Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS333G09f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain, ... 69 3e-12
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 64 6e-11
U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain, un... 61 5e-10
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 60 1e-09
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 60 1e-09
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 60 1e-09
Z35603-1|CAA84673.1| 1017|Caenorhabditis elegans Hypothetical pr... 57 9e-09
X75564-1|CAA53244.1| 1017|Caenorhabditis elegans myosin IA protein. 57 9e-09
Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical pr... 54 6e-08
U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein. 54 6e-08
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 54 8e-08
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 54 8e-08
Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical pr... 53 1e-07
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 52 2e-07
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 52 2e-07
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 52 2e-07
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 52 3e-07
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 52 3e-07
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 52 3e-07
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 50 1e-06
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 50 1e-06
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 50 1e-06
Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical p... 49 2e-06
U53181-2|AAR04675.1| 1837|Caenorhabditis elegans Heavy chain, un... 49 2e-06
U53181-1|AAR04676.1| 1839|Caenorhabditis elegans Heavy chain, un... 49 2e-06
U52516-1|AAA97926.1| 1839|Caenorhabditis elegans hum-2 protein. 49 2e-06
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 48 3e-06
U52517-1|AAA97927.1| 846|Caenorhabditis elegans hum-3 protein. 42 2e-04
AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective spe... 42 4e-04
AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain, ... 40 0.001
AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain, ... 40 0.001
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 25 2.6
U28928-1|AAA68334.3| 589|Caenorhabditis elegans Anchor cell fus... 29 2.7
EF205023-1|ABP04049.1| 589|Caenorhabditis elegans anchor cell f... 29 2.7
Z68493-7|CAA92793.1| 339|Caenorhabditis elegans Hypothetical pr... 27 6.2
AL117206-1|CAB60446.1| 644|Caenorhabditis elegans Hypothetical ... 27 6.2
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 27 8.1
>AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 7 protein.
Length = 1887
Score = 68.5 bits (160), Expect = 3e-12
Identities = 34/81 (41%), Positives = 48/81 (59%)
Frame = -3
Query: 495 YVRCIXPNEKKEAGKYNEQLVLEQLRYLGMNEIVRIRRDGYPVHLPTPMFQARYRCLLPH 316
++RCI N K A +++ ++L QLRY GM E VRIRR GY V + P F +YR LL +
Sbjct: 850 FIRCIKSNNDKIANHFDDNIILRQLRYTGMLETVRIRRAGYSVRIEYPSFVQQYRILLRN 909
Query: 315 PRPSCPDIA*VFILTHSRWDS 253
R S D +I +H+ D+
Sbjct: 910 GRDSTVDDVKEYIHSHASIDN 930
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 64.1 bits (149), Expect = 6e-11
Identities = 31/63 (49%), Positives = 40/63 (63%)
Frame = -3
Query: 495 YVRCIXPNEKKEAGKYNEQLVLEQLRYLGMNEIVRIRRDGYPVHLPTPMFQARYRCLLPH 316
+VRCI PN +K++GK N LVLEQLR G+ E +RI R G+P +P F+ RY L P
Sbjct: 674 FVRCIIPNHEKKSGKINSNLVLEQLRCNGVLEGIRICRQGFPNRVPFQEFRHRYEILTPD 733
Query: 315 PRP 307
P
Sbjct: 734 VIP 736
>U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 6 protein.
Length = 2098
Score = 60.9 bits (141), Expect = 5e-10
Identities = 29/58 (50%), Positives = 36/58 (62%)
Frame = -3
Query: 495 YVRCIXPNEKKEAGKYNEQLVLEQLRYLGMNEIVRIRRDGYPVHLPTPMFQARYRCLL 322
++RCI PNE K A + LVL QLRY GM E ++IRR GYP+ F RYR L+
Sbjct: 623 FIRCIKPNEMKRALVMDRDLVLRQLRYSGMMETIKIRRSGYPIRHDYYPFVFRYRVLV 680
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 59.7 bits (138), Expect = 1e-09
Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = -3
Query: 495 YVRCIXPNEKKEAGKYNEQLVLEQLRYLGMNEIVRIRRDGYPVHLPTPMFQARYRCLL-P 319
+VRCI PN +K+ G N LVL+QLR G+ E +RI R G+P LP F+ RY LL P
Sbjct: 684 FVRCIIPNHEKKHGVLNAHLVLDQLRCNGVLEGIRICRQGFPTRLPFQEFRQRYEKLLAP 743
Query: 318 HPRPS 304
P+
Sbjct: 744 DVNPA 748
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 59.7 bits (138), Expect = 1e-09
Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = -3
Query: 495 YVRCIXPNEKKEAGKYNEQLVLEQLRYLGMNEIVRIRRDGYPVHLPTPMFQARYRCLL-P 319
+VRCI PN +K+ G N LVL+QLR G+ E +RI R G+P LP F+ RY LL P
Sbjct: 684 FVRCIIPNHEKKHGVLNAHLVLDQLRCNGVLEGIRICRQGFPTRLPFQEFRQRYEKLLAP 743
Query: 318 HPRPS 304
P+
Sbjct: 744 DVNPA 748
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 59.7 bits (138), Expect = 1e-09
Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = -3
Query: 495 YVRCIXPNEKKEAGKYNEQLVLEQLRYLGMNEIVRIRRDGYPVHLPTPMFQARYRCLL-P 319
+VRCI PN +K+ G N LVL+QLR G+ E +RI R G+P LP F+ RY LL P
Sbjct: 684 FVRCIIPNHEKKHGVLNAHLVLDQLRCNGVLEGIRICRQGFPTRLPFQEFRQRYEKLLAP 743
Query: 318 HPRPS 304
P+
Sbjct: 744 DVNPA 748
>Z35603-1|CAA84673.1| 1017|Caenorhabditis elegans Hypothetical
protein T02C12.1 protein.
Length = 1017
Score = 56.8 bits (131), Expect = 9e-09
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = -3
Query: 495 YVRCIXPNEKKEAGKYNEQLVLEQLRYLGMNEIVRIRRDGYPVHLPTPMFQARYR--CLL 322
Y+RCI PNE+K + ++ + V Q+RYLG+ E VR+RR G+ +P F RY+ C
Sbjct: 590 YIRCIKPNEEKNSNVFDLERVEHQVRYLGLLENVRVRRAGFAHRMPYDRFVNRYKLICAS 649
Query: 321 PHPRP 307
P P
Sbjct: 650 TWPNP 654
>X75564-1|CAA53244.1| 1017|Caenorhabditis elegans myosin IA protein.
Length = 1017
Score = 56.8 bits (131), Expect = 9e-09
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = -3
Query: 495 YVRCIXPNEKKEAGKYNEQLVLEQLRYLGMNEIVRIRRDGYPVHLPTPMFQARYR--CLL 322
Y+RCI PNE+K + ++ + V Q+RYLG+ E VR+RR G+ +P F RY+ C
Sbjct: 590 YIRCIKPNEEKNSNVFDLERVEHQVRYLGLLENVRVRRAGFAHRMPYDRFVNRYKLICAS 649
Query: 321 PHPRP 307
P P
Sbjct: 650 TWPNP 654
>Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical
protein F29D10.4 protein.
Length = 1100
Score = 54.0 bits (124), Expect = 6e-08
Identities = 25/63 (39%), Positives = 32/63 (50%)
Frame = -3
Query: 495 YVRCIXPNEKKEAGKYNEQLVLEQLRYLGMNEIVRIRRDGYPVHLPTPMFQARYRCLLPH 316
YVRCI PNE K + E V Q+ YLG+ E +R+RR G+ F RY + P
Sbjct: 581 YVRCIKPNETKRPNDWEESRVKHQVEYLGLRENIRVRRAGFAYRRAFDKFAQRYAIVSPQ 640
Query: 315 PRP 307
P
Sbjct: 641 TWP 643
>U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein.
Length = 1036
Score = 54.0 bits (124), Expect = 6e-08
Identities = 25/63 (39%), Positives = 32/63 (50%)
Frame = -3
Query: 495 YVRCIXPNEKKEAGKYNEQLVLEQLRYLGMNEIVRIRRDGYPVHLPTPMFQARYRCLLPH 316
YVRCI PNE K + E V Q+ YLG+ E +R+RR G+ F RY + P
Sbjct: 518 YVRCIKPNETKRPNDWEESRVKHQVEYLGLRENIRVRRAGFAYRRAFDKFAQRYAIVSPQ 577
Query: 315 PRP 307
P
Sbjct: 578 TWP 580
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 53.6 bits (123), Expect = 8e-08
Identities = 28/68 (41%), Positives = 37/68 (54%)
Frame = -3
Query: 495 YVRCIXPNEKKEAGKYNEQLVLEQLRYLGMNEIVRIRRDGYPVHLPTPMFQARYRCLLPH 316
++RCI PNEKK++G + LVL QL G+ E +RI R G+P P F RY L
Sbjct: 674 FIRCIIPNEKKQSGMIDAALVLNQLTCNGVLEGIRICRKGFPNRTQHPDFVQRYAILAAK 733
Query: 315 PRPSCPDI 292
S D+
Sbjct: 734 EAKSSDDM 741
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 53.6 bits (123), Expect = 8e-08
Identities = 28/68 (41%), Positives = 37/68 (54%)
Frame = -3
Query: 495 YVRCIXPNEKKEAGKYNEQLVLEQLRYLGMNEIVRIRRDGYPVHLPTPMFQARYRCLLPH 316
++RCI PNEKK++G + LVL QL G+ E +RI R G+P P F RY L
Sbjct: 674 FIRCIIPNEKKQSGMIDAALVLNQLTCNGVLEGIRICRKGFPNRTQHPDFVQRYAILAAK 733
Query: 315 PRPSCPDI 292
S D+
Sbjct: 734 EAKSSDDM 741
>Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical
protein F46C3.3 protein.
Length = 2557
Score = 53.2 bits (122), Expect = 1e-07
Identities = 24/65 (36%), Positives = 38/65 (58%)
Frame = -3
Query: 495 YVRCIXPNEKKEAGKYNEQLVLEQLRYLGMNEIVRIRRDGYPVHLPTPMFQARYRCLLPH 316
+VRCI N ++++ K++ LV Q++ L + E++ R GYPV + F +YRCLLP
Sbjct: 551 FVRCIKSNNERQSTKFDIPLVNRQIKNLLLAELLSFRVKGYPVKISKTTFARQYRCLLPG 610
Query: 315 PRPSC 301
C
Sbjct: 611 DIAQC 615
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical
protein K12F2.1 protein.
Length = 1969
Score = 52.4 bits (120), Expect = 2e-07
Identities = 26/57 (45%), Positives = 35/57 (61%)
Frame = -3
Query: 495 YVRCIXPNEKKEAGKYNEQLVLEQLRYLGMNEIVRIRRDGYPVHLPTPMFQARYRCL 325
++RCI PNEKK +G + LVL QL G+ E +RI R G+P + P F+ RY L
Sbjct: 681 FIRCIIPNEKKASGVIDSALVLNQLTCNGVLEGIRICRKGFPNRMLYPDFKHRYAIL 737
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain
3 protein.
Length = 1969
Score = 52.4 bits (120), Expect = 2e-07
Identities = 26/57 (45%), Positives = 35/57 (61%)
Frame = -3
Query: 495 YVRCIXPNEKKEAGKYNEQLVLEQLRYLGMNEIVRIRRDGYPVHLPTPMFQARYRCL 325
++RCI PNEKK +G + LVL QL G+ E +RI R G+P + P F+ RY L
Sbjct: 681 FIRCIIPNEKKASGVIDSALVLNQLTCNGVLEGIRICRKGFPNRMLYPDFKHRYAIL 737
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical
protein F58G4.1 protein.
Length = 1974
Score = 52.4 bits (120), Expect = 2e-07
Identities = 26/57 (45%), Positives = 35/57 (61%)
Frame = -3
Query: 495 YVRCIXPNEKKEAGKYNEQLVLEQLRYLGMNEIVRIRRDGYPVHLPTPMFQARYRCL 325
++RCI PNE K+AG + LVL QL G+ E +RI R G+P +P F+ RY L
Sbjct: 677 FIRCIIPNELKKAGMIDANLVLNQLTCNGVLEGIRICRKGFPNRMPFLDFKQRYAVL 733
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 51.6 bits (118), Expect = 3e-07
Identities = 26/57 (45%), Positives = 34/57 (59%)
Frame = -3
Query: 495 YVRCIXPNEKKEAGKYNEQLVLEQLRYLGMNEIVRIRRDGYPVHLPTPMFQARYRCL 325
++RCI PNEKK++G + LVL QL G+ E +RI R G+P P F RY L
Sbjct: 676 FIRCIIPNEKKQSGMIDAALVLNQLTCNGVLEGIRICRKGFPNRTLHPDFVQRYAIL 732
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 51.6 bits (118), Expect = 3e-07
Identities = 26/57 (45%), Positives = 34/57 (59%)
Frame = -3
Query: 495 YVRCIXPNEKKEAGKYNEQLVLEQLRYLGMNEIVRIRRDGYPVHLPTPMFQARYRCL 325
++RCI PNEKK++G + LVL QL G+ E +RI R G+P P F RY L
Sbjct: 676 FIRCIIPNEKKQSGMIDAALVLNQLTCNGVLEGIRICRKGFPNRTLHPDFVQRYAIL 732
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 51.6 bits (118), Expect = 3e-07
Identities = 26/57 (45%), Positives = 34/57 (59%)
Frame = -3
Query: 495 YVRCIXPNEKKEAGKYNEQLVLEQLRYLGMNEIVRIRRDGYPVHLPTPMFQARYRCL 325
++RCI PNEKK++G + LVL QL G+ E +RI R G+P P F RY L
Sbjct: 679 FIRCIIPNEKKQSGMIDAALVLNQLTCNGVLEGIRICRKGFPNRTLHPDFVQRYAIL 735
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/68 (39%), Positives = 36/68 (52%)
Frame = -3
Query: 495 YVRCIXPNEKKEAGKYNEQLVLEQLRYLGMNEIVRIRRDGYPVHLPTPMFQARYRCLLPH 316
++RCI P EKK++G + LVL QL G+ E +RI R G+P P F RY L
Sbjct: 674 FIRCIIPIEKKQSGMIDAALVLNQLTCNGVLEGIRICRKGFPNRTQHPDFVQRYAILAAK 733
Query: 315 PRPSCPDI 292
S D+
Sbjct: 734 EAKSSDDM 741
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical
protein T18D3.4 protein.
Length = 1947
Score = 49.6 bits (113), Expect = 1e-06
Identities = 26/57 (45%), Positives = 33/57 (57%)
Frame = -3
Query: 495 YVRCIXPNEKKEAGKYNEQLVLEQLRYLGMNEIVRIRRDGYPVHLPTPMFQARYRCL 325
++RCI PNEKK +G + LVL QL G+ E +RI R G+P P F RY L
Sbjct: 682 FIRCIIPNEKKASGVIDAGLVLNQLTCNGVLEGIRICRKGFPNRTLHPDFVQRYALL 738
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical
protein T18D3.4 protein.
Length = 1947
Score = 49.6 bits (113), Expect = 1e-06
Identities = 26/57 (45%), Positives = 33/57 (57%)
Frame = -3
Query: 495 YVRCIXPNEKKEAGKYNEQLVLEQLRYLGMNEIVRIRRDGYPVHLPTPMFQARYRCL 325
++RCI PNEKK +G + LVL QL G+ E +RI R G+P P F RY L
Sbjct: 682 FIRCIIPNEKKASGVIDAGLVLNQLTCNGVLEGIRICRKGFPNRTLHPDFVQRYALL 738
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain
2 protein.
Length = 1947
Score = 49.6 bits (113), Expect = 1e-06
Identities = 26/57 (45%), Positives = 33/57 (57%)
Frame = -3
Query: 495 YVRCIXPNEKKEAGKYNEQLVLEQLRYLGMNEIVRIRRDGYPVHLPTPMFQARYRCL 325
++RCI PNEKK +G + LVL QL G+ E +RI R G+P P F RY L
Sbjct: 682 FIRCIIPNEKKASGVIDAGLVLNQLTCNGVLEGIRICRKGFPNRTLHPDFVQRYALL 738
>Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical
protein F45G2.2a protein.
Length = 1235
Score = 49.2 bits (112), Expect = 2e-06
Identities = 25/57 (43%), Positives = 34/57 (59%)
Frame = -3
Query: 495 YVRCIXPNEKKEAGKYNEQLVLEQLRYLGMNEIVRIRRDGYPVHLPTPMFQARYRCL 325
++RCI PNEKK +G + LVL QL G+ E +RI R G+P + F+ RY L
Sbjct: 671 FIRCIIPNEKKTSGLIDAPLVLNQLTCNGVLEGIRICRKGFPNRMMFADFRFRYAIL 727
>U53181-2|AAR04675.1| 1837|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 2, isoform a protein.
Length = 1837
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/57 (40%), Positives = 32/57 (56%)
Frame = -3
Query: 495 YVRCIXPNEKKEAGKYNEQLVLEQLRYLGMNEIVRIRRDGYPVHLPTPMFQARYRCL 325
YVRCI PN+ K + + + ++QLR G+ E VRI G+P P F RYR +
Sbjct: 697 YVRCIKPNDSKISFDFEPKRAIQQLRACGVLETVRISAAGFPSRYPYEEFARRYRVI 753
>U53181-1|AAR04676.1| 1839|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 2, isoform b protein.
Length = 1839
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/57 (40%), Positives = 32/57 (56%)
Frame = -3
Query: 495 YVRCIXPNEKKEAGKYNEQLVLEQLRYLGMNEIVRIRRDGYPVHLPTPMFQARYRCL 325
YVRCI PN+ K + + + ++QLR G+ E VRI G+P P F RYR +
Sbjct: 697 YVRCIKPNDSKISFDFEPKRAIQQLRACGVLETVRISAAGFPSRYPYEEFARRYRVI 753
>U52516-1|AAA97926.1| 1839|Caenorhabditis elegans hum-2 protein.
Length = 1839
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/57 (40%), Positives = 32/57 (56%)
Frame = -3
Query: 495 YVRCIXPNEKKEAGKYNEQLVLEQLRYLGMNEIVRIRRDGYPVHLPTPMFQARYRCL 325
YVRCI PN+ K + + + ++QLR G+ E VRI G+P P F RYR +
Sbjct: 697 YVRCIKPNDSKISFDFEPKRAIQQLRACGVLETVRISAAGFPSRYPYEEFARRYRVI 753
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 48.4 bits (110), Expect = 3e-06
Identities = 25/64 (39%), Positives = 36/64 (56%)
Frame = -3
Query: 495 YVRCIXPNEKKEAGKYNEQLVLEQLRYLGMNEIVRIRRDGYPVHLPTPMFQARYRCLLPH 316
++RC+ N +K GK + LVL QL+ G+ E +RI R+GYP L F RY L+ +
Sbjct: 651 FIRCVVSNYEKLPGKIDAPLVLAQLKCNGVLEGIRICREGYPSRLSHSEFIERYSLLMKN 710
Query: 315 PRPS 304
S
Sbjct: 711 KEQS 714
>U52517-1|AAA97927.1| 846|Caenorhabditis elegans hum-3 protein.
Length = 846
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = -3
Query: 495 YVRCIXPNEKKEAGKYNEQLVLEQLRYLGMNEIVRIRRDGYPVHLPTPMFQARYRCLLP 319
+VRC+ PN + +A ++ +L QL+ GM ++R+ ++G+P A Y+ LP
Sbjct: 465 FVRCVKPNSQMKAWHFDGSAILGQLQCAGMASVLRLMQEGFPSRTSFADLYAMYKKNLP 523
>AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective
spermatogenesis protein15 protein.
Length = 1219
Score = 41.5 bits (93), Expect = 4e-04
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = -3
Query: 495 YVRCIXPNEKKEAGKYNEQLVLEQLRYLGMNEIVRIRRDGYPVHLPTPMFQARYRCLLP 319
+VRC+ PN + +A ++ +L QL+ GM ++R+ ++G+P A Y LP
Sbjct: 668 FVRCVKPNSQMKAWHFDGSAILGQLQCAGMASVLRLMQEGFPSRTSFADLYAMYEKNLP 726
>AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform a protein.
Length = 1219
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = -3
Query: 495 YVRCIXPNEKKEAGKYNEQLVLEQLRYLGMNEIVRIRRDGYPVHLPTPMFQARYRCLLP 319
+VRCI PN + +++ +L QL+ GM ++++ +DG+P A Y+ LP
Sbjct: 685 FVRCIKPNNQMIPFEFDGSAILSQLQCAGMTSVLKLMQDGFPSRTGFGDLYACYQKKLP 743
>AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform b protein.
Length = 1144
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = -3
Query: 495 YVRCIXPNEKKEAGKYNEQLVLEQLRYLGMNEIVRIRRDGYPVHLPTPMFQARYRCLLP 319
+VRCI PN + +++ +L QL+ GM ++++ +DG+P A Y+ LP
Sbjct: 685 FVRCIKPNNQMIPFEFDGSAILSQLQCAGMTSVLKLMQDGFPSRTGFGDLYACYQKKLP 743
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 25.4 bits (53), Expect(2) = 2.6
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 360 PTPMFQARYRCLLPHPRP 307
PTPM Q R C P P P
Sbjct: 31 PTPMCQPRMPCAAPMPMP 48
Score = 21.8 bits (44), Expect(2) = 2.6
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 321 PHPRPSCP 298
P PRPSCP
Sbjct: 87 PMPRPSCP 94
>U28928-1|AAA68334.3| 589|Caenorhabditis elegans Anchor cell fusion
failure protein1 protein.
Length = 589
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = -3
Query: 390 IRRDGYPVHLPTPMFQARYRCLLPHPRPSCPDI 292
++ DG + LP+ + QA++ C+LP +P+ +I
Sbjct: 443 LKDDGSRISLPSTINQAQWVCILPDEQPTKSEI 475
>EF205023-1|ABP04049.1| 589|Caenorhabditis elegans anchor cell
fusion failure-1 protein.
Length = 589
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = -3
Query: 390 IRRDGYPVHLPTPMFQARYRCLLPHPRPSCPDI 292
++ DG + LP+ + QA++ C+LP +P+ +I
Sbjct: 443 LKDDGSRISLPSTINQAQWVCILPDEQPTKSEI 475
>Z68493-7|CAA92793.1| 339|Caenorhabditis elegans Hypothetical
protein C33A12.10 protein.
Length = 339
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +1
Query: 379 VPPDPHYLVHAQVPELFQHELLVVFTGLLLFIRXYATDIPKGHNYFN 519
+PP+ HYL V L+ + L + F LL IR PK H+ N
Sbjct: 108 IPPN-HYLKIILVSALYFNYLAMSFPFLLPVIRLIIVICPKSHSKIN 153
>AL117206-1|CAB60446.1| 644|Caenorhabditis elegans Hypothetical
protein Y67A10A.1 protein.
Length = 644
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 446 LYLPASFFSLGFMQRTYLKAIIILI 520
L++P FF L F++ YLK +LI
Sbjct: 148 LFVPIIFFGLQFLKNDYLKLATVLI 172
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -3
Query: 372 PVHLPTPMFQARYRCLLPHPRPSCPDI 292
PV +PTP++Q Y + P P P+ +
Sbjct: 173 PVPVPTPVYQPTYCAVPPCPAPAATPV 199
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,795,252
Number of Sequences: 27780
Number of extensions: 286162
Number of successful extensions: 851
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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