Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS334A09f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113475-1|AAM29480.1|  168|Drosophila melanogaster RE43724p pro...   167   1e-41
AE014134-1056|AAF52346.1|  168|Drosophila melanogaster CG5972-PA...   167   1e-41
AF210453-1|AAF21041.1| 4559|Drosophila melanogaster dynein heavy...    28   6.7  
AY060728-1|AAL28276.1|  452|Drosophila melanogaster GH17451p pro...    28   8.8  
AE014297-1606|AAF54885.2|  452|Drosophila melanogaster CG8063-PA...    28   8.8  

>AY113475-1|AAM29480.1|  168|Drosophila melanogaster RE43724p
           protein.
          Length = 168

 Score =  167 bits (405), Expect = 1e-41
 Identities = 77/90 (85%), Positives = 84/90 (93%)
 Frame = +2

Query: 2   ADEIEKILCKKFMRFMMMRAENFIVLRRKPVDGYHISFLITNFHTEQMYKHKLVDFVIYF 181
           ADEIE+ILC KF RFMM RAE+F++LRRKP++GY ISFLITNFHTEQMYKHKLVDFVI F
Sbjct: 79  ADEIERILCHKFTRFMMRRAESFVILRRKPIEGYDISFLITNFHTEQMYKHKLVDFVISF 138

Query: 182 MEEIDKEISEMKLAVNARARICSEEFLKRF 271
           MEEIDKEISEMKLAVNARAR C+EEFLKRF
Sbjct: 139 MEEIDKEISEMKLAVNARARTCAEEFLKRF 168


>AE014134-1056|AAF52346.1|  168|Drosophila melanogaster CG5972-PA
           protein.
          Length = 168

 Score =  167 bits (405), Expect = 1e-41
 Identities = 77/90 (85%), Positives = 84/90 (93%)
 Frame = +2

Query: 2   ADEIEKILCKKFMRFMMMRAENFIVLRRKPVDGYHISFLITNFHTEQMYKHKLVDFVIYF 181
           ADEIE+ILC KF RFMM RAE+F++LRRKP++GY ISFLITNFHTEQMYKHKLVDFVI F
Sbjct: 79  ADEIERILCHKFTRFMMRRAESFVILRRKPIEGYDISFLITNFHTEQMYKHKLVDFVISF 138

Query: 182 MEEIDKEISEMKLAVNARARICSEEFLKRF 271
           MEEIDKEISEMKLAVNARAR C+EEFLKRF
Sbjct: 139 MEEIDKEISEMKLAVNARARTCAEEFLKRF 168


>AF210453-1|AAF21041.1| 4559|Drosophila melanogaster dynein heavy
            chain protein.
          Length = 4559

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = +2

Query: 179  FMEEIDKEISEMKLAVNARARICSEEFLK 265
            F  + +K + +++  V A+A++C E+FLK
Sbjct: 3196 FASKEEKNVRQIEEDVTAKAKLCEEDFLK 3224


>AY060728-1|AAL28276.1|  452|Drosophila melanogaster GH17451p
           protein.
          Length = 452

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1

Query: 409 LYHYKNDI*IWNFRRNYFFF 468
           +YH +ND  IW+F  NYF F
Sbjct: 254 VYHLRNDR-IWSFEHNYFNF 272


>AE014297-1606|AAF54885.2|  452|Drosophila melanogaster CG8063-PA
           protein.
          Length = 452

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1

Query: 409 LYHYKNDI*IWNFRRNYFFF 468
           +YH +ND  IW+F  NYF F
Sbjct: 254 VYHLRNDR-IWSFEHNYFNF 272


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,219,565
Number of Sequences: 53049
Number of extensions: 367434
Number of successful extensions: 910
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)