Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS334B02f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U82942-1|AAB41761.1|  120|Homo sapiens anti-gp120 antibody IgG h...    30   5.7  
AK023372-1|BAB14547.1|  159|Homo sapiens protein ( Homo sapiens ...    30   5.7  

>U82942-1|AAB41761.1|  120|Homo sapiens anti-gp120 antibody IgG
           heavy chain V region protein.
          Length = 120

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 20/64 (31%), Positives = 28/64 (43%)
 Frame = -3

Query: 429 ATVPMFESRRRVLIFPMKYELNTSSRMTSTMKE*HRVIKTLIKSNLFYCYTIRHSRRGIN 250
           A +P F S      F  +  +N     T+   E H +  T   + ++YC   RHS R IN
Sbjct: 44  AIIPTFGSTSYAQKFDDRVTINADRSTTTVFMELHSL--TSADTAVYYC--ARHSGRYIN 99

Query: 249 FGYH 238
             YH
Sbjct: 100 GNYH 103


>AK023372-1|BAB14547.1|  159|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13310 fis, clone OVARC1001453. ).
          Length = 159

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -1

Query: 179 TFTCYLFYLFIYTLCTKQNLYTGGLNALGILFQSTIGW 66
           T TCY+  L+ + LC++  L   G+ AL +L+  +  W
Sbjct: 118 TSTCYITCLYKFILCSEPLLPVKGIIALLMLYSGSWAW 155


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,356,231
Number of Sequences: 237096
Number of extensions: 1271000
Number of successful extensions: 1994
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1994
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)