Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS334A11f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2809|AAF53588.1| 1441|Drosophila melanogaster CG15134-P...    35   0.077
BT010308-1|AAQ23626.1|  680|Drosophila melanogaster AT31531p pro...    28   8.8  
AE014296-2302|AAN11829.1|  680|Drosophila melanogaster CG10743-P...    28   8.8  
AE014296-2301|AAF49801.1|  680|Drosophila melanogaster CG10743-P...    28   8.8  

>AE014134-2809|AAF53588.1| 1441|Drosophila melanogaster CG15134-PA
            protein.
          Length = 1441

 Score = 34.7 bits (76), Expect = 0.077
 Identities = 23/72 (31%), Positives = 31/72 (43%)
 Frame = +1

Query: 211  EALG*LLANPTPPGLSPCSSTCPGKTGKGRQ*SLKHKKRSFSQSNLVKLNASFVNVLDSV 390
            E +  +LA P P GL+P     P    K R  S   K RS  +S   KL  + +N   S 
Sbjct: 975  ETMPTMLARPRPGGLAPIIQLTPSPNAKNRPQSFAQKLRSTGKSVKGKLGYTNLNESSSS 1034

Query: 391  KVNSNTTAPLAE 426
             +  + T  L E
Sbjct: 1035 PLRDSPTMSLHE 1046


>BT010308-1|AAQ23626.1|  680|Drosophila melanogaster AT31531p
           protein.
          Length = 680

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = +1

Query: 247 PGLSPCSSTCPGKTGKGRQ*SLKHKKRSFSQSNL 348
           PG  P S T   K  K  Q SLK +K S SQS++
Sbjct: 615 PGYQPLSITAKLKPVKRTQFSLKRRKSSKSQSDV 648


>AE014296-2302|AAN11829.1|  680|Drosophila melanogaster CG10743-PB,
           isoform B protein.
          Length = 680

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = +1

Query: 247 PGLSPCSSTCPGKTGKGRQ*SLKHKKRSFSQSNL 348
           PG  P S T   K  K  Q SLK +K S SQS++
Sbjct: 615 PGYQPLSITAKLKPVKRTQFSLKRRKSSKSQSDV 648


>AE014296-2301|AAF49801.1|  680|Drosophila melanogaster CG10743-PA,
           isoform A protein.
          Length = 680

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = +1

Query: 247 PGLSPCSSTCPGKTGKGRQ*SLKHKKRSFSQSNL 348
           PG  P S T   K  K  Q SLK +K S SQS++
Sbjct: 615 PGYQPLSITAKLKPVKRTQFSLKRRKSSKSQSDV 648


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,608,214
Number of Sequences: 53049
Number of extensions: 350602
Number of successful extensions: 920
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)