Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS333H03f
(442 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X89659-1|CAA61806.1| 151|Drosophila melanogaster 40S ribosomal ... 137 7e-33
AY058531-1|AAL13760.1| 139|Drosophila melanogaster LD23808p pro... 137 7e-33
AE014296-2235|AAN11844.2| 139|Drosophila melanogaster CG11271-P... 137 7e-33
AE014296-2234|AAN11845.1| 139|Drosophila melanogaster CG11271-P... 137 7e-33
U10328-1|AAB60230.1| 455|Drosophila melanogaster MAD polypeptid... 28 6.5
BT004845-1|AAO45201.1| 455|Drosophila melanogaster RE72705p pro... 28 6.5
BT001803-1|AAN71558.1| 127|Drosophila melanogaster RH29995p pro... 28 6.5
AE014134-561|AAF51142.1| 455|Drosophila melanogaster CG12399-PA... 28 6.5
>X89659-1|CAA61806.1| 151|Drosophila melanogaster 40S ribosomal
protein S12 protein.
Length = 151
Score = 137 bits (331), Expect = 7e-33
Identities = 64/93 (68%), Positives = 74/93 (79%)
Frame = -3
Query: 362 EAAKALXKRQAVLCVLAENCDEAAYKKLVQALCNXHQIPLVKVXXXKKLGEWAGXXKIXK 183
+A KAL KRQAVLC+LAE+ DE YKKLV ALCN HQIPL++V KKLGEW+G KI K
Sbjct: 56 QACKALDKRQAVLCILAESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDK 115
Query: 182 DXKXRKIVGCSCVVIKDFGEETPALDVLKXXLK 84
+ K RK+ GCS VVIKDFGEETPALDV+K L+
Sbjct: 116 EGKPRKVCGCSVVVIKDFGEETPALDVVKDHLR 148
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -2
Query: 438 MDVNVALQEVLKTALI 391
MD+N ALQEVLK +LI
Sbjct: 31 MDINTALQEVLKKSLI 46
>AY058531-1|AAL13760.1| 139|Drosophila melanogaster LD23808p
protein.
Length = 139
Score = 137 bits (331), Expect = 7e-33
Identities = 64/93 (68%), Positives = 74/93 (79%)
Frame = -3
Query: 362 EAAKALXKRQAVLCVLAENCDEAAYKKLVQALCNXHQIPLVKVXXXKKLGEWAGXXKIXK 183
+A KAL KRQAVLC+LAE+ DE YKKLV ALCN HQIPL++V KKLGEW+G KI K
Sbjct: 44 QACKALDKRQAVLCILAESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDK 103
Query: 182 DXKXRKIVGCSCVVIKDFGEETPALDVLKXXLK 84
+ K RK+ GCS VVIKDFGEETPALDV+K L+
Sbjct: 104 EGKPRKVCGCSVVVIKDFGEETPALDVVKDHLR 136
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -2
Query: 438 MDVNVALQEVLKTALI 391
MD+N ALQEVLK +LI
Sbjct: 19 MDINTALQEVLKKSLI 34
>AE014296-2235|AAN11844.2| 139|Drosophila melanogaster CG11271-PC,
isoform C protein.
Length = 139
Score = 137 bits (331), Expect = 7e-33
Identities = 64/93 (68%), Positives = 74/93 (79%)
Frame = -3
Query: 362 EAAKALXKRQAVLCVLAENCDEAAYKKLVQALCNXHQIPLVKVXXXKKLGEWAGXXKIXK 183
+A KAL KRQAVLC+LAE+ DE YKKLV ALCN HQIPL++V KKLGEW+G KI K
Sbjct: 44 QACKALDKRQAVLCILAESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDK 103
Query: 182 DXKXRKIVGCSCVVIKDFGEETPALDVLKXXLK 84
+ K RK+ GCS VVIKDFGEETPALDV+K L+
Sbjct: 104 EGKPRKVCGCSVVVIKDFGEETPALDVVKDHLR 136
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -2
Query: 438 MDVNVALQEVLKTALI 391
MD+N ALQEVLK +LI
Sbjct: 19 MDINTALQEVLKKSLI 34
>AE014296-2234|AAN11845.1| 139|Drosophila melanogaster CG11271-PB,
isoform B protein.
Length = 139
Score = 137 bits (331), Expect = 7e-33
Identities = 64/93 (68%), Positives = 74/93 (79%)
Frame = -3
Query: 362 EAAKALXKRQAVLCVLAENCDEAAYKKLVQALCNXHQIPLVKVXXXKKLGEWAGXXKIXK 183
+A KAL KRQAVLC+LAE+ DE YKKLV ALCN HQIPL++V KKLGEW+G KI K
Sbjct: 44 QACKALDKRQAVLCILAESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDK 103
Query: 182 DXKXRKIVGCSCVVIKDFGEETPALDVLKXXLK 84
+ K RK+ GCS VVIKDFGEETPALDV+K L+
Sbjct: 104 EGKPRKVCGCSVVVIKDFGEETPALDVVKDHLR 136
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -2
Query: 438 MDVNVALQEVLKTALI 391
MD+N ALQEVLK +LI
Sbjct: 19 MDINTALQEVLKKSLI 34
>U10328-1|AAB60230.1| 455|Drosophila melanogaster MAD polypeptide
protein.
Length = 455
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +1
Query: 94 SLSTSNAGVSSPKSLMTTQEQPTIFLXLXSLXILXXPAHSPS 219
SLSTSN V SP S+ + P SL PA+SPS
Sbjct: 192 SLSTSNTSVGSPSSVNSNPNSP-----YDSLAGTPPPAYSPS 228
>BT004845-1|AAO45201.1| 455|Drosophila melanogaster RE72705p
protein.
Length = 455
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +1
Query: 94 SLSTSNAGVSSPKSLMTTQEQPTIFLXLXSLXILXXPAHSPS 219
SLSTSN V SP S+ + P SL PA+SPS
Sbjct: 192 SLSTSNTSVGSPSSVNSNPNSP-----YDSLAGTPPPAYSPS 228
>BT001803-1|AAN71558.1| 127|Drosophila melanogaster RH29995p
protein.
Length = 127
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -2
Query: 438 MDVNVALQEVLKTALI 391
MD+N ALQEVLK +LI
Sbjct: 35 MDINTALQEVLKKSLI 50
>AE014134-561|AAF51142.1| 455|Drosophila melanogaster CG12399-PA
protein.
Length = 455
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +1
Query: 94 SLSTSNAGVSSPKSLMTTQEQPTIFLXLXSLXILXXPAHSPS 219
SLSTSN V SP S+ + P SL PA+SPS
Sbjct: 192 SLSTSNTSVGSPSSVNSNPNSP-----YDSLAGTPPPAYSPS 228
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,270,105
Number of Sequences: 53049
Number of extensions: 214133
Number of successful extensions: 466
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 466
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1417837128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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