Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS333H03f
         (442 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0875 - 7265529-7265588,7265681-7265746,7266008-7266293,726...   117   4e-27
07_01_0360 + 2646279-2646283,2647113-2647398,2648043-2648108,264...   116   8e-27
05_04_0167 + 18668004-18668287,18668961-18669043,18669346-186694...    27   5.1  
11_03_0206 + 11655132-11655232,11655433-11655823                       27   8.8  
06_01_1127 + 9294079-9294193,9294300-9294369,9294611-9294716,929...    27   8.8  

>07_01_0875 -
           7265529-7265588,7265681-7265746,7266008-7266293,
           7267138-7267142
          Length = 138

 Score =  117 bits (282), Expect = 4e-27
 Identities = 54/94 (57%), Positives = 68/94 (72%)
 Frame = -3

Query: 362 EAAKALXKRQAVLCVLAENCDEAAYKKLVQALCNXHQIPLVKVXXXKKLGEWAGXXKIXK 183
           EAAKA+ K  A LCVLAE+CD+  Y KLV+ALC  H + LV V   K LGEWAG  KI  
Sbjct: 44  EAAKAIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDS 103

Query: 182 DXKXRKIVGCSCVVIKDFGEETPALDVLKXXLKS 81
           + K RK+VGCSCVV+KDFGEE+  L++++  +KS
Sbjct: 104 EGKARKVVGCSCVVVKDFGEESEGLNIVQDYVKS 137


>07_01_0360 +
           2646279-2646283,2647113-2647398,2648043-2648108,
           2648199-2648258
          Length = 138

 Score =  116 bits (279), Expect = 8e-27
 Identities = 53/94 (56%), Positives = 68/94 (72%)
 Frame = -3

Query: 362 EAAKALXKRQAVLCVLAENCDEAAYKKLVQALCNXHQIPLVKVXXXKKLGEWAGXXKIXK 183
           EAAKA+ K  A LCVLAE+CD+  Y KLV+ALC  H + LV V   K LGEWAG  KI  
Sbjct: 44  EAAKAIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDS 103

Query: 182 DXKXRKIVGCSCVVIKDFGEETPALDVLKXXLKS 81
           + K RK+VGCSCVV+KD+GEE+  L++++  +KS
Sbjct: 104 EGKARKVVGCSCVVVKDYGEESEGLNIVQDYVKS 137


>05_04_0167 +
           18668004-18668287,18668961-18669043,18669346-18669434,
           18670085-18670158,18670234-18670284,18671486-18671553,
           18671666-18672234,18672333-18672383
          Length = 422

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +2

Query: 245 VESDXRCTEPEQVSCMRLHHSSQPKHIVLLA 337
           +ES  + TEP +   + LH +S+P  +VL A
Sbjct: 268 IESSMQRTEPYKFPSLGLHSNSKPSSVVLSA 298


>11_03_0206 + 11655132-11655232,11655433-11655823
          Length = 163

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 367 RPCTRPPWD*SCL*H 411
           RPC +PPW   CL H
Sbjct: 96  RPCLQPPWGRLCLSH 110


>06_01_1127 +
           9294079-9294193,9294300-9294369,9294611-9294716,
           9295665-9295805,9296377-9296475
          Length = 176

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 18/57 (31%), Positives = 24/57 (42%)
 Frame = -3

Query: 362 EAAKALXKRQAVLCVLAENCDEAAYKKLVQALCNXHQIPLVKVXXXKKLGEWAGXXK 192
           E  K++ + Q  LC++A N         V  LC    IP V V   + L   AG  K
Sbjct: 51  EVVKSIRRGQKGLCIIAGNISPIDVITHVPILCEEANIPYVYVPSKEDLAT-AGTTK 106


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,497,883
Number of Sequences: 37544
Number of extensions: 124648
Number of successful extensions: 269
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 269
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 835800280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)