Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS333H07f
(452 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0584 - 4178391-4178732,4178854-4178915,4180361-4180481,418... 39 0.002
01_06_1556 - 38222071-38222708,38222795-38222822,38222950-382230... 37 0.009
01_01_0020 + 147147-147313,148450-148548,148634-148742,148856-14... 36 0.015
09_04_0287 - 16407324-16407551,16407647-16407748,16407824-164079... 35 0.027
03_05_0952 + 29103879-29103983,29104103-29104600,29104693-291047... 35 0.027
03_02_1012 + 13207907-13207990,13209196-13209280,13209402-132101... 35 0.027
02_05_0366 - 28313190-28313601,28313759-28314225,28315044-283157... 35 0.027
08_01_0540 + 4691929-4692014,4692915-4693125,4693756-4693885,469... 34 0.047
04_04_1247 - 32043776-32043880,32044296-32044505,32044595-320451... 33 0.081
04_04_1704 - 35481041-35481461,35481682-35481810,35482291-354823... 33 0.11
01_06_0919 - 32993752-32993856,32994383-32994592,32994666-329952... 33 0.11
07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753... 31 0.33
01_06_0006 - 25517892-25517935,25518156-25518276,25518598-255187... 31 0.43
10_08_0259 + 16274430-16274747,16275180-16275242,16275329-162754... 31 0.57
05_03_0142 - 8866316-8866608,8867652-8867886,8868801-8869076,886... 30 0.76
02_01_0459 + 3298780-3298788,3298900-3299037,3299174-3299207,329... 28 3.1
11_01_0432 + 3313060-3313107,3313610-3313753,3314510-3314662,331... 27 7.1
06_01_0349 + 2529279-2530446,2532232-2533036,2533066-2533106,253... 27 7.1
01_01_0098 + 744582-745380,746107-746130,746500-747569 27 7.1
>06_01_0584 -
4178391-4178732,4178854-4178915,4180361-4180481,
4180592-4180732,4180830-4180959,4182306-4182436,
4182528-4182601,4182680-4182741,4183135-4183209,
4184658-4184760,4184835-4184991,4185549-4185743,
4186204-4186282,4186697-4186806,4187249-4187374,
4187475-4187541,4187622-4187791,4187880-4188018,
4188361-4188522,4188672-4188772,4188852-4188994,
4189438-4189537,4190364-4190414,4191062-4191169,
4191279-4191494,4191585-4191721,4191820-4191915,
4192017-4192234,4192764-4192925,4193006-4193163,
4194221-4194379
Length = 1364
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIYQVAQEKLNLEKHVTG 108
QT V IYRL+S GTIEE + Q+ ++K+ LE V G
Sbjct: 726 QTSKVMIYRLVSRGTIEERMMQLTKKKMVLEHLVVG 761
>01_06_1556 - 38222071-38222708,38222795-38222822,38222950-38223070,
38223206-38223318,38223424-38223506,38223868-38223930,
38224100-38224254,38224411-38224580,38225101-38225189,
38225304-38225496,38225655-38225779,38226069-38226475,
38226855-38226919,38227414-38227692,38227772-38227845,
38228241-38228292,38228366-38228473,38228871-38228972,
38229100-38229173,38229262-38229435,38229667-38229771,
38229867-38229977,38230364-38230487
Length = 1150
Score = 36.7 bits (81), Expect = 0.009
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIYQVAQEKLNLEKHVTGEDENEPTEQKNVVRLLSA 162
QTRPV +Y+LI+ ++EE I Q +++KL +E + + ++ + L A
Sbjct: 959 QTRPVVVYQLITKCSVEEKILQKSKQKLAIENMLMNSSKKPSADELQSILLHGA 1012
>01_01_0020 + 147147-147313,148450-148548,148634-148742,148856-148927,
149056-149061,150811-150915,151048-151539,151629-152025,
152178-153646,154010-154450,154543-155214
Length = 1342
Score = 35.9 bits (79), Expect = 0.015
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIY 63
QTR VT+YRLI+ GTIEE +Y
Sbjct: 982 QTRDVTVYRLITRGTIEEKVY 1002
>09_04_0287 -
16407324-16407551,16407647-16407748,16407824-16407922,
16408213-16408332,16408513-16408632,16408740-16408834,
16409109-16409365,16410134-16410309,16410401-16410587,
16410656-16411002,16411722-16411823,16411917-16412414,
16412520-16412624
Length = 811
Score = 35.1 bits (77), Expect = 0.027
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIYQVAQEKLNLEKHVTGEDENEPTEQK 138
QTRPV +YRL ++ ++E I + A KL LE V G+ + E K
Sbjct: 686 QTRPVHVYRLATSHSVEGRIIKKAFGKLRLEHVVIGKGQFEQDRAK 731
>03_05_0952 +
29103879-29103983,29104103-29104600,29104693-29104794,
29105552-29105898,29105967-29106153,29106242-29106417,
29106976-29107065,29107066-29107322,29107593-29107687,
29107801-29107920,29108111-29108230,29108410-29108508,
29108588-29108689,29108884-29109111
Length = 841
Score = 35.1 bits (77), Expect = 0.027
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIYQVAQEKLNLEKHVTGEDENEPTEQK 138
QTRPV +YRL ++ ++E I + A KL LE V G+ + E K
Sbjct: 716 QTRPVHVYRLATSHSVEGRIIKKAFGKLRLEHVVIGKGQFEQDRAK 761
>03_02_1012 + 13207907-13207990,13209196-13209280,13209402-13210186,
13210262-13210462,13210580-13210690,13211105-13211487,
13211594-13211702,13211786-13211866,13212088-13212156,
13212379-13212467,13212619-13212780,13212859-13212916,
13213143-13213373,13213516-13213662,13213779-13214333,
13214562-13214819,13215096-13215203,13215760-13215854,
13215946-13216102,13216466-13216666,13217542-13217670,
13218292-13218567
Length = 1457
Score = 35.1 bits (77), Expect = 0.027
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIYQVAQEKLNLEKHV-TGE--DENEPTEQKNVVRLL 156
QT+ VT+YRLI TIEE I Q A++K +++ V G+ ++ Q++VV LL
Sbjct: 1253 QTKEVTVYRLICKDTIEEKILQRAKQKNAVQELVMKGKHVQDDHLMRQEDVVSLL 1307
>02_05_0366 - 28313190-28313601,28313759-28314225,28315044-28315782,
28316548-28316615,28316693-28316757,28316922-28320162,
28320239-28320301,28320756-28320824,28321020-28321055,
28322035-28322280,28322531-28322569,28322695-28322816,
28322921-28323004,28323100-28323235,28323486-28323535,
28323620-28323756,28323863-28323951,28324847-28324954,
28325080-28325163,28325841-28325888,28326036-28326153,
28328262-28328347
Length = 2168
Score = 35.1 bits (77), Expect = 0.027
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIYQVAQEKLNLE 93
QTR V IYRLIS TIEE I + A +K L+
Sbjct: 1317 QTREVHIYRLISESTIEENILKKANQKRALD 1347
>08_01_0540 + 4691929-4692014,4692915-4693125,4693756-4693885,
4695422-4696072,4696179-4696395,4697040-4697111,
4697167-4697257,4697367-4698363,4698914-4699044,
4699584-4699802,4700110-4700805,4700912-4701121,
4701606-4701710
Length = 1271
Score = 34.3 bits (75), Expect = 0.047
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIYQVAQEKLNLEKHVTGEDEN 120
QTRPVT+ RL T+E+ I + +EK + GED++
Sbjct: 1214 QTRPVTVSRLTIKDTVEDRILALQEEKRAMVSSAFGEDKS 1253
>04_04_1247 - 32043776-32043880,32044296-32044505,32044595-32045101,
32045362-32045583,32046054-32046184,32046737-32047745,
32047830-32047904,32047995-32048066,32048153-32048328,
32048494-32048646,32048739-32049234
Length = 1051
Score = 33.5 bits (73), Expect = 0.081
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIYQVAQEKLNLEKHVTGEDE 117
QTRPVT+ RL T+E+ I + ++K + + GED+
Sbjct: 994 QTRPVTVSRLTIKDTVEDRILALQEKKRKMVQSAFGEDK 1032
>04_04_1704 - 35481041-35481461,35481682-35481810,35482291-35482397,
35482515-35482583,35482825-35482936,35483013-35483131,
35483211-35483291,35483629-35483700,35484039-35484239,
35484442-35484528,35485284-35485523,35485991-35486455,
35487434-35487556,35487643-35487769,35487851-35487919,
35488061-35488189,35488628-35488722,35488808-35488876,
35489332-35489443,35489545-35489663,35489753-35489833,
35490898-35490969,35491052-35491267,35491524-35491601,
35491694-35491831,35492403-35492414,35492639-35492872,
35493076-35493130,35493222-35493352,35493813-35494546,
35494613-35494820
Length = 1634
Score = 33.1 bits (72), Expect = 0.11
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIYQ 66
QT+ V +YRL++ GTIEE IY+
Sbjct: 1370 QTKDVIVYRLVTCGTIEEKIYK 1391
Score = 31.1 bits (67), Expect = 0.43
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIYQVAQEKLNLEKHVTGEDE 117
Q + V +YRL+++GTIEE IY++ K L + T E
Sbjct: 707 QMKDVIVYRLMTSGTIEEKIYKLQVFKGALFRTATEHKE 745
>01_06_0919 - 32993752-32993856,32994383-32994592,32994666-32995220,
32995705-32995926,32996381-32996511,32997456-32998353,
32998453-32998530,32998612-32998683,32998728-32998763,
32999413-33000353,33000531-33000659,33000751-33000894,
33000994-33001060,33002434-33002502,33003144-33003278
Length = 1263
Score = 33.1 bits (72), Expect = 0.11
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIYQVAQEKLNLEKHVTGEDEN 120
QTRPVT+ RL T+E+ I + ++K + GED++
Sbjct: 1206 QTRPVTVSRLTIKDTVEDRILALQEKKREMVASAFGEDKS 1245
>07_03_0481 - 18572206-18574314,18574591-18575185,18575304-18575371,
18577344-18577458,18578179-18578333,18578673-18580621,
18580691-18581372,18581550-18581621,18582558-18583199,
18583301-18583402,18585011-18585100
Length = 2192
Score = 31.5 bits (68), Expect = 0.33
Identities = 14/50 (28%), Positives = 32/50 (64%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIYQVAQEKLNLEKHVTGEDENEPTEQKNVVR 150
Q+ + +YRL+ ++EE I +A++KL L++ + E++ E ++++R
Sbjct: 1038 QSNRLLVYRLVVRASVEERILHLAKKKLMLDQLFVNKSESQ-KEVEDIIR 1086
>01_06_0006 -
25517892-25517935,25518156-25518276,25518598-25518733,
25519189-25519280,25519358-25519426,25519710-25519821,
25519897-25520015,25520302-25520355,25520811-25520891,
25520968-25521051,25521124-25521315,25521633-25521746,
25521832-25521978,25522066-25522302,25522762-25522810,
25522894-25523027,25523124-25523324,25523532-25523701,
25523773-25523875,25524198-25524361,25525015-25525055,
25525144-25525187
Length = 835
Score = 31.1 bits (67), Expect = 0.43
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIYQVAQEKLNLEKHVTGE 111
Q + V IYRLI++ TIEE IY+ K + K T E
Sbjct: 659 QEKNVIIYRLITSCTIEERIYEKQVSKEGIFKAATEE 695
>10_08_0259 + 16274430-16274747,16275180-16275242,16275329-16275424,
16275526-16275618,16276415-16276605,16276684-16276921,
16277805-16277900,16278324-16278404,16278532-16278939,
16279048-16279331,16279460-16279547,16279630-16279830,
16280032-16280118,16280119-16280238,16280536-16280708,
16281914-16282055,16282292-16282414,16282601-16282656,
16282735-16283038,16283154-16283283,16283491-16283549,
16283829-16284061,16285480-16285527,16285765-16285843,
16285925-16286169,16286338-16286722
Length = 1446
Score = 30.7 bits (66), Expect = 0.57
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIYQVAQEKLNLEKHVTGEDENEPTEQK 138
QT+PV YRL++ T+EE IY+ K L V + T K
Sbjct: 1214 QTKPVYAYRLMAHATMEEKIYKRQVTKEGLAARVVDRQQVSRTISK 1259
>05_03_0142 -
8866316-8866608,8867652-8867886,8868801-8869076,
8869166-8869292,8869869-8870116,8870189-8871104,
8871980-8872086,8872562-8872930
Length = 856
Score = 30.3 bits (65), Expect = 0.76
Identities = 14/31 (45%), Positives = 24/31 (77%), Gaps = 2/31 (6%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIY--QVAQEKLN 87
Q R VT++RL+ AG++EE IY Q+ +++L+
Sbjct: 634 QRRHVTVFRLLGAGSLEELIYSRQIYKQQLS 664
>02_01_0459 + 3298780-3298788,3298900-3299037,3299174-3299207,
3299528-3299531,3299814-3299949,3300034-3300090,
3301689-3301786,3301876-3301947,3302056-3302228,
3302552-3302698,3303113-3303336,3305300-3305306,
3305634-3305800,3306033-3306068,3306787-3307004,
3307115-3307172,3307761-3307842,3308045-3308207,
3308594-3308598,3308700-3308885,3308969-3309548,
3309642-3309774,3309880-3309948,3310184-3310395,
3310654-3310891,3311228-3311386,3311501-3311926,
3312010-3312447,3312593-3312712,3312784-3313266,
3313471-3314009,3314178-3314667,3314836-3314904,
3315735-3315839,3315940-3316158,3316254-3316508,
3316602-3316651,3317175-3317284,3317372-3317454,
3317560-3317772,3317870-3318040
Length = 2391
Score = 28.3 bits (60), Expect = 3.1
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIYQVAQEKLNLEKHVTGEDENEPTEQKNVVRLL 156
Q + V ++RLI GT+EE + + + K+++ V EN + N +LL
Sbjct: 2274 QRKVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINA-ENASLKTMNTDQLL 2324
>11_01_0432 + 3313060-3313107,3313610-3313753,3314510-3314662,
3315283-3315792,3315888-3317423,3317505-3317573,
3317742-3317807,3318517-3318640,3319464-3319690
Length = 958
Score = 27.1 bits (57), Expect = 7.1
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 183 GRGEAQRGGQQPDDVLLLRRFVLIFSGDVFL*IKFL 76
G GE Q + LRRFV+ FS D+ + +KF+
Sbjct: 913 GHGEVQLFSGIIGEPCSLRRFVMAFSLDIVMHLKFI 948
>06_01_0349 +
2529279-2530446,2532232-2533036,2533066-2533106,
2533219-2533424
Length = 739
Score = 27.1 bits (57), Expect = 7.1
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -3
Query: 150 PDDVLLLRRFVLIFSGDVFL*I--KFLLRDLIYSLLDGSGADQ 28
P+D L++RR+ L+ SG L + LL+ YS + G Q
Sbjct: 635 PEDYLIMRRYYLVESGGGLLMVTRAQLLQTFAYSFIQECGVPQ 677
>01_01_0098 + 744582-745380,746107-746130,746500-747569
Length = 630
Score = 27.1 bits (57), Expect = 7.1
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 34 SAGTIEEGIYQVAQEKLNLEKHVTGEDENEPTEQKNVVRLLSAALGL 174
S GT IY+ + +LEK++ D N P E + ++L ALG+
Sbjct: 396 SEGTRRALIYEFMPNE-SLEKYIFLHDHNTPQELLSPNKMLDIALGI 441
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,412,683
Number of Sequences: 37544
Number of extensions: 153530
Number of successful extensions: 362
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 362
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 883560296
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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