Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS333H01f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0207 + 21214631-21216121                                         29   1.7  
07_03_1783 + 29480987-29481165,29481526-29481685,29481767-294818...    27   6.9  
03_05_1129 - 30595580-30595771,30596119-30597162                       27   9.1  
01_06_0265 - 28011181-28011240,28011298-28011375,28011493-280118...    27   9.1  

>11_06_0207 + 21214631-21216121
          Length = 496

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = -1

Query: 236 GSPGKVRKYKKARNYIKTNNFVFPLMYPLDVSFIYRLRHYEVCRVS 99
           G P  +    + R+++    FVFP   PL  SFI  + HY  C++S
Sbjct: 211 GEPSPILTPSELRDHLYYKAFVFP--DPLTRSFIVVVIHYPFCQLS 254


>07_03_1783 + 29480987-29481165,29481526-29481685,29481767-29481862,
            29481948-29482062,29482175-29482337,29482536-29482707,
            29483924-29484013,29484137-29484598,29484675-29485268,
            29485486-29485554,29485810-29485902,29486432-29486677,
            29487277-29487417,29487748-29487828,29487911-29487973,
            29488059-29488166,29488303-29488383,29488474-29488521,
            29488979-29489053,29489973-29490068,29490156-29490236,
            29490295-29490402,29490989-29491033,29491119-29491202,
            29491379-29491482,29491581-29491728
          Length = 1233

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 17/48 (35%), Positives = 28/48 (58%)
 Frame = -1

Query: 371  SSIKNIELLVSTIISIYKNELLFVSLAKTRERLDRFG*FWS*IIRGSP 228
            S  K+IE+L + +  + K+E+L V  +     LD+F    S I++GSP
Sbjct: 968  SKTKDIEVLFAVLAHLPKDEVLPVFPSIVNLPLDKFQVALSRILQGSP 1015


>03_05_1129 - 30595580-30595771,30596119-30597162
          Length = 411

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +2

Query: 155 DTSKEKQNCLFLYNFELFYIFSPSLDFHE*FKTKISQIGPAVLE 286
           D  +    C+    FE  Y+FSP   +    K     +GPA+LE
Sbjct: 347 DRGRRNSICVQRRGFEEVYVFSPGSKYQWYGKYAYVCVGPAMLE 390


>01_06_0265 -
           28011181-28011240,28011298-28011375,28011493-28011802,
           28012913-28013533,28013733-28013818
          Length = 384

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 18/56 (32%), Positives = 34/56 (60%)
 Frame = -1

Query: 308 LFVSLAKTRERLDRFG*FWS*IIRGSPGKVRKYKKARNYIKTNNFVFPLMYPLDVS 141
           +++SL++ +E+ D F      I++G+    R  K+A+N  KT  +VFP M+  D++
Sbjct: 302 IYISLSR-KEKEDDFL-----IMKGTKLPQRPKKRAKNVDKTLQYVFPGMWLSDLT 351


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,584,375
Number of Sequences: 37544
Number of extensions: 168419
Number of successful extensions: 345
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 345
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)