Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS333G02f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domai... 30 4.3
AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domai... 30 4.3
AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein pr... 30 4.3
AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein. 30 4.3
Y19210-1|CAB76830.1| 507|Homo sapiens type II hair keratin 5 pr... 29 9.9
X99140-1|CAA67577.1| 507|Homo sapiens type II intermediate fila... 29 9.9
BC057765-1|AAH57765.1| 476|Homo sapiens HtrA serine peptidase 4... 29 9.9
BC053591-1|AAH53591.1| 1165|Homo sapiens DKFZP434B0335 protein p... 29 9.9
BC012529-1|AAH12529.2| 539|Homo sapiens DKFZP434B0335 protein p... 29 9.9
AK075205-1|BAC11470.1| 476|Homo sapiens protein ( Homo sapiens ... 29 9.9
AB037779-1|BAA92596.1| 1123|Homo sapiens KIAA1358 protein protein. 29 9.9
>AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domains
6 protein.
Length = 1229
Score = 30.3 bits (65), Expect = 4.3
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 5/46 (10%)
Frame = -2
Query: 346 PPDEWGPSSNFCMRC-----CTSISPGCSCVVGVTRCEARPACAVG 224
PPD +G + +F C C S++ C C GV+ C G
Sbjct: 451 PPDTFGKNCSFSCSCQNGGTCDSVTGACRCPPGVSGTNCEDGCPKG 496
>AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domains
6 protein.
Length = 1229
Score = 30.3 bits (65), Expect = 4.3
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 5/46 (10%)
Frame = -2
Query: 346 PPDEWGPSSNFCMRC-----CTSISPGCSCVVGVTRCEARPACAVG 224
PPD +G + +F C C S++ C C GV+ C G
Sbjct: 451 PPDTFGKNCSFSCSCQNGGTCDSVTGACRCPPGVSGTNCEDGCPKG 496
>AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein
protein.
Length = 1640
Score = 30.3 bits (65), Expect = 4.3
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 5/46 (10%)
Frame = -2
Query: 346 PPDEWGPSSNFCMRC-----CTSISPGCSCVVGVTRCEARPACAVG 224
PPD +G + +F C C S++ C C GV+ C G
Sbjct: 631 PPDTFGKNCSFSCSCQNGGTCDSVTGACRCPPGVSGTNCEDGCPKG 676
>AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein.
Length = 1246
Score = 30.3 bits (65), Expect = 4.3
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 5/46 (10%)
Frame = -2
Query: 346 PPDEWGPSSNFCMRC-----CTSISPGCSCVVGVTRCEARPACAVG 224
PPD +G + +F C C S++ C C GV+ C G
Sbjct: 468 PPDTFGKNCSFSCSCQNGGTCDSVTGACRCPPGVSGTNCEDGCPKG 513
>Y19210-1|CAB76830.1| 507|Homo sapiens type II hair keratin 5
protein.
Length = 507
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -2
Query: 307 RCCTSISP--GCSCVVGVTRCEARPACAVGVGTPALTGG 197
RCC S +P G SC G+T +R C +G P + G
Sbjct: 31 RCCISAAPYRGVSCYRGLTGFGSRSLCNLGSCGPRIAVG 69
>X99140-1|CAA67577.1| 507|Homo sapiens type II intermediate
filament of hair keratin protein.
Length = 507
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -2
Query: 307 RCCTSISP--GCSCVVGVTRCEARPACAVGVGTPALTGG 197
RCC S +P G SC G+T +R C +G P + G
Sbjct: 31 RCCISAAPYRGVSCYRGLTGFGSRSLCNLGSCGPRIAVG 69
>BC057765-1|AAH57765.1| 476|Homo sapiens HtrA serine peptidase 4
protein.
Length = 476
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -2
Query: 286 PGCSCVVGVTRCEARPACAVGVGTP 212
P C V TRC A P CA+G TP
Sbjct: 38 PSCPAVCQPTRCPALPTCALGT-TP 61
>BC053591-1|AAH53591.1| 1165|Homo sapiens DKFZP434B0335 protein
protein.
Length = 1165
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 449 CYSFWTCAQDGNSFRKDSSTPSSRA 375
CY W A+DG++F + S PS A
Sbjct: 997 CYQVWAVARDGSAFYRGSVYPSQPA 1021
>BC012529-1|AAH12529.2| 539|Homo sapiens DKFZP434B0335 protein
protein.
Length = 539
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 449 CYSFWTCAQDGNSFRKDSSTPSSRA 375
CY W A+DG++F + S PS A
Sbjct: 371 CYQVWAVARDGSAFYRGSVYPSQPA 395
>AK075205-1|BAC11470.1| 476|Homo sapiens protein ( Homo sapiens
cDNA FLJ90724 fis, clone PLACE1009279, highly similar to
Probable serine protease HTRA4 precursor (EC3.4.21.-).
).
Length = 476
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -2
Query: 286 PGCSCVVGVTRCEARPACAVGVGTP 212
P C V TRC A P CA+G TP
Sbjct: 38 PSCPAVCQPTRCPALPTCALGT-TP 61
>AB037779-1|BAA92596.1| 1123|Homo sapiens KIAA1358 protein protein.
Length = 1123
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 449 CYSFWTCAQDGNSFRKDSSTPSSRA 375
CY W A+DG++F + S PS A
Sbjct: 955 CYQVWAVARDGSAFYRGSVYPSQPA 979
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,005,429
Number of Sequences: 237096
Number of extensions: 1265575
Number of successful extensions: 3260
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3260
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -