Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS334B05f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81568-14|CAB04591.2|  608|Caenorhabditis elegans Hypothetical p...    29   2.0  
Z81030-13|CAB02705.2|  358|Caenorhabditis elegans Hypothetical p...    29   2.0  
AL021487-8|CAB76733.1|  320|Caenorhabditis elegans Hypothetical ...    29   2.0  
AC024881-8|AAK71411.2|  318|Caenorhabditis elegans Serpentine re...    28   4.7  
AC024796-11|AAK29890.2|  828|Caenorhabditis elegans Hypothetical...    27   6.2  

>Z81568-14|CAB04591.2|  608|Caenorhabditis elegans Hypothetical
           protein K08E3.3a protein.
          Length = 608

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 15/74 (20%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
 Frame = +3

Query: 135 VTSDRLLKAYINCFLDKGRCTPEASDFKKALPDTIATNCGKCT-EKQKANVRKVIKVIQQ 311
           ++S ++L++  +  + K   TP++   + A+  T      K + E       +++ V++ 
Sbjct: 520 ISSPKILRSSFSGAIRKSLSTPDSVKVETAVTVTALFEFAKSSAETMSIEQGEILLVLEH 579

Query: 312 KHSTEWEKLVKKHD 353
            H   W +  KKH+
Sbjct: 580 DHGDGWTRTKKKHN 593


>Z81030-13|CAB02705.2|  358|Caenorhabditis elegans Hypothetical
           protein C01G10.3 protein.
          Length = 358

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
 Frame = +1

Query: 358 RENTVLISTNSF*EAKYLLISYFGLGHTYVGMHRLSN--CFIYIAHFLHVL 504
           REN        F ++ + + S FGL    +  HR     CF ++  F+HVL
Sbjct: 226 RENVAQFFQTVFQDSLFFISSTFGLKLNTIIAHRFWTFFCFTFVWQFIHVL 276


>AL021487-8|CAB76733.1|  320|Caenorhabditis elegans Hypothetical
           protein Y45F10B.14 protein.
          Length = 320

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 437 TLMWGCIGLVTASFILLTSYMFYXALY 517
           TL W  IG++    IL  +++ Y ALY
Sbjct: 5   TLYWSVIGVIDVLAILFNAFLIYLALY 31


>AC024881-8|AAK71411.2|  318|Caenorhabditis elegans Serpentine
           receptor, class t protein53 protein.
          Length = 318

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -2

Query: 343 FTSFSHSVECFCCITLITFLTLAFCFSV 260
           +T+  H++  F  + L +FL + FCF V
Sbjct: 192 YTNIPHTINNFSLVFLTSFLYMFFCFKV 219


>AC024796-11|AAK29890.2|  828|Caenorhabditis elegans Hypothetical
           protein Y48G1C.8 protein.
          Length = 828

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = -1

Query: 437 WPKPK*LINKYLAS*KEFVEISTVFSRRIMFLHKFFPFCGMFLLY 303
           W   K L+ +YL +  E +  S   +RR  +L    P  G+F+ +
Sbjct: 399 WAHNKKLLLRYLVNEPELLSQSNCLNRRTPYLPPLIPTTGVFVYF 443


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,095,585
Number of Sequences: 27780
Number of extensions: 190480
Number of successful extensions: 568
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 568
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)