Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS333H05f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF495723-1|AAQ06677.1|  143|Homo sapiens unknown protein.              31   2.4  
U97144-1|AAC51646.1|  460|Homo sapiens RET ligand 1 protein.           31   3.2  
U95847-1|AAB71811.1|  460|Homo sapiens GDNF receptor alpha protein.    31   3.2  
BC014962-1|AAH14962.1|  460|Homo sapiens GDNF family receptor al...    31   3.2  
AF058999-1|AAC14431.1|  465|Homo sapiens glial cell line-derived...    31   3.2  
AF042080-1|AAB97371.1|  465|Homo sapiens glial cell line-derived...    31   3.2  
AF038421-1|AAC39692.1|  465|Homo sapiens GPI-linked anchor prote...    31   3.2  
AF038420-1|AAC39693.1|  465|Homo sapiens GPI-linked anchor prote...    31   3.2  
AF332239-1|AAK13489.1|   68|Homo sapiens transcript Y 10 protein.      29   7.5  

>AF495723-1|AAQ06677.1|  143|Homo sapiens unknown protein.
          Length = 143

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 9/18 (50%), Positives = 16/18 (88%)
 Frame = -2

Query: 331 FSLHHPPWSVAIPSL*YP 278
           F+ HHPPWS+++P++ +P
Sbjct: 68  FAPHHPPWSLSLPTVPHP 85


>U97144-1|AAC51646.1|  460|Homo sapiens RET ligand 1 protein.
          Length = 460

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 18/47 (38%), Positives = 22/47 (46%)
 Frame = +2

Query: 380 FPKATTSTTKTGRLRKRSHSLRPSHFSEPCPRHSLRPPTKRLSYQPL 520
           FP  TT+ T T  LR ++  L P+      P H L PP   L  Q L
Sbjct: 353 FPVQTTTATTTTALRVKNKPLGPAGSENEIPTHVL-PPCANLQAQKL 398


>U95847-1|AAB71811.1|  460|Homo sapiens GDNF receptor alpha protein.
          Length = 460

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 18/47 (38%), Positives = 22/47 (46%)
 Frame = +2

Query: 380 FPKATTSTTKTGRLRKRSHSLRPSHFSEPCPRHSLRPPTKRLSYQPL 520
           FP  TT+ T T  LR ++  L P+      P H L PP   L  Q L
Sbjct: 353 FPVQTTTATTTTALRVKNKPLGPAGSENEIPTHVL-PPCANLQAQKL 398


>BC014962-1|AAH14962.1|  460|Homo sapiens GDNF family receptor alpha
           1 protein.
          Length = 460

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 18/47 (38%), Positives = 22/47 (46%)
 Frame = +2

Query: 380 FPKATTSTTKTGRLRKRSHSLRPSHFSEPCPRHSLRPPTKRLSYQPL 520
           FP  TT+ T T  LR ++  L P+      P H L PP   L  Q L
Sbjct: 353 FPVQTTTATTTTALRVKNKPLGPAGSENEIPTHVL-PPCANLQAQKL 398


>AF058999-1|AAC14431.1|  465|Homo sapiens glial cell line-derived
           neurotrophic factor receptor alpha protein.
          Length = 465

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 18/47 (38%), Positives = 22/47 (46%)
 Frame = +2

Query: 380 FPKATTSTTKTGRLRKRSHSLRPSHFSEPCPRHSLRPPTKRLSYQPL 520
           FP  TT+ T T  LR ++  L P+      P H L PP   L  Q L
Sbjct: 358 FPVQTTTATTTTALRVKNKPLGPAGSENEIPTHVL-PPCANLQAQKL 403


>AF042080-1|AAB97371.1|  465|Homo sapiens glial cell line-derived
           neurotrophic factor receptor alpha protein.
          Length = 465

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 18/47 (38%), Positives = 22/47 (46%)
 Frame = +2

Query: 380 FPKATTSTTKTGRLRKRSHSLRPSHFSEPCPRHSLRPPTKRLSYQPL 520
           FP  TT+ T T  LR ++  L P+      P H L PP   L  Q L
Sbjct: 358 FPVQTTTATTTTALRVKNKPLGPAGSENEIPTHVL-PPCANLQAQKL 403


>AF038421-1|AAC39692.1|  465|Homo sapiens GPI-linked anchor protein
           protein.
          Length = 465

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 18/47 (38%), Positives = 22/47 (46%)
 Frame = +2

Query: 380 FPKATTSTTKTGRLRKRSHSLRPSHFSEPCPRHSLRPPTKRLSYQPL 520
           FP  TT+ T T  LR ++  L P+      P H L PP   L  Q L
Sbjct: 358 FPVQTTTATTTTALRVKNKPLGPAGSENEIPTHVL-PPCANLQAQKL 403


>AF038420-1|AAC39693.1|  465|Homo sapiens GPI-linked anchor protein
           protein.
          Length = 465

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 18/47 (38%), Positives = 22/47 (46%)
 Frame = +2

Query: 380 FPKATTSTTKTGRLRKRSHSLRPSHFSEPCPRHSLRPPTKRLSYQPL 520
           FP  TT+ T T  LR ++  L P+      P H L PP   L  Q L
Sbjct: 358 FPVQTTTATTTTALRVKNKPLGPAGSENEIPTHVL-PPCANLQAQKL 403


>AF332239-1|AAK13489.1|   68|Homo sapiens transcript Y 10 protein.
          Length = 68

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 440 LRPSHFSEPCPRHSLRPP 493
           L+P HF + CP H  +PP
Sbjct: 51  LKPGHFKKNCPSHKKKPP 68


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.310    0.129    0.362 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,371,002
Number of Sequences: 237096
Number of extensions: 1278562
Number of successful extensions: 6120
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6116
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)