Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS333G07f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-7|CAB02096.2|  387|Caenorhabditis elegans Hypothetical pr...    54   5e-08
AF537093-1|AAO85552.1|  387|Caenorhabditis elegans ubiquitin con...    54   5e-08
Z47811-4|CAD57701.1|  422|Caenorhabditis elegans Hypothetical pr...    31   0.38 
Z81573-2|CAB04626.1|  294|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z34799-1|CAA84315.1|  147|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U80023-3|AAG24039.1|  324|Caenorhabditis elegans Serpentine rece...    28   4.7  
AF068708-2|AAC17753.1|  464|Caenorhabditis elegans Hypothetical ...    28   4.7  
Z71181-9|CAD44140.1|  960|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z71179-1|CAA94888.1|  224|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z71178-18|CAH04640.1|  671|Caenorhabditis elegans Hypothetical p...    27   6.2  
Z71178-17|CAD44089.1|  898|Caenorhabditis elegans Hypothetical p...    27   6.2  
Z71178-15|CAD44087.1|  960|Caenorhabditis elegans Hypothetical p...    27   6.2  
Z71178-14|CAA94886.3|  894|Caenorhabditis elegans Hypothetical p...    27   6.2  
AL021478-4|CAJ26240.1|  671|Caenorhabditis elegans Hypothetical ...    27   6.2  
AL021478-3|CAF32233.1|  898|Caenorhabditis elegans Hypothetical ...    27   6.2  
AL021478-1|CAC35857.2|  894|Caenorhabditis elegans Hypothetical ...    27   6.2  
AF003135-9|AAK18985.3| 1146|Caenorhabditis elegans Guanylyl cycl...    27   6.2  
Z69361-1|CAE17943.1|  468|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>Z79754-7|CAB02096.2|  387|Caenorhabditis elegans Hypothetical
           protein F25H2.8 protein.
          Length = 387

 Score = 54.4 bits (125), Expect = 5e-08
 Identities = 22/30 (73%), Positives = 26/30 (86%)
 Frame = -2

Query: 490 YSLARAQQSFKCLVQIHEKNGWFTPPKEDG 401
           YS+ARAQQSFK L QIH K+GW+TPPK +G
Sbjct: 358 YSMARAQQSFKSLQQIHAKSGWYTPPKTEG 387


>AF537093-1|AAO85552.1|  387|Caenorhabditis elegans ubiquitin
           conjugating enzyme UBC-25 protein.
          Length = 387

 Score = 54.4 bits (125), Expect = 5e-08
 Identities = 22/30 (73%), Positives = 26/30 (86%)
 Frame = -2

Query: 490 YSLARAQQSFKCLVQIHEKNGWFTPPKEDG 401
           YS+ARAQQSFK L QIH K+GW+TPPK +G
Sbjct: 358 YSMARAQQSFKSLQQIHAKSGWYTPPKTEG 387


>Z47811-4|CAD57701.1|  422|Caenorhabditis elegans Hypothetical
           protein K02C4.5 protein.
          Length = 422

 Score = 31.5 bits (68), Expect = 0.38
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = -3

Query: 498 RLSTVWPVHSRASNVLFRYMRKMAGSHLR--KRMGNWNCGAL 379
           RLS +  VHSR +N L +YM      HL   K    ++CGA+
Sbjct: 45  RLSEIAKVHSRTANNLKKYMDPKKNEHLNLWKMCNVYSCGAV 86


>Z81573-2|CAB04626.1|  294|Caenorhabditis elegans Hypothetical
           protein M02G9.3 protein.
          Length = 294

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -1

Query: 521 QCHQSCFTDSVQSGPCTAELQMSCS 447
           QC+Q C + ++ SGP  +  Q +CS
Sbjct: 76  QCNQQCTSITISSGPSCSSCQSACS 100


>Z34799-1|CAA84315.1|  147|Caenorhabditis elegans Hypothetical
           protein F34D10.3 protein.
          Length = 147

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = -1

Query: 299 FVCLYARLVFMYVLNMNGRFASIVRVLL*VVMF*IKCGALTKDYTR 162
           FVC+  ++VF  ++ +   FA  +  ++  + F I CG +  D TR
Sbjct: 90  FVCITCKVVFEVLIAIRLTFALSIPYIVYFIPFWIFCGIIFVDLTR 135


>U80023-3|AAG24039.1|  324|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 30 protein.
          Length = 324

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -3

Query: 279 TRFYVCAEYEWTFCEYCTCIIVSGNVLNQVRGVNERLYK 163
           T F V   Y W     C+  +  G+V   V+ +N+RL K
Sbjct: 185 TAFLVVVAYIWIRETLCSFAVKMGSVKKDVKNLNKRLVK 223


>AF068708-2|AAC17753.1|  464|Caenorhabditis elegans Hypothetical
           protein C18G1.6 protein.
          Length = 464

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 348 VVTLGVTNRYTALRSSNYPSSFGGVNQPFF 437
           V  L   N Y A+  S Y + F GV++P F
Sbjct: 299 VGALSFGNNYVAMEPSIYDNGFSGVSEPVF 328


>Z71181-9|CAD44140.1|  960|Caenorhabditis elegans Hypothetical
           protein B0024.14b protein.
          Length = 960

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -3

Query: 327 LTARQHFHNVCLSVCATRFYVCAE-YEWTFCEYCTCIIVSGNVL 199
           L A++H H VC S    R +   E ++   C  CTC +  G+VL
Sbjct: 591 LAAQKHEHTVCQSPGTGRLFTDGETWQLAPCVSCTCRV--GHVL 632


>Z71179-1|CAA94888.1|  224|Caenorhabditis elegans Hypothetical
           protein F07D3.3 protein.
          Length = 224

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
 Frame = +3

Query: 210 HLQ*YTYNTRKTSIHIQHIH-KNESRIQTDKRYGN-VDAQSAITHINMVVTLGVTNRY 377
           H+     NT  T I ++    +NE+ I    +Y + VDA++A+  +N  V  G+ N Y
Sbjct: 27  HIDNLICNTYPTPIQLRKSPTRNETSINAFYQYSSFVDARNALRILNGAVVPGMENHY 84


>Z71178-18|CAH04640.1|  671|Caenorhabditis elegans Hypothetical
           protein B0024.14e protein.
          Length = 671

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -3

Query: 327 LTARQHFHNVCLSVCATRFYVCAE-YEWTFCEYCTCIIVSGNVL 199
           L A++H H VC S    R +   E ++   C  CTC +  G+VL
Sbjct: 525 LAAQKHEHTVCQSPGTGRLFTDGETWQLAPCVSCTCRV--GHVL 566


>Z71178-17|CAD44089.1|  898|Caenorhabditis elegans Hypothetical
           protein B0024.14d protein.
          Length = 898

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -3

Query: 327 LTARQHFHNVCLSVCATRFYVCAE-YEWTFCEYCTCIIVSGNVL 199
           L A++H H VC S    R +   E ++   C  CTC +  G+VL
Sbjct: 525 LAAQKHEHTVCQSPGTGRLFTDGETWQLAPCVSCTCRV--GHVL 566


>Z71178-15|CAD44087.1|  960|Caenorhabditis elegans Hypothetical
           protein B0024.14b protein.
          Length = 960

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -3

Query: 327 LTARQHFHNVCLSVCATRFYVCAE-YEWTFCEYCTCIIVSGNVL 199
           L A++H H VC S    R +   E ++   C  CTC +  G+VL
Sbjct: 591 LAAQKHEHTVCQSPGTGRLFTDGETWQLAPCVSCTCRV--GHVL 632


>Z71178-14|CAA94886.3|  894|Caenorhabditis elegans Hypothetical
           protein B0024.14a protein.
          Length = 894

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -3

Query: 327 LTARQHFHNVCLSVCATRFYVCAE-YEWTFCEYCTCIIVSGNVL 199
           L A++H H VC S    R +   E ++   C  CTC +  G+VL
Sbjct: 525 LAAQKHEHTVCQSPGTGRLFTDGETWQLAPCVSCTCRV--GHVL 566


>AL021478-4|CAJ26240.1|  671|Caenorhabditis elegans Hypothetical
           protein B0024.14e protein.
          Length = 671

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -3

Query: 327 LTARQHFHNVCLSVCATRFYVCAE-YEWTFCEYCTCIIVSGNVL 199
           L A++H H VC S    R +   E ++   C  CTC +  G+VL
Sbjct: 525 LAAQKHEHTVCQSPGTGRLFTDGETWQLAPCVSCTCRV--GHVL 566


>AL021478-3|CAF32233.1|  898|Caenorhabditis elegans Hypothetical
           protein B0024.14d protein.
          Length = 898

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -3

Query: 327 LTARQHFHNVCLSVCATRFYVCAE-YEWTFCEYCTCIIVSGNVL 199
           L A++H H VC S    R +   E ++   C  CTC +  G+VL
Sbjct: 525 LAAQKHEHTVCQSPGTGRLFTDGETWQLAPCVSCTCRV--GHVL 566


>AL021478-1|CAC35857.2|  894|Caenorhabditis elegans Hypothetical
           protein B0024.14a protein.
          Length = 894

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -3

Query: 327 LTARQHFHNVCLSVCATRFYVCAE-YEWTFCEYCTCIIVSGNVL 199
           L A++H H VC S    R +   E ++   C  CTC +  G+VL
Sbjct: 525 LAAQKHEHTVCQSPGTGRLFTDGETWQLAPCVSCTCRV--GHVL 566


>AF003135-9|AAK18985.3| 1146|Caenorhabditis elegans Guanylyl cyclase
           protein 17 protein.
          Length = 1146

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -3

Query: 495 LSTVWPVHSRASNVLFRYMRKMAGSHLRKRMGNWN 391
           L  VWP     ++ LF Y R+   SH+R  +  W+
Sbjct: 548 LRQVWPRDEMVTSHLFHYARRKVTSHVRHFVIFWH 582


>Z69361-1|CAE17943.1|  468|Caenorhabditis elegans Hypothetical
           protein T13H10.2 protein.
          Length = 468

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +3

Query: 171 VFR*RPALDSEH--YHLQ*YTYNTRKTSIHIQHIHKNESR 284
           + R +P  DSE+  YHL+     T  T +H   +HKN ++
Sbjct: 239 MIRHQPRFDSENENYHLKMIKLKTDLTHLHCWLMHKNRAK 278


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,711,042
Number of Sequences: 27780
Number of extensions: 237677
Number of successful extensions: 653
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)