Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS334A08f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0367 + 22399785-22399899,22400911-22401102,22401990-224021...    27   6.9  
02_02_0444 + 10340927-10341063,10341157-10341241,10341480-103415...    27   6.9  

>02_04_0367 +
           22399785-22399899,22400911-22401102,22401990-22402117,
           22402229-22402384,22402948-22403206,22403762-22403836,
           22404288-22404610,22405041-22405274,22405355-22405542,
           22405734-22405869,22405963-22406071,22406988-22407090,
           22407188-22407374,22407467-22407565,22407666-22407724,
           22408581-22408686,22408798-22408962
          Length = 877

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
 Frame = +1

Query: 22  RSYCFYYESILLKTLKYARN--LKIF*LQILC*KFPTLIA---E*RILS*THLKYILFKW 186
           +SY  +  ++  +T  YA+N  +K++ +      F ++I    +  +L   +L   +F W
Sbjct: 393 QSYTSFPANLQKRTQVYAKNTSVKVYIVGCFIMGFSSIILLLEKSPLLYHAYLFMTIFLW 452

Query: 187 ------FNFLWSVWNKW*SKKTKKDFNFITIGIL*LFHLTFVV 297
                 F F+ +VW +  +   K   N + I ++ LF L F+V
Sbjct: 453 TRIVQNFEFIKAVWRELSNMPFKYTMNLLNISVIALFILEFLV 495


>02_02_0444 +
           10340927-10341063,10341157-10341241,10341480-10341537,
           10343738-10345885,10345943-10346388
          Length = 957

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -1

Query: 275 NYNIPIVIKLKSFFVFLLYHLFHTDHKKLN 186
           NYN+P + KL + +VF+  H+  T+   +N
Sbjct: 23  NYNVPNIKKLFNTYVFMAKHIEETNMMFMN 52


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,504,865
Number of Sequences: 37544
Number of extensions: 141642
Number of successful extensions: 187
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)