Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS333G03f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0046 - 5255513-5255630,5255715-5255876,5256579-5256733,525... 44 1e-04
10_08_0250 - 16179646-16179759,16180197-16180325,16180519-161806... 42 3e-04
06_01_0098 + 818374-818427,818537-818627,818753-818868,818962-81... 41 7e-04
10_08_1062 + 22626262-22626318,22626404-22626494,22626601-226267... 40 0.001
07_03_1298 - 25592788-25592890,25593126-25593229,25593747-255938... 39 0.003
03_01_0326 + 2535800-2535938,2536891-2536959,2537310-2537375,253... 38 0.005
05_05_0295 - 23912502-23912507,23912631-23912712,23913020-239131... 38 0.006
03_03_0224 + 15580944-15581036,15581630-15581770,15582385-155824... 38 0.006
02_05_0413 + 28773869-28773925,28774045-28774135,28774515-287746... 38 0.006
01_06_1108 + 34574299-34574446,34575000-34575070,34575246-345753... 38 0.006
01_01_1138 - 9019049-9019159,9019525-9019606,9020059-9020177,902... 38 0.006
01_01_0893 + 7043130-7043182,7043309-7043335,7043461-7043560,704... 37 0.009
02_01_0226 + 1476529-1476585,1477207-1477297,1478247-1478362,147... 37 0.011
07_01_0842 + 6840943-6841288,6841800-6841970,6842762-6842832,684... 36 0.015
03_06_0420 + 33794045-33794192,33794831-33794901,33795093-337952... 36 0.015
02_05_0639 - 30552148-30552265,30552362-30552523,30553177-305532... 34 0.080
02_05_0161 + 26384079-26384086,26386173-26386226,26386376-263864... 33 0.11
02_02_0711 - 13180406-13180423,13180483-13180563,13181026-131811... 33 0.11
01_01_0565 - 4159946-4160042,4160140-4160243,4160378-4160533,416... 33 0.11
07_03_0473 - 18525712-18525858,18526049-18526162,18526442-185265... 33 0.14
01_06_0186 + 27294973-27295211,27295610-27296045 33 0.14
05_06_0061 + 25274693-25274794,25274982-25275069,25275186-252752... 32 0.24
01_05_0340 - 21139885-21139978,21140169-21140272,21140379-211405... 32 0.24
10_03_0038 - 7297210-7297248,7297361-7297429,7297524-7297731,729... 30 1.3
01_05_0531 - 22988663-22990282 30 1.3
05_03_0590 - 15884485-15884489,15884702-15884790,15885086-158852... 29 1.7
02_02_0624 - 12323702-12323777,12324219-12324304,12324360-123244... 29 2.3
06_03_1259 - 28800954-28802468 29 3.0
03_06_0475 + 34193951-34194023,34195414-34195486,34195572-341956... 29 3.0
07_01_0926 - 7775536-7775616,7775695-7775787,7775903-7775965,777... 28 4.0
05_06_0080 + 25420371-25420423,25420681-25420780,25421742-254218... 28 4.0
04_04_1345 + 32792879-32794207 28 5.2
11_06_0234 + 21574380-21575197,21576131-21576190,21578320-215800... 27 6.9
04_04_1331 - 32706043-32707248,32707411-32707652,32707737-327085... 27 6.9
01_01_0832 - 6500139-6500333,6500610-6500875,6501494-6501815,650... 27 6.9
12_02_1213 + 27058329-27058370,27058634-27058711,27058807-270589... 27 9.1
06_03_0921 + 25949453-25949986,25950150-25950188,25950380-259504... 27 9.1
>03_02_0046 -
5255513-5255630,5255715-5255876,5256579-5256733,
5256811-5256892,5257790-5257827
Length = 184
Score = 43.6 bits (98), Expect = 1e-04
Identities = 30/100 (30%), Positives = 46/100 (46%)
Frame = +3
Query: 75 LEHFFSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVL 254
L F K + ++ L+G +GKTS+ ++I + D + T+ V GN+ +
Sbjct: 11 LRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGFSED---MIPTVGFNMRKVT-KGNVTI 66
Query: 255 NLWDCGGQEAFMENYFASQRDNIFRNVEVLIYVFDVESRE 374
LWD GGQ F S + R V ++YV D RE
Sbjct: 67 KLWDLGGQPR-----FRSMWERYCRAVSAIVYVVDAADRE 101
>10_08_0250 -
16179646-16179759,16180197-16180325,16180519-16180640,
16181073-16181138,16182202-16182270,16182989-16183157
Length = 222
Score = 41.9 bits (94), Expect = 3e-04
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Frame = +3
Query: 105 KVLLMGKSGSGKTSMR-SIIFANYIARDTRRLGATIDVEHSHVRFL----GNLVLNLWDC 269
K+LL+G SG GK+S+ S + A A + TI V+ ++FL L L +WD
Sbjct: 21 KILLIGDSGVGKSSLLVSFVVAAAAAHLDDDIAPTIGVDFK-IKFLTIGGKKLKLTIWDT 79
Query: 270 GGQEAFMENYFASQRDNIFRNVEVLIYVFDVESRE 374
GQE F + + +R + +I V+DV RE
Sbjct: 80 AGQER-----FRTITSSYYRGAQGIILVYDVTKRE 109
>06_01_0098 +
818374-818427,818537-818627,818753-818868,818962-819087,
819175-819357
Length = 189
Score = 40.7 bits (91), Expect = 7e-04
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 3/141 (2%)
Frame = +3
Query: 87 FSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATID-VEHSHVRFLGNLVLNLW 263
F + KVL++G +GKT++ + + +G ++ VE+ +V F +W
Sbjct: 12 FCTKEMKVLMLGLDAAGKTTILYRLHIGEVLSSIPTIGFNVEKVEYKNVAF------TVW 65
Query: 264 DCGGQEAFMENYFASQRDNIFRNVEVLIYVFDVESRE-MEKDMHYYQSCL-EAILQNSPE 437
D GGQ+ + FRN + LIYV D RE + +Q+ + + ++ NS
Sbjct: 66 DVGGQDKLRPLW-----RQYFRNADALIYVVDSMDRERIGVAKEEFQAIIRDPLMLNSV- 119
Query: 438 ARIFCLVHKMDLVAEEQREEI 500
I L +K DL E+
Sbjct: 120 --ILLLANKQDLKGAMSSSEV 138
>10_08_1062 +
22626262-22626318,22626404-22626494,22626601-22626716,
22627035-22627094,22627204-22627269,22627726-22627914
Length = 192
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/97 (26%), Positives = 46/97 (47%)
Frame = +3
Query: 84 FFSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLW 263
FF + +V+++G +GKT++ + + +G ++ V++ N+V +W
Sbjct: 12 FFGNKEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVE----KVQYK-NVVFTVW 66
Query: 264 DCGGQEAFMENYFASQRDNIFRNVEVLIYVFDVESRE 374
D GGQE + + F N + LIYV D RE
Sbjct: 67 DVGGQEKLRPLW-----RHYFNNTDALIYVVDSLDRE 98
>07_03_1298 -
25592788-25592890,25593126-25593229,25593747-25593808,
25593957-25594065,25594215-25594355,25594707-25594769,
25594974-25595084,25596140-25596457
Length = 336
Score = 38.7 bits (86), Expect = 0.003
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 5/147 (3%)
Frame = +3
Query: 81 HFFSKMKKKVLLMGKSGSGKTSMRSIIFANYIARD---TRRLGATIDVEHSHVRFLGNLV 251
H FSK + V+++G +GKT++ + + Y+ + R+ T+ + + N+
Sbjct: 144 HVFSKAEFHVVILGVHKAGKTTLLEKVKSIYLKEEGLPHDRIVPTVGLNIGRIED-ANVK 202
Query: 252 LNLWDCGGQEAFMENYFASQRDNIFRNVEVLIYVFDVESREMEKDMHYYQSCLEAILQNS 431
L WD GGQ + + + +IYV D + +D +S LE +L +
Sbjct: 203 LVFWDLGGQPGLRTIW-----EKYYEEAHAVIYVIDSAAASSFEDA---KSALEKVLHHE 254
Query: 432 PEARIFCLV--HKMDLVAEEQREEIFR 506
+ L+ +K +L A EE+ R
Sbjct: 255 DLQGVPLLIFANKQELPAAVTEEELAR 281
>03_01_0326 +
2535800-2535938,2536891-2536959,2537310-2537375,
2537979-2538100,2538501-2538629,2540462-2540569
Length = 210
Score = 37.9 bits (84), Expect = 0.005
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Frame = +3
Query: 105 KVLLMGKSGSGKTSMR-SIIFANYIARDTRRLGATIDVEHSHVRFLG----NLVLNLWDC 269
K+LL+G S GK+S+ S + A++I + + TI V+ ++FL L L +WD
Sbjct: 14 KILLIGDSAVGKSSLLVSFVSASHIDDE---IAPTIGVDFK-IKFLTVNGKKLKLTIWDT 69
Query: 270 GGQEAFMENYFASQRDNIFRNVEVLIYVFDVESRE 374
GQE F + +R +I V+DV RE
Sbjct: 70 AGQER-----FRGITSSYYRGAHGIILVYDVTKRE 99
>05_05_0295 -
23912502-23912507,23912631-23912712,23913020-23913138,
23913480-23913599,23913927-23913997,23914525-23914672
Length = 181
Score = 37.5 bits (83), Expect = 0.006
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Frame = +3
Query: 87 FSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATID-VEHSHVRFLGNLVLNLW 263
F+K + ++L++G +GKT++ + I +G ++ VE+ ++ F +W
Sbjct: 13 FAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISF------TVW 66
Query: 264 DCGGQEAFMENYFASQRDNIFRNVEVLIYVFDVESRE 374
D GGQ+ + + F+N + LI+V D RE
Sbjct: 67 DVGGQDKIRPLW-----RHYFQNTQGLIFVVDSNDRE 98
>03_03_0224 +
15580944-15581036,15581630-15581770,15582385-15582493,
15582598-15582659,15583704-15583807,15584058-15584160
Length = 203
Score = 37.5 bits (83), Expect = 0.006
Identities = 35/148 (23%), Positives = 65/148 (43%), Gaps = 5/148 (3%)
Frame = +3
Query: 78 EHFFSKMKKKVLLMGKSGSGKTSMRSIIFANYIARD---TRRLGATIDVEHSHVRFLGNL 248
++ F+K + VL++G +GKT++ I + Y+ + R+ T+ + + N
Sbjct: 10 KYIFNKTEFHVLILGVDKAGKTTLLEKIKSIYLKGEGLTPDRIVPTVGLNIGRIED-ANA 68
Query: 249 VLNLWDCGGQEAFMENYFASQRDNIFRNVEVLIYVFDVESREMEKDMHYYQSCLEAILQN 428
L WD GGQ + + ++ +IYV D + +D +S LE +L++
Sbjct: 69 KLVFWDLGGQVGLRTIW-----EKYYQEAHAIIYVIDAAAASSFEDA---KSALEKVLRH 120
Query: 429 S--PEARIFCLVHKMDLVAEEQREEIFR 506
A + +K DL EE+ R
Sbjct: 121 EDLKGAPLLIFANKQDLPGVITDEELAR 148
>02_05_0413 +
28773869-28773925,28774045-28774135,28774515-28774630,
28775627-28775686,28775767-28775832,28776499-28776693
Length = 194
Score = 37.5 bits (83), Expect = 0.006
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Frame = +3
Query: 84 FFSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATID-VEHSHVRFLGNLVLNL 260
FF + +V+++G +GKT++ + + +G ++ V++ +V F +
Sbjct: 12 FFGTSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVMF------TV 65
Query: 261 WDCGGQEAFMENYFASQRDNIFRNVEVLIYVFDVESRE 374
WD GGQE + + F N + LIYV D RE
Sbjct: 66 WDVGGQEKLRPLW-----RHYFNNTDGLIYVVDSLDRE 98
>01_06_1108 +
34574299-34574446,34575000-34575070,34575246-34575365,
34575471-34575488,34575708-34575826,34576244-34576325,
34576537-34576542
Length = 187
Score = 37.5 bits (83), Expect = 0.006
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Frame = +3
Query: 87 FSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATID-VEHSHVRFLGNLVLNLW 263
F+K + ++L++G +GKT++ + I +G ++ VE+ ++ F +W
Sbjct: 13 FAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISF------TVW 66
Query: 264 DCGGQEAFMENYFASQRDNIFRNVEVLIYVFDVESRE 374
D GGQ+ + + F+N + LI+V D RE
Sbjct: 67 DVGGQDKIRPLW-----RHYFQNTQGLIFVVDSNDRE 98
>01_01_1138 -
9019049-9019159,9019525-9019606,9020059-9020177,
9020977-9021096,9021313-9021383,9021801-9021948
Length = 216
Score = 37.5 bits (83), Expect = 0.006
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Frame = +3
Query: 87 FSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATID-VEHSHVRFLGNLVLNLW 263
FSK + ++L++G +GKT++ + I +G ++ VE+ ++ F +W
Sbjct: 13 FSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISF------TVW 66
Query: 264 DCGGQEAFMENYFASQRDNIFRNVEVLIYVFDVESRE 374
D GGQ+ + + F+N + LI+V D R+
Sbjct: 67 DVGGQDKIRPLW-----RHYFQNTQGLIFVVDSNDRD 98
>01_01_0893 +
7043130-7043182,7043309-7043335,7043461-7043560,
7045110-7045256,7045342-7045422,7045509-7045654,
7046030-7046099
Length = 207
Score = 37.1 bits (82), Expect = 0.009
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Frame = +3
Query: 93 KMKKKVLLMGKSGSGKTS-MRSIIFANYIARDTRRLGATIDVEHSHVRFLGNL-VLNLWD 266
+M KV+++G SG GKTS M + + + +GA D V+ L L +WD
Sbjct: 6 RMLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGA--DFLTKEVQIDDRLFTLQIWD 63
Query: 267 CGGQEAFMENYFASQRDNIFRNVEVLIYVFDVESREMEKDMHYYQSCLEAILQNSP 434
GQE F A +R + + V+DV + + ++ ++ E ++Q SP
Sbjct: 64 TAGQERFQSLGVA-----FYRGADCCVLVYDVNVTKSFERLNSWRE--EFLIQASP 112
>02_01_0226 +
1476529-1476585,1477207-1477297,1478247-1478362,
1478834-1478893,1479000-1479065,1479847-1480047
Length = 196
Score = 36.7 bits (81), Expect = 0.011
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 2/133 (1%)
Frame = +3
Query: 84 FFSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLW 263
FFS + +V+++G +GKT++ + + +G ++ V++ N+V +W
Sbjct: 12 FFSTREMRVVMLGLDAAGKTTILYRLHMGEVLSTVPTVGFNVE----KVQYK-NVVFTVW 66
Query: 264 DCGGQEAFMENYFASQRDNIFRNVEVLIYVFDVESREMEKDMHY-YQSCL-EAILQNSPE 437
D GGQE + N + LIYV D RE D +Q+ + + ++ NS
Sbjct: 67 DVGGQEKLRPLW-----KMYLSNSDALIYVVDSLDRERIIDARQEFQTIIKDPLMANS-- 119
Query: 438 ARIFCLVHKMDLV 476
I +K DL+
Sbjct: 120 -IILVFANKQDLL 131
>07_01_0842 +
6840943-6841288,6841800-6841970,6842762-6842832,
6843068-6843187,6843654-6843772,6844045-6844126,
6844254-6844259
Length = 304
Score = 36.3 bits (80), Expect = 0.015
Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Frame = +3
Query: 87 FSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATID-VEHSHVRFLGNLVLNLW 263
F+K + ++L++G +GKT++ + I +G ++ VE+ ++ F +W
Sbjct: 136 FAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISF------TVW 189
Query: 264 DCGGQEAFMENYFASQRDNIFRNVEVLIYVFDVESRE 374
D GGQ+ + + F+N + LI+V D R+
Sbjct: 190 DVGGQDKIRPLW-----RHYFQNTQGLIFVVDSNDRD 221
>03_06_0420 +
33794045-33794192,33794831-33794901,33795093-33795212,
33795466-33795584,33795775-33795856,33795984-33795989
Length = 181
Score = 36.3 bits (80), Expect = 0.015
Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Frame = +3
Query: 87 FSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATID-VEHSHVRFLGNLVLNLW 263
F+K + ++L++G +GKT++ + I +G ++ VE+ ++ F +W
Sbjct: 13 FAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISF------TVW 66
Query: 264 DCGGQEAFMENYFASQRDNIFRNVEVLIYVFDVESRE 374
D GGQ+ + + F+N + LI+V D R+
Sbjct: 67 DVGGQDKIRPLW-----RHYFQNTQGLIFVVDSNDRD 98
>02_05_0639 -
30552148-30552265,30552362-30552523,30553177-30553298,
30553515-30553596,30554407-30554699
Length = 258
Score = 33.9 bits (74), Expect = 0.080
Identities = 24/96 (25%), Positives = 41/96 (42%)
Frame = +3
Query: 87 FSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWD 266
F K + ++ L+G +GKTS+ + + + R + GN+ + LWD
Sbjct: 100 FFKQEMELSLVGLQNAGKTSLVNAVAVGFNMRKVTK---------------GNVTIKLWD 144
Query: 267 CGGQEAFMENYFASQRDNIFRNVEVLIYVFDVESRE 374
GGQ F + + R V ++YV D R+
Sbjct: 145 LGGQRRFRTMW-----ERYCRGVSAILYVVDAADRD 175
>02_05_0161 +
26384079-26384086,26386173-26386226,26386376-26386448,
26386775-26386822,26386906-26386953,26387990-26388061,
26388156-26388311,26388428-26388531,26388628-26388724
Length = 219
Score = 33.5 bits (73), Expect = 0.11
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Frame = +3
Query: 105 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLV-LNLWDCGGQE 281
K+LL+G SG GK+ + + FA+ D+ +D + V G + L +WD GQE
Sbjct: 26 KLLLIGDSGVGKSCLL-LRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQE 84
Query: 282 AFMENYFASQRDNIFRNVEVLIYVFDVESRE 374
F + + +R +I V+DV +E
Sbjct: 85 R-----FRTITSSYYRGAHGIIIVYDVTDQE 110
>02_02_0711 -
13180406-13180423,13180483-13180563,13181026-13181188,
13182096-13182206,13182365-13182429
Length = 145
Score = 33.5 bits (73), Expect = 0.11
Identities = 23/85 (27%), Positives = 44/85 (51%)
Frame = +3
Query: 105 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQEA 284
++L++G SGKT++ ++ N DT + T+ +++ LN+WD GGQ+
Sbjct: 18 RILMVGLDNSGKTTI--VLKIN--GEDTGVISPTLGFNIKTIKY-HKYSLNIWDIGGQKT 72
Query: 285 FMENYFASQRDNIFRNVEVLIYVFD 359
+ +Y+ N F + L++V D
Sbjct: 73 -IRSYWR----NYFEQTDGLVWVVD 92
>01_01_0565 -
4159946-4160042,4160140-4160243,4160378-4160533,
4160629-4160700,4161796-4161843,4161923-4161970,
4162295-4162367,4163188-4163201
Length = 203
Score = 33.5 bits (73), Expect = 0.11
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Frame = +3
Query: 105 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLV-LNLWDCGGQE 281
K+LL+G SG GK+ + + FA+ D+ +D + V G + L +WD GQE
Sbjct: 10 KLLLIGDSGVGKSCLL-LRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQE 68
Query: 282 AFMENYFASQRDNIFRNVEVLIYVFDVESRE 374
F + + +R +I V+DV +E
Sbjct: 69 R-----FRTITSSYYRGAHGIIIVYDVTDQE 94
>07_03_0473 -
18525712-18525858,18526049-18526162,18526442-18526522,
18526787-18526865,18526902-18526996,18527092-18527170,
18527339-18527450,18527682-18527770,18527868-18527938,
18528846-18528962
Length = 327
Score = 33.1 bits (72), Expect = 0.14
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Frame = +3
Query: 99 KKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEH-SHVRFLGNLV--LNLWDC 269
K K++ +G GKTS II + ATI ++ S +L + L LWD
Sbjct: 9 KYKLVFLGDQSVGKTS---IITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
Query: 270 GGQEAFMENYFASQRDNIFRNVEVLIYVFDVESRE 374
GQE F S + R+ V + VFDV SR+
Sbjct: 66 AGQER-----FRSLIPSYIRDSSVAVIVFDVASRQ 95
>01_06_0186 + 27294973-27295211,27295610-27296045
Length = 224
Score = 33.1 bits (72), Expect = 0.14
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Frame = +3
Query: 105 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHS--HVRFLGNLV-LNLWDCGG 275
KV+L+G SG GK+++ S + + +TR +TI VE + VR LV +WD G
Sbjct: 21 KVVLIGDSGVGKSNLLSRFARDEFSLETR---STIGVEFATKTVRVDDRLVKAQIWDTAG 77
Query: 276 QEAF 287
QE +
Sbjct: 78 QERY 81
>05_06_0061 +
25274693-25274794,25274982-25275069,25275186-25275295,
25275542-25275605,25275713-25275777,25275864-25275929,
25276084-25276199,25276382-25276415
Length = 214
Score = 32.3 bits (70), Expect = 0.24
Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Frame = +3
Query: 105 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLV-LNLWDCGGQE 281
K + +G GKT M +N D + D ++V GN+V L LWD GQE
Sbjct: 9 KCVTVGDGAVGKTCMLICYTSNKFPTDY--IPTVFDNFSANVSVDGNIVNLGLWDTAGQE 66
Query: 282 AFMENYFASQRDNIFRNVEVLIYVFDVESREMEKDMHYYQSCLEAILQNSPEARIFCLVH 461
++ R +R ++ + F + SR +++ + + + + +P I +
Sbjct: 67 D-----YSRLRPLSYRGADIFVLAFSLISRASYENV--LKKWMPELRRFAPNVPIVLVGT 119
Query: 462 KMDL 473
K+DL
Sbjct: 120 KLDL 123
>01_05_0340 -
21139885-21139978,21140169-21140272,21140379-21140534,
21140622-21140693,21140782-21140829,21140923-21140970,
21141807-21141879,21142333-21142346
Length = 202
Score = 32.3 bits (70), Expect = 0.24
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Frame = +3
Query: 105 KVLLMGKSGSGKTSMRSIIFAN--YIARDTRRLGATIDVEHSHVRFLGNLV-LNLWDCGG 275
K+LL+G SG GK+ + + FA+ Y+ +G +D + V G + L +WD G
Sbjct: 10 KLLLIGDSGVGKSCLL-LRFADDSYLESYISTIG--VDFKIRTVEQDGKTIKLQIWDTAG 66
Query: 276 QEAFMENYFASQRDNIFRNVEVLIYVFDVESRE 374
QE F + + +R +I V+DV +E
Sbjct: 67 QER-----FRTITSSYYRGAHGIIVVYDVTDQE 94
>10_03_0038 -
7297210-7297248,7297361-7297429,7297524-7297731,
7297829-7297911,7298859-7298998,7299132-7299183
Length = 196
Score = 29.9 bits (64), Expect = 1.3
Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
Frame = +3
Query: 105 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLG-NLVLNLWDCGGQE 281
K + +G +G GK+ + + F + R+ L ++ V G N L +WD GQE
Sbjct: 10 KFVTIGDAGVGKSCLL-LQFTDKRFREVEDLTTGVEYGACVVAVDGKNTKLQIWDTAGQE 68
Query: 282 AFMENYFASQRDNIFRNVEVLIYVFDVESREMEKDMHYYQSCLEAILQN-SPEARIFCLV 458
A F + +R + V+D+ R E ++ S LE Q+ S I +
Sbjct: 69 A-----FRCITRSYYRGNAACLLVYDITRR--ETFFNHLASWLEDATQHASARMTIILIG 121
Query: 459 HKMDL 473
+K DL
Sbjct: 122 NKCDL 126
>01_05_0531 - 22988663-22990282
Length = 539
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +3
Query: 153 SIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQEAFMENYF 302
S++ + R + SHV F+GN ++N++ C G A +E F
Sbjct: 307 SVLSLLTLGRQVHARAVKSGLSRSHV-FVGNSLMNMYSCSGSTADLEKVF 355
>05_03_0590 -
15884485-15884489,15884702-15884790,15885086-15885251,
15885333-15885393,15886256-15886392,15887936-15888002
Length = 174
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +3
Query: 105 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGN---LVLNLWDCGG 275
K++L+G GKTS+ + + N + D + AT+ + R + + L++WD G
Sbjct: 16 KLVLLGDGRVGKTSL-VLRYVNDVFSDKQE--ATVQASYLTKRLVVEGVPITLSIWDTAG 72
Query: 276 QEAF 287
QE F
Sbjct: 73 QEKF 76
>02_02_0624 -
12323702-12323777,12324219-12324304,12324360-12324425,
12324650-12324762,12324793-12324856,12324950-12325059,
12325473-12325560,12325651-12325749
Length = 233
Score = 29.1 bits (62), Expect = 2.3
Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Frame = +3
Query: 105 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLV-LNLWDCGGQE 281
K + +G GKT M +N D + D ++V GN V L LWD GQE
Sbjct: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDY--VPTVFDNFSANVVVDGNTVNLGLWDTAGQE 65
Query: 282 AFMENYFASQRDNIFRNVEVLIYVFDVESREMEKDMH 392
+ R +R +V + F + S+ +++H
Sbjct: 66 DYNR-----LRPLSYRGADVFLLAFSLISKASYENIH 97
>06_03_1259 - 28800954-28802468
Length = 504
Score = 28.7 bits (61), Expect = 3.0
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +3
Query: 99 KKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFL 239
K+ LL G G+GKTS+ + I AN + D L T +SH+R L
Sbjct: 255 KRGYLLHGPPGTGKTSLVAAI-ANLLEFDVYDLELTTVPTNSHLRRL 300
>03_06_0475 +
34193951-34194023,34195414-34195486,34195572-34195672,
34195912-34196009,34196326-34196388,34196534-34196626,
34196697-34196774
Length = 192
Score = 28.7 bits (61), Expect = 3.0
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 105 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLV-LNLWDCGGQE 281
K+LL+G SG GK+ + + F++ + ID + V G + L +WD GQE
Sbjct: 17 KLLLIGDSGVGKSCLL-LRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQE 75
Query: 282 AFMENYFASQRDNIFRNVE 338
F + N RN+E
Sbjct: 76 RF--RTITTDIRNWIRNIE 92
>07_01_0926 -
7775536-7775616,7775695-7775787,7775903-7775965,
7776326-7776423,7776661-7776761,7776865-7776937,
7778575-7778647
Length = 193
Score = 28.3 bits (60), Expect = 4.0
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 105 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLV-LNLWDCGGQE 281
K+LL+G SG GK+ + + F++ + ID + + G + L +WD GQE
Sbjct: 17 KLLLIGDSGVGKSCLL-LRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 75
Query: 282 AFMENYFASQRDNIFRNVE 338
F + N RN+E
Sbjct: 76 RF--RTITTDIRNWIRNIE 92
>05_06_0080 +
25420371-25420423,25420681-25420780,25421742-25421888,
25421959-25422039,25422147-25422296
Length = 176
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +3
Query: 252 LNLWDCGGQEAFMENYFASQRDNIFRNVEVLIYVFDVESREMEKDMHYYQSCLEAILQNS 431
L +WD GQE F A +R + + V+DV S + +++ ++ E ++Q S
Sbjct: 50 LQIWDTAGQERFQSLGVA-----FYRGADCCVLVYDVNSMKSFDNLNNWRE--EFLIQAS 102
Query: 432 P 434
P
Sbjct: 103 P 103
>04_04_1345 + 32792879-32794207
Length = 442
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +3
Query: 354 FDVESREMEKDMHYYQSCLEAILQNSPEARIFCLVHKM 467
FD++SR + KD+H Y ++A+ ++ + F + +M
Sbjct: 201 FDMDSRGVAKDLHSYSIYMDALAKSGKPWKAFKVFKEM 238
>11_06_0234 +
21574380-21575197,21576131-21576190,21578320-21580053,
21581859-21582006
Length = 919
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 90 SKMKKKVLLMGKSGSGKTSMRSIIFAN 170
SKM K V ++G G GKT++ +F N
Sbjct: 186 SKMLKIVSVLGLGGLGKTTLAKFVFDN 212
>04_04_1331 -
32706043-32707248,32707411-32707652,32707737-32708562,
32708640-32708863,32708946-32709262,32709381-32709443,
32709465-32709640,32710609-32710985,32711416-32711470,
32711614-32711913
Length = 1261
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = +3
Query: 87 FSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFL 239
F K V ++G SGSGK+++ ++I Y + + L +D++ +R+L
Sbjct: 397 FFPAAKTVAVVGGSGSGKSTVVALIERFYDPNEGQVLLDNVDIKTLQLRWL 447
>01_01_0832 - 6500139-6500333,6500610-6500875,6501494-6501815,
6501915-6502156,6502229-6502457,6503020-6503184,
6503279-6503605,6504150-6504191,6504333-6504400,
6504748-6504934,6506249-6506311,6506748-6506790,
6506919-6507019,6507110-6507184,6507359-6507445,
6507593-6507682,6507906-6507992,6508585-6508783,
6509113-6509177,6509502-6509606,6509726-6509871,
6510100-6510224,6510335-6510437,6510482-6510596,
6510734-6510869,6511298-6511387,6511484-6511578,
6511698-6511763,6511868-6511936,6512034-6512147,
6512241-6512448,6512545-6512600,6512818-6513552
Length = 1671
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 93 KMKKKVLLMGKSGSGKTSM 149
K K +L+MG SGSGKTS+
Sbjct: 1405 KEKDHLLVMGPSGSGKTSL 1423
>12_02_1213 +
27058329-27058370,27058634-27058711,27058807-27058974,
27059834-27059882,27060084-27060157,27060692-27060785,
27060924-27061003,27061311-27061322
Length = 198
Score = 27.1 bits (57), Expect = 9.1
Identities = 28/129 (21%), Positives = 52/129 (40%), Gaps = 1/129 (0%)
Frame = +3
Query: 105 KVLLMGKSGSGKTSM-RSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQE 281
K++L+G G+GK+S+ + ++ +GA + V + +WD GQE
Sbjct: 13 KLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVND-ETVKFEIWDTAGQE 71
Query: 282 AFMENYFASQRDNIFRNVEVLIYVFDVESREMEKDMHYYQSCLEAILQNSPEARIFCLVH 461
+ S +R I V+D+ + + L+A Q +P + +
Sbjct: 72 R-----YHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQA--QGNPNTIMALAGN 124
Query: 462 KMDLVAEEQ 488
K D+V Q
Sbjct: 125 KADMVEARQ 133
>06_03_0921 +
25949453-25949986,25950150-25950188,25950380-25950445,
25950526-25950669,25951416-25951612,25952281-25952443,
25952760-25952873,25953304-25953401,25953964-25954042,
25954356-25954514,25954690-25954779,25955790-25955923,
25956513-25956672,25956826-25956909,25957000-25957167,
25957321-25957446,25958088-25958225,25958311-25958414,
25958832-25958895,25959229-25959317,25959393-25959534,
25959937-25960000,25960085-25960152,25960399-25960521,
25960604-25960669,25960857-25960962,25961076-25961167,
25961243-25961344
Length = 1170
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -3
Query: 105 FSSFWKKNVLGQGFKSLFFI 46
FS W+K+++ +GFK+L FI
Sbjct: 164 FSQLWEKDLVYKGFKNLEFI 183
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,741,451
Number of Sequences: 37544
Number of extensions: 282140
Number of successful extensions: 823
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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