Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS334A12f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U20862-1|AAK29863.2| 253|Caenorhabditis elegans Hypothetical pr... 234 2e-62
AF098996-4|AAC68705.1| 888|Caenorhabditis elegans Hypothetical ... 30 0.87
U23176-4|AAC46716.1| 632|Caenorhabditis elegans Fem-3 mrna bind... 30 1.2
Z80219-7|CAN86594.1| 804|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z80219-6|CAI70409.1| 734|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z80219-5|CAB02302.2| 784|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z80219-4|CAE17938.1| 745|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z80219-1|CAB02301.2| 727|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z75546-12|CAN86896.1| 804|Caenorhabditis elegans Hypothetical p... 29 2.0
Z75546-11|CAI70402.1| 734|Caenorhabditis elegans Hypothetical p... 29 2.0
Z75546-10|CAA99896.2| 784|Caenorhabditis elegans Hypothetical p... 29 2.0
Z75546-9|CAE17895.1| 745|Caenorhabditis elegans Hypothetical pr... 29 2.0
AC024796-10|AAK29896.1| 623|Caenorhabditis elegans Hypothetical... 29 2.0
AF024492-4|AAF98617.1| 848|Caenorhabditis elegans Hypothetical ... 29 2.7
U14634-2|AAA21560.2| 423|Caenorhabditis elegans Hypothetical pr... 28 3.5
U40029-6|AAA81126.1| 490|Caenorhabditis elegans Proteasome regu... 27 6.2
Z81502-2|CAB04106.2| 720|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical pr... 27 8.1
U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical pr... 27 8.1
AL021447-2|CAA16273.2| 807|Caenorhabditis elegans Hypothetical ... 27 8.1
AC006656-6|AAF39879.1| 614|Caenorhabditis elegans Fem-3 mrna bi... 27 8.1
>U20862-1|AAK29863.2| 253|Caenorhabditis elegans Hypothetical
protein W06E11.4 protein.
Length = 253
Score = 234 bits (573), Expect = 2e-62
Identities = 113/174 (64%), Positives = 141/174 (81%), Gaps = 1/174 (0%)
Frame = +1
Query: 1 MSK-IFTPTNQIRLTNVAIVRLKKGGKRFEIACYKNKVLSWRNKLEKDIDEVLQTHTVFT 177
MSK I TPTNQ LTNVA+VR+KK GKRFEIACYKNKV++WRNK EKDIDEVLQTHTVF+
Sbjct: 1 MSKNIKTPTNQKVLTNVAVVRMKKTGKRFEIACYKNKVVNWRNKSEKDIDEVLQTHTVFS 60
Query: 178 NVSKGQVAKKEDLIKIFAKEDQTEICKEILEKGELQVSDKERHSQIDSLFKDIATTVADK 357
NVSKGQ++KKE+LI F EDQ EICK IL+KG+LQVS+KER + D K+++ +A
Sbjct: 61 NVSKGQLSKKEELIAAFGIEDQLEICKIILDKGDLQVSEKERQAASDQSLKEVSQLIASM 120
Query: 358 CVNPETKRPYPVSIIEKAIKDVHFSVNVNKSAKQQALDVIQILKNEIPIERAQM 519
VNPETKRP P S+I+KA++++HFS+ N+S+KQQALD I L+ + IERA+M
Sbjct: 121 VVNPETKRPVPPSVIDKALQEMHFSLKPNRSSKQQALDAIPKLRETLKIERAKM 174
>AF098996-4|AAC68705.1| 888|Caenorhabditis elegans Hypothetical
protein T11F1.8 protein.
Length = 888
Score = 30.3 bits (65), Expect = 0.87
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1
Query: 467 KACCFALLFTLTEKWTSLIAFSIIETGYGRFVSGLTHL 354
K C F L TL E TS++ +++ GR++ L H+
Sbjct: 336 KLCNFQTLITLPENCTSIVGDVVVDANDGRYLYKLFHV 373
>U23176-4|AAC46716.1| 632|Caenorhabditis elegans Fem-3 mrna binding
factor protein 2 protein.
Length = 632
Score = 29.9 bits (64), Expect = 1.2
Identities = 20/89 (22%), Positives = 37/89 (41%)
Frame = +1
Query: 61 LKKGGKRFEIACYKNKVLSWRNKLEKDIDEVLQTHTVFTNVSKGQVAKKEDLIKIFAKED 240
LKK R ++ S K+ + + + TH ++ S G + K D ++ D
Sbjct: 535 LKKLHSRVTKERHRLSRFSSGKKMIETLANLRSTHPIYELQSSGHDSFKTDYFSTASEHD 594
Query: 241 QTEICKEILEKGELQVSDKERHSQIDSLF 327
E+ K +E+G L + + S + F
Sbjct: 595 GPELEKNGIEEGSLMLEPRSNKSSVSVKF 623
>Z80219-7|CAN86594.1| 804|Caenorhabditis elegans Hypothetical
protein T01H8.1e protein.
Length = 804
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 337 ATTVADKCVNPETKRPYPVSIIEKAIKDVHFSVNV--NKSAKQQALDVIQILKNEIPI 504
A +V KC T+R Y V I++KA+ D V++ S Q + + + ++E I
Sbjct: 458 AHSVVHKCQMKATRRKYAVKIVKKAVFDATEEVDILLRHSHHQFVVKLFDVYEDETAI 515
>Z80219-6|CAI70409.1| 734|Caenorhabditis elegans Hypothetical
protein T01H8.1d protein.
Length = 734
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 337 ATTVADKCVNPETKRPYPVSIIEKAIKDVHFSVNV--NKSAKQQALDVIQILKNEIPI 504
A +V KC T+R Y V I++KA+ D V++ S Q + + + ++E I
Sbjct: 445 AHSVVHKCQMKATRRKYAVKIVKKAVFDATEEVDILLRHSHHQFVVKLFDVYEDETAI 502
>Z80219-5|CAB02302.2| 784|Caenorhabditis elegans Hypothetical
protein T01H8.1a protein.
Length = 784
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 337 ATTVADKCVNPETKRPYPVSIIEKAIKDVHFSVNV--NKSAKQQALDVIQILKNEIPI 504
A +V KC T+R Y V I++KA+ D V++ S Q + + + ++E I
Sbjct: 464 AHSVVHKCQMKATRRKYAVKIVKKAVFDATEEVDILLRHSHHQFVVKLFDVYEDETAI 521
>Z80219-4|CAE17938.1| 745|Caenorhabditis elegans Hypothetical
protein T01H8.1c protein.
Length = 745
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 337 ATTVADKCVNPETKRPYPVSIIEKAIKDVHFSVNV--NKSAKQQALDVIQILKNEIPI 504
A +V KC T+R Y V I++KA+ D V++ S Q + + + ++E I
Sbjct: 425 AHSVVHKCQMKATRRKYAVKIVKKAVFDATEEVDILLRHSHHQFVVKLFDVYEDETAI 482
>Z80219-1|CAB02301.2| 727|Caenorhabditis elegans Hypothetical
protein T01H8.1b protein.
Length = 727
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 337 ATTVADKCVNPETKRPYPVSIIEKAIKDVHFSVNV--NKSAKQQALDVIQILKNEIPI 504
A +V KC T+R Y V I++KA+ D V++ S Q + + + ++E I
Sbjct: 407 AHSVVHKCQMKATRRKYAVKIVKKAVFDATEEVDILLRHSHHQFVVKLFDVYEDETAI 464
>Z75546-12|CAN86896.1| 804|Caenorhabditis elegans Hypothetical
protein T01H8.1e protein.
Length = 804
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 337 ATTVADKCVNPETKRPYPVSIIEKAIKDVHFSVNV--NKSAKQQALDVIQILKNEIPI 504
A +V KC T+R Y V I++KA+ D V++ S Q + + + ++E I
Sbjct: 458 AHSVVHKCQMKATRRKYAVKIVKKAVFDATEEVDILLRHSHHQFVVKLFDVYEDETAI 515
>Z75546-11|CAI70402.1| 734|Caenorhabditis elegans Hypothetical
protein T01H8.1d protein.
Length = 734
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 337 ATTVADKCVNPETKRPYPVSIIEKAIKDVHFSVNV--NKSAKQQALDVIQILKNEIPI 504
A +V KC T+R Y V I++KA+ D V++ S Q + + + ++E I
Sbjct: 445 AHSVVHKCQMKATRRKYAVKIVKKAVFDATEEVDILLRHSHHQFVVKLFDVYEDETAI 502
>Z75546-10|CAA99896.2| 784|Caenorhabditis elegans Hypothetical
protein T01H8.1a protein.
Length = 784
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 337 ATTVADKCVNPETKRPYPVSIIEKAIKDVHFSVNV--NKSAKQQALDVIQILKNEIPI 504
A +V KC T+R Y V I++KA+ D V++ S Q + + + ++E I
Sbjct: 464 AHSVVHKCQMKATRRKYAVKIVKKAVFDATEEVDILLRHSHHQFVVKLFDVYEDETAI 521
>Z75546-9|CAE17895.1| 745|Caenorhabditis elegans Hypothetical
protein T01H8.1c protein.
Length = 745
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 337 ATTVADKCVNPETKRPYPVSIIEKAIKDVHFSVNV--NKSAKQQALDVIQILKNEIPI 504
A +V KC T+R Y V I++KA+ D V++ S Q + + + ++E I
Sbjct: 425 AHSVVHKCQMKATRRKYAVKIVKKAVFDATEEVDILLRHSHHQFVVKLFDVYEDETAI 482
>AC024796-10|AAK29896.1| 623|Caenorhabditis elegans Hypothetical
protein Y48G1C.7 protein.
Length = 623
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +1
Query: 205 KEDLIKIFAKEDQTEICKEILEKGELQVSDK 297
+ED++++ A+ E+ K ILEK +QV+ K
Sbjct: 300 REDVLRLLARMTPAEVAKVILEKYGIQVNTK 330
>AF024492-4|AAF98617.1| 848|Caenorhabditis elegans Hypothetical
protein F14F9.3 protein.
Length = 848
Score = 28.7 bits (61), Expect = 2.7
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Frame = +1
Query: 238 DQTEICKEIL---EKGELQVSDKERHSQIDSLFKDIA-TTVADKCVNPETK-RPYPVSII 402
D E+ ++L +GE + KERH + L+KDI V DK + E + I
Sbjct: 30 DPEELANQVLFDKPRGEKRWLGKERHKGKERLYKDIKDKNVMDKTIQLEANLSKNAIKKI 89
Query: 403 EKAIKD-VHFSV--NVNKSAKQQALDVIQIL 486
E + D F+V ++ K + + +D + +L
Sbjct: 90 ESSTADGFQFNVAYSLEKKNRWETVDSVSLL 120
>U14634-2|AAA21560.2| 423|Caenorhabditis elegans Hypothetical
protein T15B12.2 protein.
Length = 423
Score = 28.3 bits (60), Expect = 3.5
Identities = 24/110 (21%), Positives = 48/110 (43%)
Frame = +1
Query: 61 LKKGGKRFEIACYKNKVLSWRNKLEKDIDEVLQTHTVFTNVSKGQVAKKEDLIKIFAKED 240
L+ GK+ + ++ + W KLE+ + E + V T KG+ + +K AK D
Sbjct: 302 LRTAGKKMAPSDSSDETMDWTGKLEQLLKEANKNKAVGT--PKGEETLLYERLK--AKRD 357
Query: 241 QTEICKEILEKGELQVSDKERHSQIDSLFKDIATTVADKCVNPETKRPYP 390
+ ++ + ++ E++ + + +F D T V+ E P P
Sbjct: 358 R-DMTTDAVKTVEMRATINRDVDASEGMFNDKGLTTRTTLVSVELPPPPP 406
>U40029-6|AAA81126.1| 490|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 5 protein.
Length = 490
Score = 27.5 bits (58), Expect = 6.2
Identities = 20/89 (22%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Frame = +1
Query: 7 KIFTPTNQIRLTNVAIVRLKKGGKRFEIACYKNKV-------LSWRNKLEKDIDEVLQTH 165
KI+ + RLT++ + +L++ GK E A ++ + R K++ +++ ++
Sbjct: 157 KIYVEVERARLTSMVVKKLEREGKLDEAATMLLELQVETYGSMEMREKVQYLLEQ-MRYS 215
Query: 166 TVFTNVSKGQVAKKEDLIKIFAKEDQTEI 252
V + + + K+ IK F K D+ E+
Sbjct: 216 LVRNDFVRATIISKKINIKFFNKSDEDEV 244
>Z81502-2|CAB04106.2| 720|Caenorhabditis elegans Hypothetical
protein F14B6.2 protein.
Length = 720
Score = 27.1 bits (57), Expect = 8.1
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 1/119 (0%)
Frame = +1
Query: 22 TNQIRLTNVAIVRLKKGGKRFEIACYKNKVLSWRNKLEK-DIDEVLQTHTVFTNVSKGQV 198
T + LTN IV+L G+ E K K + RN++EK DE N + V
Sbjct: 184 TTMVTLTNTQIVQLS--GE--ETGVVKMKTI--RNRVEKVGSDEEQFIEIDIANAPRIYV 237
Query: 199 AKKEDLIKIFAKEDQTEICKEILEKGELQVSDKERHSQIDSLFKDIATTVADKCVNPET 375
+K + +E+ ++ KE+ + E + KE+ + L K T A+K +N T
Sbjct: 238 SKIKSRHG-GEEEEHFDLLKELKKDEEEKEKKKEKKKKGKGLKKAKKLTEAEKLLNNST 295
>Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical
protein T01G5.7 protein.
Length = 332
Score = 27.1 bits (57), Expect = 8.1
Identities = 26/98 (26%), Positives = 45/98 (45%)
Frame = +1
Query: 7 KIFTPTNQIRLTNVAIVRLKKGGKRFEIACYKNKVLSWRNKLEKDIDEVLQTHTVFTNVS 186
+I Q+R T ++ + G+ N +R++LE +E+ QT+T+F
Sbjct: 109 EIMKKDKQLRTTEEQLIMMANLGEELG-----NDAKRYRSELESAHEELYQTYTIFDK-- 161
Query: 187 KGQVAKKEDLIKIFAKEDQTEICKEILEKGELQVSDKE 300
+K DL ++ E+QT K++ E Q S KE
Sbjct: 162 -----EKSDLCELI--EEQT---KKLTESNAKQESRKE 189
>Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical
protein K07C5.6 protein.
Length = 647
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +1
Query: 175 TNVSKGQVAKKEDLIKIFAKEDQTEICKEILEKGELQVSDKERHSQIDSLFKDIATTVAD 354
T+ +KG E++ K+ ++TE+ KE EK E + D+ D+ + V++
Sbjct: 441 TSAAKGTTTSNEEIFKVPKLVEKTEV-KEEKEK-EDSIKDEVAEENSDNDNDEEKEKVSE 498
Query: 355 KCVNP 369
K ++P
Sbjct: 499 KSISP 503
>U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical
protein W03A5.1 protein.
Length = 832
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = +1
Query: 169 VFTNVSKGQVAKKEDLIKIFAKEDQTEICKEILEKGELQVSDKERHSQIDSLFKDIATTV 348
+ T KGQ K E+LIKI ++ ++ C + + D R+ F + +
Sbjct: 237 ILTERDKGQDDKLEELIKIERQKSRSNQCLSLPKSAPHNDDDGRRY------FCKLLKQI 290
Query: 349 ADKCVNPETK 378
A K NP+ +
Sbjct: 291 AQKTANPKPR 300
>AL021447-2|CAA16273.2| 807|Caenorhabditis elegans Hypothetical
protein F19B2.6 protein.
Length = 807
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +1
Query: 94 CYKNKVLSWRNKLEKDIDEVLQTHTVFTNVSKGQVAKKEDLIKIFAKEDQTEICKEILEK 273
C+ N+ + + + DEV + F N + ++K + L+K + + KE+ EK
Sbjct: 612 CFTNQQVIGTFNIIRSYDEVQEGFAQFENDKQNIISKVDYLMKTDRNLKKLRMAKEVSEK 671
Query: 274 -GELQVSDKERHSQID 318
E +DK+ + D
Sbjct: 672 QWEQFETDKKNRKEDD 687
>AC006656-6|AAF39879.1| 614|Caenorhabditis elegans Fem-3 mrna
binding factor protein 1 protein.
Length = 614
Score = 27.1 bits (57), Expect = 8.1
Identities = 19/78 (24%), Positives = 35/78 (44%)
Frame = +1
Query: 55 VRLKKGGKRFEIACYKNKVLSWRNKLEKDIDEVLQTHTVFTNVSKGQVAKKEDLIKIFAK 234
V LKK R ++ S K+ + + + TH ++ S G + K D ++
Sbjct: 531 VWLKKLHSRVTKERHRLSRFSSGKKMIETLAHLRSTHPIYGLQSSGHESFKTDCFSTASE 590
Query: 235 EDQTEICKEILEKGELQV 288
D E+ K +E+G L++
Sbjct: 591 HDGLELEKNGIEEGNLRL 608
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.131 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,679,803
Number of Sequences: 27780
Number of extensions: 205190
Number of successful extensions: 764
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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