Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS334A12f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   4.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   4.4  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   5.8  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   5.8  
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    21   7.7  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    21   7.7  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -1

Query: 152 TSSMSFSSLFRQDSTLFL*QAISNLFPPFF 63
           T++ S + L+R D+      AI  ++P +F
Sbjct: 141 TTAFSIAVLYRPDTKYMKFPAIYEIYPNYF 170



 Score = 21.0 bits (42), Expect = 7.7
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -3

Query: 420 IFDCLLYYRNWIWSFCFWIDTFISY 346
           IFD LLY R    S   W D   +Y
Sbjct: 39  IFDLLLYVRQADLSDAEWYDVGRNY 63


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -1

Query: 152 TSSMSFSSLFRQDSTLFL*QAISNLFPPFF 63
           T++ S + L+R D+      AI  ++P +F
Sbjct: 141 TTAFSIAVLYRPDTKYMKFPAIYEIYPNYF 170



 Score = 21.0 bits (42), Expect = 7.7
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -3

Query: 420 IFDCLLYYRNWIWSFCFWIDTFISY 346
           IFD LLY R    S   W D   +Y
Sbjct: 39  IFDLLLYVRQADLSDAEWYDVGRNY 63


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 208 EDLIKIFAKEDQTEICKEILEKGELQVSDKERH 306
           +DLIK     D+    +EI EK  +  +  E H
Sbjct: 71  DDLIKAIIDSDRHSTTREIAEKLHVSHTCIENH 103


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 188 KDKLQRKKT**RFLPKKIKRRYAKKF 265
           KD+  RK    R + +   RRY+K+F
Sbjct: 3   KDECDRKSLSQRKIIRSRSRRYSKRF 28


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 133 EKDIDEVLQTHTVFTNVSK 189
           + DID +LQ   + TN  K
Sbjct: 27  DMDIDRILQNGRILTNYIK 45


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 133 EKDIDEVLQTHTVFTNVSK 189
           + DID +LQ   + TN  K
Sbjct: 27  DMDIDRILQNGRILTNYIK 45


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.316    0.131    0.360 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,445
Number of Sequences: 438
Number of extensions: 2286
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)