Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS333H04f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF068714-2|AAC17807.1| 248|Caenorhabditis elegans Initiation fa... 168 2e-42
AF068714-3|AAM22022.1| 250|Caenorhabditis elegans Initiation fa... 165 2e-41
AF068714-4|AAK68676.1| 251|Caenorhabditis elegans Initiation fa... 164 4e-41
Z81546-5|CAB04454.2| 212|Caenorhabditis elegans Hypothetical pr... 133 8e-32
U41550-3|AAA83286.1| 228|Caenorhabditis elegans Initiation fact... 133 8e-32
AL117195-24|CAB55035.1| 201|Caenorhabditis elegans Hypothetical... 125 2e-29
AL117195-23|CAB60769.1| 240|Caenorhabditis elegans Hypothetical... 125 2e-29
AF214652-1|AAF62415.1| 201|Caenorhabditis elegans translation i... 125 2e-29
U64605-1|AAF98601.1| 212|Caenorhabditis elegans Initiation fact... 95 2e-20
AF214651-1|AAF62414.1| 212|Caenorhabditis elegans translation i... 95 2e-20
AF003150-1|AAB54215.1| 997|Caenorhabditis elegans Hypothetical ... 29 1.5
AF045642-12|AAD34648.1| 348|Caenorhabditis elegans Hypothetical... 29 2.7
Z71267-5|CAJ80828.1| 266|Caenorhabditis elegans Hypothetical pr... 28 4.7
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 28 4.7
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 27 6.2
Z50872-8|CAA90758.1| 865|Caenorhabditis elegans Hypothetical pr... 27 8.1
AL031269-3|CAA20334.1| 865|Caenorhabditis elegans Hypothetical ... 27 8.1
AF016443-2|AAC24272.1| 359|Caenorhabditis elegans Hypothetical ... 27 8.1
AB055111-1|BAB62292.1| 865|Caenorhabditis elegans VHA-6 protein. 27 8.1
>AF068714-2|AAC17807.1| 248|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform a protein.
Length = 248
Score = 168 bits (409), Expect = 2e-42
Identities = 76/159 (47%), Positives = 110/159 (69%), Gaps = 3/159 (1%)
Frame = +3
Query: 15 DRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKQGIRPMWEDDANKMG 194
DRNK WE+ L ++ FDTVEDFW LY+HI+ L G DY +FK+GI+PMWED N G
Sbjct: 46 DRNKEWEDCLKMVSLFDTVEDFWSLYNHIQSAGGLNWGSDYYLFKEGIKPMWEDVNNVQG 105
Query: 195 GRWLISLEKKQRFTDLDRFWLDVVLLLIGENF-ENSDEICGAVVNVRPKVDKIAIWTADA 371
GRWL+ ++K++R LD +WL++++ ++GE F E D ICGAVVNVR K DK+++WT DA
Sbjct: 106 GRWLVVVDKQRRTQLLDHYWLELLMAIVGEQFDEYGDYICGAVVNVRQKGDKVSLWTRDA 165
Query: 372 MKQHATIEIGKKLKEQLGIHGK--IGFQVHRDTMVKHSS 482
+ + IG+ LK++L I + ++VH+D+ + SS
Sbjct: 166 TRDDVNLRIGQVLKQKLSIPDTEILRYEVHKDSSARTSS 204
>AF068714-3|AAM22022.1| 250|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform c protein.
Length = 250
Score = 165 bits (400), Expect = 2e-41
Identities = 78/161 (48%), Positives = 111/161 (68%), Gaps = 5/161 (3%)
Frame = +3
Query: 15 DRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKQGIRPMWEDDANKMG 194
DRNK WE+ L ++ FDTVEDFW LY+HI+ L G DY +FK+GI+PMWED N G
Sbjct: 46 DRNKEWEDCLKMVSLFDTVEDFWSLYNHIQSAGGLNWGSDYYLFKEGIKPMWEDVNNVQG 105
Query: 195 GRWLISLEKK-QRFTD-LDRFWLDVVLLLIGENF-ENSDEICGAVVNVRPKVDKIAIWTA 365
GRWL+ ++K+ QR T LD +WL++++ ++GE F E D ICGAVVNVR K DK+++WT
Sbjct: 106 GRWLVVVDKQLQRRTQLLDHYWLELLMAIVGEQFDEYGDYICGAVVNVRQKGDKVSLWTR 165
Query: 366 DAMKQHATIEIGKKLKEQLGIHGK--IGFQVHRDTMVKHSS 482
DA + + IG+ LK++L I + ++VH+D+ + SS
Sbjct: 166 DATRDDVNLRIGQVLKQKLSIPDTEILRYEVHKDSSARTSS 206
>AF068714-4|AAK68676.1| 251|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform b protein.
Length = 251
Score = 164 bits (398), Expect = 4e-41
Identities = 78/162 (48%), Positives = 111/162 (68%), Gaps = 6/162 (3%)
Frame = +3
Query: 15 DRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKQGIRPMWEDDANKMG 194
DRNK WE+ L ++ FDTVEDFW LY+HI+ L G DY +FK+GI+PMWED N G
Sbjct: 46 DRNKEWEDCLKMVSLFDTVEDFWSLYNHIQSAGGLNWGSDYYLFKEGIKPMWEDVNNVQG 105
Query: 195 GRWLISLEKK--QRFTD-LDRFWLDVVLLLIGENF-ENSDEICGAVVNVRPKVDKIAIWT 362
GRWL+ ++K+ QR T LD +WL++++ ++GE F E D ICGAVVNVR K DK+++WT
Sbjct: 106 GRWLVVVDKQKLQRRTQLLDHYWLELLMAIVGEQFDEYGDYICGAVVNVRQKGDKVSLWT 165
Query: 363 ADAMKQHATIEIGKKLKEQLGIHGK--IGFQVHRDTMVKHSS 482
DA + + IG+ LK++L I + ++VH+D+ + SS
Sbjct: 166 RDATRDDVNLRIGQVLKQKLSIPDTEILRYEVHKDSSARTSS 207
>Z81546-5|CAB04454.2| 212|Caenorhabditis elegans Hypothetical
protein F53A2.6 protein.
Length = 212
Score = 133 bits (321), Expect = 8e-32
Identities = 61/141 (43%), Positives = 90/141 (63%), Gaps = 1/141 (0%)
Frame = +3
Query: 3 FYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKQGIRPMWEDDA 182
+ +++RNK+WE+ L ++ TF+TV +FW LY I+ PS L DY VF+ I+PMWE
Sbjct: 22 YLNDERNKSWEDRLKKVYTFNTVSEFWALYDAIRPPSGLNALCDYNVFRDDIQPMWEVPE 81
Query: 183 NKMGGRWLISLEKKQRFTDLDRFWLDVVLLLIGENF-ENSDEICGAVVNVRPKVDKIAIW 359
N GGRWLI ++K + +D WL++++ L+GE F ++ + ICG V NVR K KI++W
Sbjct: 82 NSNGGRWLIVIDKGKTPEMVDAIWLEILMALVGEQFGKDMESICGLVCNVRGKGSKISVW 141
Query: 360 TADAMKQHATIEIGKKLKEQL 422
T D + IG LKE+L
Sbjct: 142 TKDCNDDETNMRIGVVLKEKL 162
>U41550-3|AAA83286.1| 228|Caenorhabditis elegans Initiation factor
4e (eif4e) familyprotein 2 protein.
Length = 228
Score = 133 bits (321), Expect = 8e-32
Identities = 60/141 (42%), Positives = 90/141 (63%), Gaps = 1/141 (0%)
Frame = +3
Query: 3 FYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKQGIRPMWEDDA 182
+ +++RNK+WEE L + TF +V +FW L+ IK PS L DY VF+ GI PMWE
Sbjct: 27 YLNDERNKSWEERLKNVKTFSSVGEFWALHDSIKPPSGLNPPSDYNVFRDGIEPMWEVPQ 86
Query: 183 NKMGGRWLISLEKKQRFTDLDRFWLDVVLLLIGENF-ENSDEICGAVVNVRPKVDKIAIW 359
N+ GGRWLI++EK + +D W ++++ +IGE F ++ + +CG V NVR K KI++W
Sbjct: 87 NQNGGRWLITIEKGRTPEIMDTIWTEILMAMIGEQFSDDIESLCGIVCNVRGKGSKISVW 146
Query: 360 TADAMKQHATIEIGKKLKEQL 422
T ++ A + IG LK+ L
Sbjct: 147 TTNSADDGANLRIGGVLKQVL 167
>AL117195-24|CAB55035.1| 201|Caenorhabditis elegans Hypothetical
protein Y57A10A.30b protein.
Length = 201
Score = 125 bits (302), Expect = 2e-29
Identities = 69/172 (40%), Positives = 98/172 (56%), Gaps = 11/172 (6%)
Frame = +3
Query: 3 FYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKQGIRPMWEDDA 182
F ++DRN +W++ L ++ TF+TV +FW Y I PS L DY VF+ I+P WE
Sbjct: 19 FLNDDRNASWQDRLKKVYTFNTVPEFWAFYEAILPPSGLNDLCDYNVFRDDIQPKWEAPE 78
Query: 183 NKMGGRWLISLEKKQRFTDLDRFWLDVVLLLIGENF-ENSDEICGAVVNVRPKVDKIAIW 359
N GGRWLI + K + LD WL+++L LIGE F ++ + ICG V NVR + KI++W
Sbjct: 79 NWDGGRWLIIINKGKTPEVLDAVWLEILLALIGEQFGKDMESICGLVCNVRGQGSKISVW 138
Query: 360 TADAMKQHATIEIGKKLKEQL-----GIHGK-----IGFQVHRDTMVKHSSA 485
T + + IG LKE+L H K I +Q HR+ + K +SA
Sbjct: 139 TKNCNDDDTNMRIGVVLKEKLMAAASKAHSKPLFDVIHYQTHRNCVKKTTSA 190
>AL117195-23|CAB60769.1| 240|Caenorhabditis elegans Hypothetical
protein Y57A10A.30a protein.
Length = 240
Score = 125 bits (302), Expect = 2e-29
Identities = 69/172 (40%), Positives = 98/172 (56%), Gaps = 11/172 (6%)
Frame = +3
Query: 3 FYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKQGIRPMWEDDA 182
F ++DRN +W++ L ++ TF+TV +FW Y I PS L DY VF+ I+P WE
Sbjct: 58 FLNDDRNASWQDRLKKVYTFNTVPEFWAFYEAILPPSGLNDLCDYNVFRDDIQPKWEAPE 117
Query: 183 NKMGGRWLISLEKKQRFTDLDRFWLDVVLLLIGENF-ENSDEICGAVVNVRPKVDKIAIW 359
N GGRWLI + K + LD WL+++L LIGE F ++ + ICG V NVR + KI++W
Sbjct: 118 NWDGGRWLIIINKGKTPEVLDAVWLEILLALIGEQFGKDMESICGLVCNVRGQGSKISVW 177
Query: 360 TADAMKQHATIEIGKKLKEQL-----GIHGK-----IGFQVHRDTMVKHSSA 485
T + + IG LKE+L H K I +Q HR+ + K +SA
Sbjct: 178 TKNCNDDDTNMRIGVVLKEKLMAAASKAHSKPLFDVIHYQTHRNCVKKTTSA 229
>AF214652-1|AAF62415.1| 201|Caenorhabditis elegans translation
initiation factor eIF4Eisoform 5 protein.
Length = 201
Score = 125 bits (302), Expect = 2e-29
Identities = 69/172 (40%), Positives = 98/172 (56%), Gaps = 11/172 (6%)
Frame = +3
Query: 3 FYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKQGIRPMWEDDA 182
F ++DRN +W++ L ++ TF+TV +FW Y I PS L DY VF+ I+P WE
Sbjct: 19 FLNDDRNASWQDRLKKVYTFNTVPEFWAFYEAILPPSGLNDLCDYNVFRDDIQPKWEAPE 78
Query: 183 NKMGGRWLISLEKKQRFTDLDRFWLDVVLLLIGENF-ENSDEICGAVVNVRPKVDKIAIW 359
N GGRWLI + K + LD WL+++L LIGE F ++ + ICG V NVR + KI++W
Sbjct: 79 NWDGGRWLIIINKGKTPEVLDAVWLEILLALIGEQFGKDMESICGLVCNVRGQGSKISVW 138
Query: 360 TADAMKQHATIEIGKKLKEQL-----GIHGK-----IGFQVHRDTMVKHSSA 485
T + + IG LKE+L H K I +Q HR+ + K +SA
Sbjct: 139 TKNCNDDDTNMRIGVVLKEKLMAAASKAHSKPLFDVIHYQTHRNCVKKTTSA 190
>U64605-1|AAF98601.1| 212|Caenorhabditis elegans Initiation factor
4e (eif4e) familyprotein 4 protein.
Length = 212
Score = 95.5 bits (227), Expect = 2e-20
Identities = 50/141 (35%), Positives = 79/141 (56%), Gaps = 2/141 (1%)
Frame = +3
Query: 66 TVEDFWRLYHHIKLPSELRQGHDYAVFKQGIRPMWEDDANKMGGRWLISLEKKQRFTDLD 245
+VE FW + H K P+E+ D FK G++P+WED AN GG+W+I L+K
Sbjct: 66 SVEQFWSIMVHFKRPTEMCDKADIHFFKTGVKPVWEDPANCKGGKWIIRLKKGLS----T 121
Query: 246 RFWLDVVLLLIGENFENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKE--Q 419
R W ++++ +IGE F DE+CGAV ++R + D I++W +A T I + L+ Q
Sbjct: 122 RIWENLLMAIIGEQFLVGDELCGAVCSIRNQEDIISLWNRNADDTPVTNRIRETLRSVLQ 181
Query: 420 LGIHGKIGFQVHRDTMVKHSS 482
L + + ++ H D + SS
Sbjct: 182 LPQNTVLEYKRHDDCLRDQSS 202
>AF214651-1|AAF62414.1| 212|Caenorhabditis elegans translation
initiation factor eIF4Eisoform 4 protein.
Length = 212
Score = 95.5 bits (227), Expect = 2e-20
Identities = 50/141 (35%), Positives = 79/141 (56%), Gaps = 2/141 (1%)
Frame = +3
Query: 66 TVEDFWRLYHHIKLPSELRQGHDYAVFKQGIRPMWEDDANKMGGRWLISLEKKQRFTDLD 245
+VE FW + H K P+E+ D FK G++P+WED AN GG+W+I L+K
Sbjct: 66 SVEQFWSIMVHFKRPTEMCDKADIHFFKTGVKPVWEDPANCKGGKWIIRLKKGLS----T 121
Query: 246 RFWLDVVLLLIGENFENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKE--Q 419
R W ++++ +IGE F DE+CGAV ++R + D I++W +A T I + L+ Q
Sbjct: 122 RIWENLLMAIIGEQFLVGDELCGAVCSIRNQEDIISLWNRNADDTPVTNRIRETLRSVLQ 181
Query: 420 LGIHGKIGFQVHRDTMVKHSS 482
L + + ++ H D + SS
Sbjct: 182 LPQNTVLEYKRHDDCLRDQSS 202
>AF003150-1|AAB54215.1| 997|Caenorhabditis elegans Hypothetical
protein T05E7.3 protein.
Length = 997
Score = 29.5 bits (63), Expect = 1.5
Identities = 28/100 (28%), Positives = 43/100 (43%)
Frame = +3
Query: 207 ISLEKKQRFTDLDRFWLDVVLLLIGENFENSDEICGAVVNVRPKVDKIAIWTADAMKQHA 386
I+ K RF++ W DV + +F+ D I K+ I T+ ++ H
Sbjct: 736 ITNPKASRFSESSLSWKDVKMSKTVLSFDVFDRI--------EKIVPFHILTS--IETHI 785
Query: 387 TIEIGKKLKEQLGIHGKIGFQVHRDTMVKHSSATXNLYTG 506
T+E+ K L E + KIG + V H SA +TG
Sbjct: 786 TVELEKMLIEYISNARKIGVSFNLQNSVTHESA-FQFFTG 824
>AF045642-12|AAD34648.1| 348|Caenorhabditis elegans Hypothetical
protein C17H12.8 protein.
Length = 348
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -2
Query: 331 LTLTTAPQISSEFSKFSPIKRRTTSNQNLSKSVKRCFFSRLISHLPPILLASSSHIG 161
LT T S++F F TT Q ++KSV R++ H +L + +H+G
Sbjct: 84 LTRTIVSSRSAKFVHFYIFPNTTTKFQVITKSVNMHSSFRIVVHFERMLNTTVTHLG 140
>Z71267-5|CAJ80828.1| 266|Caenorhabditis elegans Hypothetical
protein W01A8.7 protein.
Length = 266
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +3
Query: 120 RQGHDYAVFKQGIRPMWEDDANKMGGRWLISLEKKQRFTDLDRFWLDVV 266
+ GH Y K+ + WE + N G+W+ K++ +D+FW++V+
Sbjct: 227 KAGH-YQHLKKILYKKWESENN---GKWI-----KRKSNQVDKFWIEVI 266
>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/48 (25%), Positives = 21/48 (43%)
Frame = -2
Query: 310 QISSEFSKFSPIKRRTTSNQNLSKSVKRCFFSRLISHLPPILLASSSH 167
++ E K +KR + K C F + +S +L++SS H
Sbjct: 1345 RLEVEVKKNKGVKRSVVKKELTFADYKNCLFDKTVSRKQQMLISSSKH 1392
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 27.5 bits (58), Expect = 6.2
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = -2
Query: 310 QISSEFSKFSPIKRRTTSNQNLSKSVKRCFFSRLISHLPPILLASSSHIGRMP 152
Q S S S + ++T + SKS +RC+F L L+ SSS R P
Sbjct: 4 QASQRSSSTSAVAQKTRERRK-SKSRRRCWFGCLWLSSRVSLIRSSSRFSRSP 55
>Z50872-8|CAA90758.1| 865|Caenorhabditis elegans Hypothetical
protein VW02B12L.1 protein.
Length = 865
Score = 27.1 bits (57), Expect = 8.1
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +3
Query: 99 IKLPSELRQGHDYAVFKQGIRPMWEDDANKM 191
+ P E+ HDY + G+ P+W N++
Sbjct: 515 LTFPPEIAFNHDYGPYPFGVDPVWNLAINRL 545
>AL031269-3|CAA20334.1| 865|Caenorhabditis elegans Hypothetical
protein VW02B12L.1 protein.
Length = 865
Score = 27.1 bits (57), Expect = 8.1
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +3
Query: 99 IKLPSELRQGHDYAVFKQGIRPMWEDDANKM 191
+ P E+ HDY + G+ P+W N++
Sbjct: 515 LTFPPEIAFNHDYGPYPFGVDPVWNLAINRL 545
>AF016443-2|AAC24272.1| 359|Caenorhabditis elegans Hypothetical
protein C17E7.6 protein.
Length = 359
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -1
Query: 221 FLKTDKPSSSHLVSIVFPHRTNALLEYCIVM 129
F D P++ +VS + T+AL +YC++M
Sbjct: 279 FYDQDNPNAQQIVSAQQQNFTSALSQYCLLM 309
>AB055111-1|BAB62292.1| 865|Caenorhabditis elegans VHA-6 protein.
Length = 865
Score = 27.1 bits (57), Expect = 8.1
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +3
Query: 99 IKLPSELRQGHDYAVFKQGIRPMWEDDANKM 191
+ P E+ HDY + G+ P+W N++
Sbjct: 515 LTFPPEIAFNHDYGPYPFGVDPVWNLAINRL 545
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,211,176
Number of Sequences: 27780
Number of extensions: 215533
Number of successful extensions: 580
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 568
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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