Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS333H03f
(442 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC095424-1|AAH95424.1| 132|Homo sapiens ribosomal protein S12 p... 127 1e-29
BC071930-1|AAH71930.1| 132|Homo sapiens ribosomal protein S12 p... 127 1e-29
BC017321-1|AAH17321.1| 132|Homo sapiens ribosomal protein S12 p... 127 1e-29
AL137783-3|CAC12946.1| 132|Homo sapiens ribosomal protein S12 p... 127 1e-29
AB061840-1|BAB79478.1| 132|Homo sapiens ribosomal protein S12 p... 127 1e-29
X53505-1|CAA37582.1| 132|Homo sapiens ribosomal protein S12 pro... 119 5e-27
>BC095424-1|AAH95424.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 127 bits (307), Expect = 1e-29
Identities = 59/93 (63%), Positives = 70/93 (75%)
Frame = -3
Query: 362 EAAKALXKRQAVLCVLAENCDEAAYKKLVQALCNXHQIPLVKVXXXKKLGEWAGXXKIXK 183
EAAKAL KRQA LCVLA NCDE Y KLV+ALC HQI L+KV KKLGEW G KI +
Sbjct: 37 EAAKALDKRQAHLCVLASNCDEPMYVKLVEALCAEHQINLIKVDDNKKLGEWVGLCKIDR 96
Query: 182 DXKXRKIVGCSCVVIKDFGEETPALDVLKXXLK 84
+ K RK+VGCSCVV+KD+G+E+ A DV++ K
Sbjct: 97 EGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
Score = 31.9 bits (69), Expect = 1.0
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -2
Query: 438 MDVNVALQEVLKTALI 391
MDVN ALQEVLKTALI
Sbjct: 12 MDVNTALQEVLKTALI 27
>BC071930-1|AAH71930.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 127 bits (307), Expect = 1e-29
Identities = 59/93 (63%), Positives = 70/93 (75%)
Frame = -3
Query: 362 EAAKALXKRQAVLCVLAENCDEAAYKKLVQALCNXHQIPLVKVXXXKKLGEWAGXXKIXK 183
EAAKAL KRQA LCVLA NCDE Y KLV+ALC HQI L+KV KKLGEW G KI +
Sbjct: 37 EAAKALDKRQAHLCVLASNCDEPMYVKLVEALCAEHQINLIKVDDNKKLGEWVGLCKIDR 96
Query: 182 DXKXRKIVGCSCVVIKDFGEETPALDVLKXXLK 84
+ K RK+VGCSCVV+KD+G+E+ A DV++ K
Sbjct: 97 EGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
Score = 31.9 bits (69), Expect = 1.0
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -2
Query: 438 MDVNVALQEVLKTALI 391
MDVN ALQEVLKTALI
Sbjct: 12 MDVNTALQEVLKTALI 27
>BC017321-1|AAH17321.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 127 bits (307), Expect = 1e-29
Identities = 59/93 (63%), Positives = 70/93 (75%)
Frame = -3
Query: 362 EAAKALXKRQAVLCVLAENCDEAAYKKLVQALCNXHQIPLVKVXXXKKLGEWAGXXKIXK 183
EAAKAL KRQA LCVLA NCDE Y KLV+ALC HQI L+KV KKLGEW G KI +
Sbjct: 37 EAAKALDKRQAHLCVLASNCDEPMYVKLVEALCAEHQINLIKVDDNKKLGEWVGLCKIDR 96
Query: 182 DXKXRKIVGCSCVVIKDFGEETPALDVLKXXLK 84
+ K RK+VGCSCVV+KD+G+E+ A DV++ K
Sbjct: 97 EGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
Score = 31.9 bits (69), Expect = 1.0
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -2
Query: 438 MDVNVALQEVLKTALI 391
MDVN ALQEVLKTALI
Sbjct: 12 MDVNTALQEVLKTALI 27
>AL137783-3|CAC12946.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 127 bits (307), Expect = 1e-29
Identities = 59/93 (63%), Positives = 70/93 (75%)
Frame = -3
Query: 362 EAAKALXKRQAVLCVLAENCDEAAYKKLVQALCNXHQIPLVKVXXXKKLGEWAGXXKIXK 183
EAAKAL KRQA LCVLA NCDE Y KLV+ALC HQI L+KV KKLGEW G KI +
Sbjct: 37 EAAKALDKRQAHLCVLASNCDEPMYVKLVEALCAEHQINLIKVDDNKKLGEWVGLCKIDR 96
Query: 182 DXKXRKIVGCSCVVIKDFGEETPALDVLKXXLK 84
+ K RK+VGCSCVV+KD+G+E+ A DV++ K
Sbjct: 97 EGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
Score = 31.9 bits (69), Expect = 1.0
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -2
Query: 438 MDVNVALQEVLKTALI 391
MDVN ALQEVLKTALI
Sbjct: 12 MDVNTALQEVLKTALI 27
>AB061840-1|BAB79478.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 127 bits (307), Expect = 1e-29
Identities = 59/93 (63%), Positives = 70/93 (75%)
Frame = -3
Query: 362 EAAKALXKRQAVLCVLAENCDEAAYKKLVQALCNXHQIPLVKVXXXKKLGEWAGXXKIXK 183
EAAKAL KRQA LCVLA NCDE Y KLV+ALC HQI L+KV KKLGEW G KI +
Sbjct: 37 EAAKALDKRQAHLCVLASNCDEPMYVKLVEALCAEHQINLIKVDDNKKLGEWVGLCKIDR 96
Query: 182 DXKXRKIVGCSCVVIKDFGEETPALDVLKXXLK 84
+ K RK+VGCSCVV+KD+G+E+ A DV++ K
Sbjct: 97 EGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
Score = 31.9 bits (69), Expect = 1.0
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -2
Query: 438 MDVNVALQEVLKTALI 391
MDVN ALQEVLKTALI
Sbjct: 12 MDVNTALQEVLKTALI 27
>X53505-1|CAA37582.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 119 bits (286), Expect = 5e-27
Identities = 56/93 (60%), Positives = 67/93 (72%)
Frame = -3
Query: 362 EAAKALXKRQAVLCVLAENCDEAAYKKLVQALCNXHQIPLVKVXXXKKLGEWAGXXKIXK 183
EAAKAL KRQA LCV A NCDE Y KLV+AL HQI L+KV KKLGEW G KI +
Sbjct: 37 EAAKALDKRQAHLCVQASNCDEPMYVKLVEALLAEHQINLIKVDDNKKLGEWVGLCKIDR 96
Query: 182 DXKXRKIVGCSCVVIKDFGEETPALDVLKXXLK 84
+ RK+VGCSCVV+KD+G+E+ A DV++ K
Sbjct: 97 EGNPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
Score = 31.9 bits (69), Expect = 1.0
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -2
Query: 438 MDVNVALQEVLKTALI 391
MDVN ALQEVLKTALI
Sbjct: 12 MDVNTALQEVLKTALI 27
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,534,712
Number of Sequences: 237096
Number of extensions: 725054
Number of successful extensions: 1162
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1162
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3602345922
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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