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS334C01f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protei...    25   2.0  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   8.2  

>Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protein
           precursor protein.
          Length = 260

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -2

Query: 439 LMLRSIISAYDIYKAFKIGRDGRFASLC*ATNVSRAIL 326
           +M RS+  +       K GR+ +F  LC A+   R+I+
Sbjct: 221 IMDRSVYQSGPTASQCKTGRNSKFPGLCNASEEPRSIM 258


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = +2

Query: 221 PARSASVDSALQ*NLQNANLKTHTKFTCEFVKQRLQNRTADVGSLAERGK 370
           P     +++A Q   +NAN +     T   V+ +LQ   A + S   +GK
Sbjct: 537 PVTRTELETAKQKLQENANEERELTQTLRAVQGKLQESMAAMQSTRSQGK 586


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 517,442
Number of Sequences: 2352
Number of extensions: 9913
Number of successful extensions: 8
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)