Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS333G07f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1488 + 37716986-37717076,37717424-37717558,37717755-377178...    30   1.3  
06_01_0878 + 6735266-6735340,6735946-6736041,6738610-6738720,673...    28   4.0  
05_01_0128 + 866817-866859,867789-867874,868142-868231,868337-87...    27   6.9  
11_06_0341 - 22507098-22507982,22508616-22508783,22518740-225188...    27   9.1  
10_08_0422 - 17796916-17797167,17797328-17797453,17797546-177977...    27   9.1  

>01_06_1488 +
           37716986-37717076,37717424-37717558,37717755-37717831,
           37717934-37718181,37718503-37718559,37718665-37718800,
           37718944-37719001,37719110-37719195,37719270-37719326,
           37719537-37719557,37720553-37720954,37721500-37721647,
           37721940-37722036,37724065-37724202,37724496-37724598,
           37724792-37724828,37724905-37725014,37725141-37725164
          Length = 674

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 249 WTFCEYCTCIIVSGNVLNQVRGVNERLYKTY 157
           W F   C  +++S  +LN+V G+ E   KTY
Sbjct: 156 WMFFWSCYVLLLSSMILNKVDGLQEMFEKTY 186


>06_01_0878 +
           6735266-6735340,6735946-6736041,6738610-6738720,
           6738816-6739309,6739422-6739587,6739666-6739789,
           6739874-6739986,6740085-6740693,6743095-6743385,
           6743845-6743913,6744099-6744188,6744281-6744696,
           6744882-6744969
          Length = 913

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 15/53 (28%), Positives = 25/53 (47%)
 Frame = -3

Query: 309 FHNVCLSVCATRFYVCAEYEWTFCEYCTCIIVSGNVLNQVRGVNERLYKTYRK 151
           FH  CL+       +    E   C  C C I   +VLN+++GV   ++ ++ K
Sbjct: 342 FHQYCLNPPLLAEDIPQGDEGWLCPACDCKIDCIDVLNELQGVKLSIHDSWEK 394


>05_01_0128 +
           866817-866859,867789-867874,868142-868231,868337-870214,
           870606-870795,870888-871483
          Length = 960

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 511 KVVSQTQYSLARAQQSFKCLVQIHEKNGWFT 419
           K+ S+T Y+    Q++  C V I  K+GW T
Sbjct: 491 KISSETNYNHDNVQKAPACPVGISSKDGWKT 521


>11_06_0341 -
           22507098-22507982,22508616-22508783,22518740-22518893,
           22519396-22519728,22521106-22521374
          Length = 602

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +1

Query: 232 ILAKRPFIFSTYIKTSRAYRQTNVMEMLTRSQLS 333
           I+A+ P +FS     S A +   VME+LT++ ++
Sbjct: 467 IIAQLPVLFSLAFSVSAASQDHGVMEILTKNTMN 500


>10_08_0422 -
           17796916-17797167,17797328-17797453,17797546-17797700,
           17797793-17797907,17798022-17798118,17798274-17798368,
           17798500-17798585,17798689-17798819,17798909-17799090
          Length = 412

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -1

Query: 416 SERGWVIGTAERCVTICYAQRNYHVNMSDS 327
           S  GW IG A     I  A RN HV ++DS
Sbjct: 233 SVTGWRIGWACAPANIASAIRNIHVKLTDS 262


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,744,970
Number of Sequences: 37544
Number of extensions: 236272
Number of successful extensions: 463
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 463
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)