Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS333H07f
(452 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical pr... 41 4e-04
AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical ... 41 4e-04
Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical pr... 40 6e-04
Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical pr... 40 6e-04
U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical p... 35 0.024
AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf famil... 35 0.032
AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical... 35 0.032
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 35 0.032
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 35 0.032
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 34 0.042
AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical ... 32 0.22
Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical pr... 31 0.39
Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical pr... 31 0.39
AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-lik... 31 0.39
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 29 1.2
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 29 1.2
Z81089-1|CAB03135.2| 957|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z68161-9|CAA92298.2| 688|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical pr... 28 2.8
Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical p... 28 2.8
AL110471-3|CAB63308.1| 818|Caenorhabditis elegans Hypothetical ... 28 3.7
AL034364-6|CAA22254.2| 818|Caenorhabditis elegans Hypothetical ... 28 3.7
U28732-1|AAB04901.2| 540|Caenorhabditis elegans Hypothetical pr... 27 8.4
AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical ... 27 8.4
>Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical
protein M03C11.8 protein.
Length = 989
Score = 41.1 bits (92), Expect = 4e-04
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIYQVAQEKLNLEKHVT 105
Q +PV + RL+S GT+E G+ +A++KL LEK VT
Sbjct: 867 QEKPVHVTRLVSKGTVEVGMLALAKKKLQLEKQVT 901
>AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical
protein M03C11.8 protein.
Length = 989
Score = 41.1 bits (92), Expect = 4e-04
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIYQVAQEKLNLEKHVT 105
Q +PV + RL+S GT+E G+ +A++KL LEK VT
Sbjct: 867 QEKPVHVTRLVSKGTVEVGMLALAKKKLQLEKQVT 901
>Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical protein
F15D4.1 protein.
Length = 1529
Score = 40.3 bits (90), Expect = 6e-04
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIYQVAQEKLNLEKHVTGED 114
QTR V +YRLI+ GT+EE + +A+ KLN + + G D
Sbjct: 1422 QTRNVNVYRLITQGTVEEKVMSLAKFKLNTAQALIGAD 1459
>Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical protein
F15D4.1 protein.
Length = 1529
Score = 40.3 bits (90), Expect = 6e-04
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIYQVAQEKLNLEKHVTGED 114
QTR V +YRLI+ GT+EE + +A+ KLN + + G D
Sbjct: 1422 QTRNVNVYRLITQGTVEEKVMSLAKFKLNTAQALIGAD 1459
>U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical
protein C52B9.8 protein.
Length = 1336
Score = 35.1 bits (77), Expect = 0.024
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIYQVAQEKLNLEKHV--TGEDENEPTEQKNVVRLLSAALGL 174
Q V ++RLI+A ++EE I A+ KLN+++ V G+ +N T + R + +
Sbjct: 798 QKAEVRVFRLITANSVEEKILAAARYKLNVDEKVIQAGKFDNRSTGAER--REILENIIK 855
Query: 175 TSPNK*TDRHSPNKCDRTDVVTNVTRE 255
T D PN D D+++ E
Sbjct: 856 TENESEEDEEVPNDEDINDILSRSEEE 882
>AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf family
ATPase protein.
Length = 2395
Score = 34.7 bits (76), Expect = 0.032
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIYQVAQEKLNL 90
QTR V+IYRLIS TIEE I + A +K L
Sbjct: 1302 QTRNVSIYRLISERTIEENILRKATQKRRL 1331
>AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical
protein Y111B2A.22 protein.
Length = 2395
Score = 34.7 bits (76), Expect = 0.032
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIYQVAQEKLNL 90
QTR V+IYRLIS TIEE I + A +K L
Sbjct: 1302 QTRNVSIYRLISERTIEENILRKATQKRRL 1331
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 34.7 bits (76), Expect = 0.032
Identities = 17/32 (53%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIY--QVAQEKLNL 90
QT+PV IYR I+ GT+EE IY QV +E ++
Sbjct: 1089 QTKPVYIYRFIAQGTMEERIYKRQVTKESTSM 1120
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 34.7 bits (76), Expect = 0.032
Identities = 17/32 (53%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIY--QVAQEKLNL 90
QT+PV IYR I+ GT+EE IY QV +E ++
Sbjct: 1089 QTKPVYIYRFIAQGTMEERIYKRQVTKESTSM 1120
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical
protein H06O01.2 protein.
Length = 1461
Score = 34.3 bits (75), Expect = 0.042
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIYQVAQEKLNLE 93
QT+ V IYRL++ G++EE I + A+ KL L+
Sbjct: 826 QTKTVNIYRLVTKGSVEEEIVERAKRKLVLD 856
>AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical
protein Y116A8C.13 protein.
Length = 833
Score = 31.9 bits (69), Expect = 0.22
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIYQVAQEKLNL 90
Q RP IYRLI+ GTIEE + Q +K L
Sbjct: 632 QVRPCHIYRLITTGTIEEKMLQRQIKKTGL 661
>Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical protein
F01G4.1 protein.
Length = 1474
Score = 31.1 bits (67), Expect = 0.39
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIYQVAQEKLNLEKHV 102
Q + V + RLI+A ++EE I A+ KLN+++ V
Sbjct: 965 QKKEVRVLRLITANSVEEKILAAARYKLNVDEKV 998
>Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical protein
F01G4.1 protein.
Length = 1474
Score = 31.1 bits (67), Expect = 0.39
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIYQVAQEKLNLEKHV 102
Q + V + RLI+A ++EE I A+ KLN+++ V
Sbjct: 965 QKKEVRVLRLITANSVEEKILAAARYKLNVDEKV 998
>AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-like
protein protein.
Length = 1474
Score = 31.1 bits (67), Expect = 0.39
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIYQVAQEKLNLEKHV 102
Q + V + RLI+A ++EE I A+ KLN+++ V
Sbjct: 965 QKKEVRVLRLITANSVEEKILAAARYKLNVDEKV 998
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical protein
T14G8.1 protein.
Length = 1787
Score = 29.5 bits (63), Expect = 1.2
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIYQVAQEKLNL 90
Q V IYR ++ G++EE I VA++K+ L
Sbjct: 1055 QKHKVMIYRFVTKGSVEERITSVAKKKMLL 1084
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical protein
T14G8.1 protein.
Length = 1787
Score = 29.5 bits (63), Expect = 1.2
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIYQVAQEKLNL 90
Q V IYR ++ G++EE I VA++K+ L
Sbjct: 1055 QKHKVMIYRFVTKGSVEERITSVAKKKMLL 1084
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 29.5 bits (63), Expect = 1.2
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIYQVAQEKLNL 90
Q V IYR ++ G++EE I VA++K+ L
Sbjct: 1055 QKHKVMIYRFVTKGSVEERITSVAKKKMLL 1084
>Z81089-1|CAB03135.2| 957|Caenorhabditis elegans Hypothetical
protein F53H4.1 protein.
Length = 957
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIYQVAQEKLNL 90
QT V IYRL+S GTIE+ + +K NL
Sbjct: 636 QTNDVAIYRLVSNGTIEDLKFFKQVQKENL 665
>Z68161-9|CAA92298.2| 688|Caenorhabditis elegans Hypothetical
protein F20C5.5 protein.
Length = 688
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +1
Query: 31 ISAGTIEEGIYQVAQEKLNLEKHVTGEDENEPTEQKNVVRLLSAALGLTSPNK*TDRHSP 210
+ +E I+ E + L+ HV+ E N P ++N VR L+ + + ++ T R P
Sbjct: 440 VKVSALENQIFDKNDEIVKLKSHVSTESGNSPKLERN-VRELTLKISSETSSQGTSRTYP 498
Query: 211 N 213
+
Sbjct: 499 H 499
>Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical protein
F54E12.2 protein.
Length = 1091
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIYQVAQEKLNLEKHV 102
Q + V I+RL++ GTIE+ + + ++K+ L V
Sbjct: 1032 QKKDVFIHRLVTKGTIEQRVVMLQKDKVALASSV 1065
>Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical
protein F54E12.2 protein.
Length = 1091
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIYQVAQEKLNLEKHV 102
Q + V I+RL++ GTIE+ + + ++K+ L V
Sbjct: 1032 QKKDVFIHRLVTKGTIEQRVVMLQKDKVALASSV 1065
>AL110471-3|CAB63308.1| 818|Caenorhabditis elegans Hypothetical
protein W06D4.6 protein.
Length = 818
Score = 27.9 bits (59), Expect = 3.7
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIYQVAQEKLNLEKHV--TGEDENEPTEQKNVVRLLSAALGL 174
Q + IYRL++ G+IEE ++Q K L V GED + + L +
Sbjct: 663 QKKMCFIYRLLATGSIEEKMFQRQTHKKALSSCVVDAGEDVARHFSSEQLRELFKLESTV 722
Query: 175 TSPNK*TDRHSPNKCDR 225
S D H KC R
Sbjct: 723 AS-----DTHEKLKCKR 734
>AL034364-6|CAA22254.2| 818|Caenorhabditis elegans Hypothetical
protein W06D4.6 protein.
Length = 818
Score = 27.9 bits (59), Expect = 3.7
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Frame = +1
Query: 1 QTRPVTIYRLISAGTIEEGIYQVAQEKLNLEKHV--TGEDENEPTEQKNVVRLLSAALGL 174
Q + IYRL++ G+IEE ++Q K L V GED + + L +
Sbjct: 663 QKKMCFIYRLLATGSIEEKMFQRQTHKKALSSCVVDAGEDVARHFSSEQLRELFKLESTV 722
Query: 175 TSPNK*TDRHSPNKCDR 225
S D H KC R
Sbjct: 723 AS-----DTHEKLKCKR 734
>U28732-1|AAB04901.2| 540|Caenorhabditis elegans Hypothetical
protein F45E1.5 protein.
Length = 540
Score = 26.6 bits (56), Expect = 8.4
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 46 IEEGIYQVAQEKLNLEKHVTGEDENEPTEQKNVVR 150
I E Y+VA EK EK + + E EQK + R
Sbjct: 472 IREYRYKVAAEKSKYEKELKQKQREEQKEQKELKR 506
>AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical
protein M70.1 protein.
Length = 931
Score = 26.6 bits (56), Expect = 8.4
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 7 RPVTIYRLISAG-TIEEGIYQVAQEKLNL 90
+ +Y +I G T+EEG+ V+ E LNL
Sbjct: 610 KKAALYSIIEDGDTVEEGLISVSSEALNL 638
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,831,784
Number of Sequences: 27780
Number of extensions: 125348
Number of successful extensions: 396
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 396
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 799252350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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