Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS333G08f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    25   0.62 
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   2.5  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   7.7  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 24.6 bits (51), Expect = 0.62
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -3

Query: 99  LINAS*NIYSFCYITKMLNNNYSDRQEIKIMLS 1
           ++N + NI+    +  +L    SDRQ  +I+LS
Sbjct: 261 ILNRTNNIFELVTVEPILTERPSDRQRNEILLS 293


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +1

Query: 13  FYFLTVTIVIVEHFCYITKRI 75
           F+F   ++++V   CY T  +
Sbjct: 150 FFFAATSLLVVAEVCYFTAHV 170


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -3

Query: 387 VEKLASICLFLGDIGSLVCNHKSSRLFGL 301
           V+K   I L    IGS+VC+   + +F L
Sbjct: 149 VDKRGKIMLSFAWIGSVVCSLPQTIVFHL 177


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,140
Number of Sequences: 438
Number of extensions: 3657
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)