Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS334B09f
         (342 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0387 + 24577448-24577638,24580375-24580767,24581078-245812...    28   2.2  
03_06_0228 - 32504637-32505025,32505392-32505449                       26   8.9  

>05_05_0387 +
           24577448-24577638,24580375-24580767,24581078-24581208,
           24581460-24581899
          Length = 384

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -1

Query: 135 SADDRIANSLTHTFKLFKKVPSGSTAHNHYANDG 34
           +++D +A+ L   FKL  K+ S  +A  H+ N+G
Sbjct: 279 TSEDEVADWLIERFKLKNKLLSDFSALGHFPNEG 312


>03_06_0228 - 32504637-32505025,32505392-32505449
          Length = 148

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = -1

Query: 141 WASADDRIAN--SLTHTFKLFKKVPSGSTAHNHYANDGDKYY 22
           W  A D+  +   +TH FK+FKK        N  A+  +K Y
Sbjct: 57  WCKAYDKKRDLAEMTHRFKIFKKNAEALHRSNEGASKYEKIY 98


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,681,810
Number of Sequences: 37544
Number of extensions: 119547
Number of successful extensions: 248
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 248
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 482105440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)