Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS334B09f
         (342 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   1.3  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   4.1  
AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    20   7.2  
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    20   7.2  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    20   9.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    20   9.5  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    20   9.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    20   9.5  
AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor prot...    20   9.5  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
 Frame = +2

Query: 77  TFLKSLKVWVREFAI-RSSAL 136
           T  K +K+W+  FAI R SA+
Sbjct: 389 TIPKEMKIWIPAFAIHRDSAI 409


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 11/36 (30%), Positives = 14/36 (38%)
 Frame = -1

Query: 141 WASADDRIANSLTHTFKLFKKVPSGSTAHNHYANDG 34
           WA   D    S   +FK F K P   T   ++   G
Sbjct: 39  WADDSDEEELSARPSFKTFDKGPKNYTTPVNFVAGG 74


>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -1

Query: 171 SFSLLEYVDCWASADDRIANSLTHTFKL 88
           SF L +  D W        N+ T TFK+
Sbjct: 36  SFELSKNGDEWTFTSSSGDNTYTKTFKM 63


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -1

Query: 171 SFSLLEYVDCWASADDRIANSLTHTFKL 88
           SF L +  D W        N+ T TFK+
Sbjct: 38  SFELSKNGDEWTFTSSSGDNTYTKTFKM 65


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 84  KKVPSGSTAHNHYANDGDKYY 22
           K+V SGST    + ++GD+ +
Sbjct: 337 KQVLSGSTGKVAFDDNGDRIF 357


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 326  SIPVSLFLSWVSQSHP 279
            S P +LF+SW+    P
Sbjct: 1225 SSPQALFISWLPPLEP 1240


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 18  KNSIYRHHLHNDCEL 62
           KN++Y+    N+CE+
Sbjct: 217 KNAVYQCKYGNNCEI 231


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 326  SIPVSLFLSWVSQSHP 279
            S P +LF+SW+    P
Sbjct: 1221 SSPQALFISWLPPLEP 1236


>AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor
          protein.
          Length = 72

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 18 KNSIYRHHLHNDCEL 62
          KN++Y+    N+CE+
Sbjct: 14 KNAVYQCKYGNNCEI 28


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,337
Number of Sequences: 438
Number of extensions: 1350
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7839909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)