Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS333H11f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC006405-1|AAH06405.1|  123|Homo sapiens thioredoxin-like 5 prot...    96   8e-20
AJ344101-1|CAC51435.1|  123|Homo sapiens putative 42-9-9 protein...    96   8e-20
X77584-1|CAA54687.1|  105|Homo sapiens ATL-derived factor/thiore...    29   7.5  
X54539-1|CAA38410.1|  105|Homo sapiens thioredoxin protein.            29   7.5  
CR407665-1|CAG28593.1|  105|Homo sapiens TXN protein.                  29   7.5  
BC054866-1|AAH54866.1|  105|Homo sapiens thioredoxin protein.          29   7.5  
BC003377-1|AAH03377.1|  105|Homo sapiens thioredoxin protein.          29   7.5  
AY004872-1|AAF87085.1|  105|Homo sapiens thioredoxin protein.          29   7.5  
AL158158-1|CAI14066.1|  105|Homo sapiens thioredoxin protein.          29   7.5  
AF548001-1|AAN33187.1|  105|Homo sapiens thioredoxin protein.          29   7.5  
AF313911-1|AAG34699.1|  105|Homo sapiens thioredoxin protein.          29   7.5  
J04026-1|AAA74596.1|  105|Homo sapiens thioredoxin protein.            29   9.9  
AF276919-1|AAF86466.1|  105|Homo sapiens thioredoxin 1 protein.        29   9.9  

>BC006405-1|AAH06405.1|  123|Homo sapiens thioredoxin-like 5
           protein.
          Length = 123

 Score = 95.9 bits (228), Expect = 8e-20
 Identities = 45/98 (45%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
 Frame = +1

Query: 223 VDLKGFEEFSKYTRAIDSR-GPPVFFYFSGSKLPDGNSWCPDCVEAEPVVRHYLSELDKS 399
           V + GFEEF    RA++   G  +F YF+GSK   G SWCPDCV+AEPVVR  L  + + 
Sbjct: 7   VSVSGFEEFH---RAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEG 63

Query: 400 IIFVYVDVGDREYWKDKECPFRTDSRSKLMVIPTLIKW 513
            +F+Y  VG++ YWKD    FR     K+  +PTL+K+
Sbjct: 64  CVFIYCQVGEKPYWKDPNNDFR--KNLKVTAVPTLLKY 99


>AJ344101-1|CAC51435.1|  123|Homo sapiens putative 42-9-9 protein
           protein.
          Length = 123

 Score = 95.9 bits (228), Expect = 8e-20
 Identities = 45/98 (45%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
 Frame = +1

Query: 223 VDLKGFEEFSKYTRAIDSR-GPPVFFYFSGSKLPDGNSWCPDCVEAEPVVRHYLSELDKS 399
           V + GFEEF    RA++   G  +F YF+GSK   G SWCPDCV+AEPVVR  L  + + 
Sbjct: 7   VSVSGFEEFH---RAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEG 63

Query: 400 IIFVYVDVGDREYWKDKECPFRTDSRSKLMVIPTLIKW 513
            +F+Y  VG++ YWKD    FR     K+  +PTL+K+
Sbjct: 64  CVFIYCQVGEKPYWKDPNNDFR--KNLKVTAVPTLLKY 99


>X77584-1|CAA54687.1|  105|Homo sapiens ATL-derived
           factor/thioredoxin protein.
          Length = 105

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 331 SWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGD 429
           +WC  C   +P   H LSE   ++IF+ VDV D
Sbjct: 30  TWCGPCKMIKPFF-HSLSEKYSNVIFLEVDVDD 61


>X54539-1|CAA38410.1|  105|Homo sapiens thioredoxin protein.
          Length = 105

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 331 SWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGD 429
           +WC  C   +P   H LSE   ++IF+ VDV D
Sbjct: 30  TWCGPCKMIKPFF-HSLSEKYSNVIFLEVDVDD 61


>CR407665-1|CAG28593.1|  105|Homo sapiens TXN protein.
          Length = 105

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 331 SWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGD 429
           +WC  C   +P   H LSE   ++IF+ VDV D
Sbjct: 30  TWCGPCKMIKPFF-HSLSEKYSNVIFLEVDVDD 61


>BC054866-1|AAH54866.1|  105|Homo sapiens thioredoxin protein.
          Length = 105

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 331 SWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGD 429
           +WC  C   +P   H LSE   ++IF+ VDV D
Sbjct: 30  TWCGPCKMIKPFF-HSLSEKYSNVIFLEVDVDD 61


>BC003377-1|AAH03377.1|  105|Homo sapiens thioredoxin protein.
          Length = 105

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 331 SWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGD 429
           +WC  C   +P   H LSE   ++IF+ VDV D
Sbjct: 30  TWCGPCKMIKPFF-HSLSEKYSNVIFLEVDVDD 61


>AY004872-1|AAF87085.1|  105|Homo sapiens thioredoxin protein.
          Length = 105

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 331 SWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGD 429
           +WC  C   +P   H LSE   ++IF+ VDV D
Sbjct: 30  TWCGPCKMIKPFF-HSLSEKYSNVIFLEVDVDD 61


>AL158158-1|CAI14066.1|  105|Homo sapiens thioredoxin protein.
          Length = 105

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 331 SWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGD 429
           +WC  C   +P   H LSE   ++IF+ VDV D
Sbjct: 30  TWCGPCKMIKPFF-HSLSEKYSNVIFLEVDVDD 61


>AF548001-1|AAN33187.1|  105|Homo sapiens thioredoxin protein.
          Length = 105

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 331 SWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGD 429
           +WC  C   +P   H LSE   ++IF+ VDV D
Sbjct: 30  TWCGPCKMIKPFF-HSLSEKYSNVIFLEVDVDD 61


>AF313911-1|AAG34699.1|  105|Homo sapiens thioredoxin protein.
          Length = 105

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 331 SWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGD 429
           +WC  C   +P   H LSE   ++IF+ VDV D
Sbjct: 30  TWCGPCKMIKPFF-HSLSEKYSNVIFLEVDVDD 61


>J04026-1|AAA74596.1|  105|Homo sapiens thioredoxin protein.
          Length = 105

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 331 SWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGD 429
           +WC  C    P   H LSE   ++IF+ VDV D
Sbjct: 30  TWCGPCKMINPFF-HSLSEKYSNVIFLEVDVDD 61


>AF276919-1|AAF86466.1|  105|Homo sapiens thioredoxin 1 protein.
          Length = 105

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 331 SWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGD 429
           +WC  C    P   H LSE   ++IF+ VDV D
Sbjct: 30  TWCGPCKMINPFF-HSLSEKYSNVIFLEVDVDD 61


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,239,899
Number of Sequences: 237096
Number of extensions: 1433343
Number of successful extensions: 2325
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2325
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)