Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS334A01f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 54 1e-08
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 42 2e-05
SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomy... 29 0.56
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 28 0.73
SPBC651.06 |mug166||sequence orphan|Schizosaccharomyces pombe|ch... 27 1.3
SPBC8D2.06 |||isoleucine-tRNA ligase |Schizosaccharomyces pombe|... 27 2.2
SPAC637.12c |mst1||histone acetyltransferase Mst1|Schizosaccharo... 26 3.0
SPAC1F5.09c |shk2|pak2|PAK-related kinase Shk2 |Schizosaccharomy... 25 5.2
SPBC21.05c |ral2||Ras guanyl-nucleotide exchange factor Ral2 |Sc... 25 5.2
SPAC24B11.14 ||SPAC806.10|sequence orphan|Schizosaccharomyces po... 25 6.8
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 54.4 bits (125), Expect = 1e-08
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 6/147 (4%)
Frame = +1
Query: 61 LKWQKVYNPTGPQPRPRHGHRAVAIKDLMIVFGGG------NEGIVHELHVFNTTTNQWF 222
L WQK N +G +P R+GH + + +FGG N+ + +L+ NT+ ++W
Sbjct: 173 LVWQKA-NASGARPSGRYGHTISCLGSKICLFGGRLLDYYFNDLVCFDLNNLNTSDSRWE 231
Query: 223 VPVTKGEVPPGCAAYGFVVDGTRLLVFGGMVEYGKYSNDLYELQASRWXWXXXXXXXXXX 402
+ + PP A + +L +FGG + + NDL+ + W
Sbjct: 232 LASVVNDPPPARAGHVAFTFSDKLYIFGG-TDGANFFNDLWCYHPKQSAW----SKVETF 286
Query: 403 XXXXXXXXGHSFTLLNGKVYLFGGLAN 483
GH+ +++ G +Y+FGG A+
Sbjct: 287 GVAPNPRAGHAASVVEGILYVFGGRAS 313
Score = 49.2 bits (112), Expect = 4e-07
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Frame = +1
Query: 67 WQKVYNPTGPQPRPRHGHRAVAIKDLMIVFGG-GNEG-IVHELHVFNTTTNQWFVPVTKG 240
W KV G P PR GH A ++ ++ VFGG ++G +++L+ F ++ W+
Sbjct: 280 WSKV-ETFGVAPNPRAGHAASVVEGILYVFGGRASDGTFLNDLYAFRLSSKHWYKLSDLP 338
Query: 241 EVPPGCAAYGFVVDGTRLLVFGGMVEYGKYSNDLYELQASRW 366
P +++ G L++ GG G +++Y L SR+
Sbjct: 339 FTPSPRSSHTLSCSGLTLVLIGGKQGKGASDSNVYMLDTSRF 380
Score = 47.2 bits (107), Expect = 1e-06
Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Frame = +1
Query: 64 KWQKVYNPTGPQPRPRHGHRAVAIKDLMIVFGGGN-EGIVHELHVFNTTTNQWFVPVTKG 240
+W+ P P R GH A D + +FGG + ++L ++ + W T G
Sbjct: 229 RWELASVVNDPPPA-RAGHVAFTFSDKLYIFGGTDGANFFNDLWCYHPKQSAWSKVETFG 287
Query: 241 EVP-PGCAAYGFVVDGTRLLVFGGMVEYGKYSNDLYELQASRWXW 372
P P VV+G L VFGG G + NDLY + S W
Sbjct: 288 VAPNPRAGHAASVVEGI-LYVFGGRASDGTFLNDLYAFRLSSKHW 331
Score = 44.8 bits (101), Expect = 8e-06
Identities = 39/139 (28%), Positives = 59/139 (42%), Gaps = 11/139 (7%)
Frame = +1
Query: 91 GPQPRPRHGHRAVAIKDLMIVFGG-GNEGIV----HELHVFNTTTNQWFVPVTKGEVPPG 255
G P PR GH ++ I + IVFGG N + + L++ NT++ W G P G
Sbjct: 128 GETPSPRLGHASILIGNAFIVFGGLTNHDVADRQDNSLYLLNTSSLVWQKANASGARPSG 187
Query: 256 CAAYGFVVDGTRLLVFGG-MVEYGKYSNDLY-----ELQASRWXWXXXXXXXXXXXXXXX 417
+ G+++ +FGG +++Y Y NDL L S W
Sbjct: 188 RYGHTISCLGSKICLFGGRLLDY--YFNDLVCFDLNNLNTSDSRW----ELASVVNDPPP 241
Query: 418 XXXGHSFTLLNGKVYLFGG 474
GH + K+Y+FGG
Sbjct: 242 ARAGHVAFTFSDKLYIFGG 260
Score = 42.3 bits (95), Expect = 4e-05
Identities = 35/144 (24%), Positives = 57/144 (39%), Gaps = 8/144 (5%)
Frame = +1
Query: 67 WQKVYNPTGPQPRPRHGHRAVAIKD---LMIVFGG--GNEGIVHELHVFNTTTNQWFVPV 231
W K+ PR+ H + + + +FGG + ++L V N T+Q+
Sbjct: 66 WSKLTVRGSSNVLPRYSHASHLYAEGGQEIYIFGGVASDSQPKNDLWVLNLATSQFTSLR 125
Query: 232 TKGEVPPGCAAYGFVVDGTRLLVFGGMVEY---GKYSNDLYELQASRWXWXXXXXXXXXX 402
+ GE P + ++ G +VFGG+ + + N LY L S W
Sbjct: 126 SLGETPSPRLGHASILIGNAFIVFGGLTNHDVADRQDNSLYLLNTSSLVW----QKANAS 181
Query: 403 XXXXXXXXGHSFTLLNGKVYLFGG 474
GH+ + L K+ LFGG
Sbjct: 182 GARPSGRYGHTISCLGSKICLFGG 205
Score = 26.2 bits (55), Expect = 3.0
Identities = 17/75 (22%), Positives = 30/75 (40%)
Frame = +1
Query: 259 AAYGFVVDGTRLLVFGGMVEYGKYSNDLYELQASRWXWXXXXXXXXXXXXXXXXXXGHSF 438
A++ + G + +FGG+ + NDL+ L + + GH+
Sbjct: 84 ASHLYAEGGQEIYIFGGVASDSQPKNDLWVLNLATSQFTSLRSLGETPSPRL----GHAS 139
Query: 439 TLLNGKVYLFGGLAN 483
L+ +FGGL N
Sbjct: 140 ILIGNAFIVFGGLTN 154
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 41.9 bits (94), Expect = 6e-05
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +1
Query: 61 LKWQKVYNPTGPQPRPRHGHRAVAIKDLMIVFGG-GNEG-IVHELHVFNTTTNQW 219
L W +V + G P PR GH+A I D + ++GG N+G I++EL FN + +W
Sbjct: 283 LSWTEVRS-IGRFPGPREGHQATTIDDTVYIYGGRDNKGLILNELWAFNYSQQRW 336
Score = 41.1 bits (92), Expect = 1e-04
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Frame = +1
Query: 109 RHGHRAVAIKDLMIVFGGGN-------EGIVHELHVFNTTTNQWFVPVTKGEVPPGCAAY 267
R GH V D + +FGG + E + L+ +N +NQW + T+ +P +
Sbjct: 113 RVGHSIVCSADTIYLFGGCDSETDSTFEVGDNSLYAYNFKSNQWNLVSTQSPLPSPRTGH 172
Query: 268 GFVVDGTRLLVFGGMVEYGKYSNDLY 345
++ ++L +FGG + GKY ND++
Sbjct: 173 SMLLVDSKLWIFGGECQ-GKYLNDIH 197
Score = 33.5 bits (73), Expect(2) = 2e-05
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 64 KWQKVYNPTGPQPRPRHGHRAVAIKDLMIVFGGGNEG-IVHELHVFNT 204
+W V + P P PR GH + + + +FGG +G ++++H+F+T
Sbjct: 155 QWNLV-STQSPLPSPRTGHSMLLVDSKLWIFGGECQGKYLNDIHLFDT 201
Score = 29.1 bits (62), Expect(2) = 2e-05
Identities = 22/97 (22%), Positives = 37/97 (38%), Gaps = 1/97 (1%)
Frame = +1
Query: 196 FNTTTNQWFVPVTKGEVPPGCAAYGFVVDGTRLLVFGGMVEYGKYSND-LYELQASRWXW 372
F+ T W P PP + + + ++ V GG + G S+ L++L+ W
Sbjct: 228 FDETDWSWETPFLHSSSPPPRSNHSVTLVQGKIFVHGGHNDTGPLSDLWLFDLETLSWT- 286
Query: 373 XXXXXXXXXXXXXXXXXXGHSFTLLNGKVYLFGGLAN 483
GH T ++ VY++GG N
Sbjct: 287 -----EVRSIGRFPGPREGHQATTIDDTVYIYGGRDN 318
Score = 24.6 bits (51), Expect = 9.0
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 427 GHSFTLLNGKVYLFGG 474
GHS L++ K+++FGG
Sbjct: 171 GHSMLLVDSKLWIFGG 186
>SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 28.7 bits (61), Expect = 0.56
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 359 EACNSYKSFEYLPYSTMPPKTNRRVPSTTKP 267
EA + SF P +PP+ + VP T+KP
Sbjct: 926 EALRAVSSFRRPPRQLIPPQQSTNVPGTSKP 956
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 28.3 bits (60), Expect = 0.73
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -1
Query: 317 STMPPKTNRRVPSTTKP*AAHPGGTSPFVTGTNH 216
+T+PP T+ +TT P H T+ V T H
Sbjct: 94 TTVPPTTSLNTTTTTAPPTTHVNSTTTVVPPTTH 127
>SPBC651.06 |mug166||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 234
Score = 27.5 bits (58), Expect = 1.3
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 338 SFEYLPYSTMPPKTNRRVPSTTKP*AAHPGGTSP 237
+F +PY + P +R PS+ A+ G TSP
Sbjct: 152 TFTAVPYDSCLPAPDRHTPSSASSRASETGTTSP 185
>SPBC8D2.06 |||isoleucine-tRNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1064
Score = 26.6 bits (56), Expect = 2.2
Identities = 20/77 (25%), Positives = 28/77 (36%), Gaps = 2/77 (2%)
Frame = +1
Query: 34 IVKMKENAVLKWQKVYNPTGPQPRPRHGHRAVAIKDLMIVFGGGNEGIVHELHVFNTTTN 213
I++ + L QK Y P P + G RA + V G GIVH+ F
Sbjct: 271 ILERFQGKALDGQK-YEPLFPYFKSTFGERAFKLYSADYVEEGSGTGIVHQAPAFGEADY 329
Query: 214 Q--WFVPVTKGEVPPGC 258
W + + P C
Sbjct: 330 DAAWAAGIIDADHQPPC 346
>SPAC637.12c |mst1||histone acetyltransferase
Mst1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 463
Score = 26.2 bits (55), Expect = 3.0
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -1
Query: 380 KRFHXHLEACNSYKSFEYLPYSTMPPKTNRRVPSTTKP*AAHPGGTS 240
K+ H ++ K+ + T P KT PST KP + P G S
Sbjct: 87 KKAHGKGKSSKRPKAVDRRRSITAPSKTEPSTPSTEKPEPSTPSGES 133
>SPAC1F5.09c |shk2|pak2|PAK-related kinase Shk2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 589
Score = 25.4 bits (53), Expect = 5.2
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 155 SAAETKESFTNCMSSIPPLISGSYQSQKEKSH 250
+ +ETK+SF+ C ++P + SY + H
Sbjct: 190 TTSETKDSFSFCKETLPRSSTTSYSIRDADKH 221
>SPBC21.05c |ral2||Ras guanyl-nucleotide exchange factor Ral2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 25.4 bits (53), Expect = 5.2
Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Frame = +1
Query: 67 WQKVYNPTGPQPRPRHGHRAVAIKDLMIVFG--GGNEG-----IVHELHVFNTTTNQW 219
W++V +P PR+ H + +I FG G N+ +++++ +++ T QW
Sbjct: 71 WKQVEYQGNQKPIPRYFHSGDLWNNKLIFFGGMGFNDDTKCLYVLNDIDIYDIETKQW 128
>SPAC24B11.14 ||SPAC806.10|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 166
Score = 25.0 bits (52), Expect = 6.8
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -1
Query: 389 SGFKRFHXHLEACNSYKSFEYLPYSTMPPKTNRRVPSTTKP 267
+GF+R+ ++E N F Y Y ++ T+ +VP P
Sbjct: 70 AGFQRYIVNVEFSNVQSYFRYYNYISLYFVTHSKVPLNRLP 110
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,128,283
Number of Sequences: 5004
Number of extensions: 41451
Number of successful extensions: 138
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 131
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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