Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS333F10f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical... 54 6e-08
Z82059-10|CAB04878.2| 589|Caenorhabditis elegans Hypothetical p... 52 2e-07
DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein. 50 1e-06
AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical ... 50 1e-06
Z82059-11|CAC42351.2| 591|Caenorhabditis elegans Hypothetical p... 48 3e-06
Z69902-7|CAA93769.1| 618|Caenorhabditis elegans Hypothetical pr... 48 4e-06
AB023424-1|BAA82800.1| 618|Caenorhabditis elegans kel-1 protein. 48 4e-06
U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AL032663-3|CAA21761.1| 320|Caenorhabditis elegans Hypothetical ... 44 5e-05
Z77660-9|CAB01179.1| 602|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z79759-4|CAB02139.2| 395|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U67737-1|AAC63596.1| 395|Caenorhabditis elegans MEL-26 protein. 42 4e-04
AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein. 38 0.003
AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein. 38 0.003
AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1 suppres... 38 0.003
L14433-2|AAA27978.1| 410|Caenorhabditis elegans Hypothetical pr... 37 0.010
Z68216-4|CAA92463.2| 565|Caenorhabditis elegans Hypothetical pr... 36 0.018
Z66512-2|CAA91323.1| 387|Caenorhabditis elegans Hypothetical pr... 31 0.50
AL132865-13|CAB60609.1| 496|Caenorhabditis elegans Hypothetical... 31 0.50
AC025723-13|AAK29939.1| 286|Caenorhabditis elegans Hypothetical... 30 0.87
U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical pr... 30 1.2
U80839-11|AAB37912.2| 261|Caenorhabditis elegans Hypothetical p... 29 1.5
U56963-6|AAB38123.3| 324|Caenorhabditis elegans Serpentine rece... 29 2.7
U80954-5|AAB38096.1| 822|Caenorhabditis elegans Hypothetical pr... 28 3.5
U80842-9|AAB37945.2| 258|Caenorhabditis elegans Hypothetical pr... 27 8.1
>AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical
protein R12E2.1 protein.
Length = 531
Score = 54.0 bits (124), Expect = 6e-08
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Frame = +1
Query: 1 GLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSAL 174
GL +R L DVTL + + AH++VLS CSPYF MF +M + ++++ L
Sbjct: 48 GLKNRDVLCDVTLICGWKRINAHRVVLSACSPYFLSMFTSQMAECYMREINMEEIEPPTL 107
Query: 175 RDLLQFMYQGEVNVKQEELASFISTAEQLQV 267
L++F Y G + + + + A LQ+
Sbjct: 108 EALIEFCYTGAIAIDDSNVQDILPAACLLQI 138
>Z82059-10|CAB04878.2| 589|Caenorhabditis elegans Hypothetical
protein T27E9.4a protein.
Length = 589
Score = 52.4 bits (120), Expect = 2e-07
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Frame = +1
Query: 4 LLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPI--VFLKDVSHSALR 177
L S+ L DV L E R L AHK++L+ PYF+ MF ++ + + + ++D+++ +
Sbjct: 44 LRSKCQLCDVALLVENRKLSAHKVILAATIPYFRGMFTLDLMEANMKEINIEDMNYETVD 103
Query: 178 DLLQFMYQGEVNVKQEELASFISTAEQLQV 267
LL F Y GE+ + + S + A Q+
Sbjct: 104 ALLSFAYTGELRITTSNVQSIMLGANFFQM 133
>DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein.
Length = 690
Score = 49.6 bits (113), Expect = 1e-06
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Frame = +1
Query: 19 DLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQF 192
+L DV L G +++AH+ +L+ SPYF+ MF M + + L+D+ ++R ++ +
Sbjct: 109 ELCDVELLVAGSVIRAHRYILAAASPYFKAMFTNGMVEMKKLTIELQDIPEESVRIIVDY 168
Query: 193 MYQGEVNVKQEELASFISTAEQLQV 267
+Y ++ + + I TA LQ+
Sbjct: 169 IYTDKIAITMNNVHQLIFTATVLQM 193
>AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical
protein W02G9.2 protein.
Length = 690
Score = 49.6 bits (113), Expect = 1e-06
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Frame = +1
Query: 19 DLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQF 192
+L DV L G +++AH+ +L+ SPYF+ MF M + + L+D+ ++R ++ +
Sbjct: 109 ELCDVELLVAGSVIRAHRYILAAASPYFKAMFTNGMVEMKKLTIELQDIPEESVRIIVDY 168
Query: 193 MYQGEVNVKQEELASFISTAEQLQV 267
+Y ++ + + I TA LQ+
Sbjct: 169 IYTDKIAITMNNVHQLIFTATVLQM 193
>Z82059-11|CAC42351.2| 591|Caenorhabditis elegans Hypothetical
protein T27E9.4b protein.
Length = 591
Score = 48.4 bits (110), Expect = 3e-06
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Frame = +1
Query: 4 LLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPIVFL----KDVSHSA 171
L S+ L DV L E R L AHK++L+ PYF+ MF ++ + + + D+++
Sbjct: 44 LRSKCQLCDVALLVENRKLSAHKVILAATIPYFRGMFTLDLMEANMKEINIEDSDMNYET 103
Query: 172 LRDLLQFMYQGEVNVKQEELASFISTAEQLQV 267
+ LL F Y GE+ + + S + A Q+
Sbjct: 104 VDALLSFAYTGELRITTSNVQSIMLGANFFQM 135
>Z69902-7|CAA93769.1| 618|Caenorhabditis elegans Hypothetical
protein C47D12.7 protein.
Length = 618
Score = 48.0 bits (109), Expect = 4e-06
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +1
Query: 58 LQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 231
+ AH+++LS S YF+ MF + + I+ +K+V L L+ +MY G + + ++ +
Sbjct: 82 IHAHRVILSASSSYFRAMFTGGLRESTQRIIPIKEVDVEVLSQLIDYMYTGRMRIDEQNV 141
Query: 232 ASFISTAEQLQV 267
+ ++TA LQ+
Sbjct: 142 QTILATASLLQL 153
>AB023424-1|BAA82800.1| 618|Caenorhabditis elegans kel-1 protein.
Length = 618
Score = 48.0 bits (109), Expect = 4e-06
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +1
Query: 58 LQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 231
+ AH+++LS S YF+ MF + + I+ +K+V L L+ +MY G + + ++ +
Sbjct: 82 IHAHRVILSASSSYFRAMFTGGLRESTQRIIPIKEVDVEVLSQLIDYMYTGRMRIDEQNV 141
Query: 232 ASFISTAEQLQV 267
+ ++TA LQ+
Sbjct: 142 QTILATASLLQL 153
>U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical
protein C07D10.2a protein.
Length = 390
Score = 45.6 bits (103), Expect = 2e-05
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = +1
Query: 4 LLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMN--PTQHPIVFLKDVSHSALR 177
L G D TL E R L+AHK +L+ SP F M + + Q+ L+D+ + ++
Sbjct: 196 LYRSGKHADFTLVVEERELKAHKAILAARSPVFAAMMEPHTAEAQNSRAILRDIDYEVVQ 255
Query: 178 DLLQFMYQGEVNVKQEELASFISTAEQLQVKGL 276
+L ++Y G ++ AE+ + GL
Sbjct: 256 AILYYIYTGTCTNMGGNALDILAAAERFALPGL 288
>U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical
protein C07D10.2b protein.
Length = 397
Score = 45.6 bits (103), Expect = 2e-05
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = +1
Query: 4 LLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMN--PTQHPIVFLKDVSHSALR 177
L G D TL E R L+AHK +L+ SP F M + + Q+ L+D+ + ++
Sbjct: 203 LYRSGKHADFTLVVEERELKAHKAILAARSPVFAAMMEPHTAEAQNSRAILRDIDYEVVQ 262
Query: 178 DLLQFMYQGEVNVKQEELASFISTAEQLQVKGL 276
+L ++Y G ++ AE+ + GL
Sbjct: 263 AILYYIYTGTCTNMGGNALDILAAAERFALPGL 295
>AL032663-3|CAA21761.1| 320|Caenorhabditis elegans Hypothetical
protein Y75B12B.4 protein.
Length = 320
Score = 44.4 bits (100), Expect = 5e-05
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +1
Query: 22 LVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLK--DVSHSALRDLLQFM 195
L DV L EG+ + K VL+ S +FQ+MF N + +K DV+HS DLL +
Sbjct: 159 LTDVVLVLEGKHVHVGKQVLATSSQFFQKMFYSNFAEKTQAEIKIDDVTHSEFIDLLNVI 218
Query: 196 YQGEVNVKQEELASFISTAEQLQV 267
Y + + ++ + +++ V
Sbjct: 219 YPTHMLINSSNVSHLLKLSDRFAV 242
>Z77660-9|CAB01179.1| 602|Caenorhabditis elegans Hypothetical
protein F38H4.7 protein.
Length = 602
Score = 42.3 bits (95), Expect = 2e-04
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Frame = +1
Query: 58 LQAHKLVLSVCSPYFQEMFK--MNP--TQHPI-VFLKDVSHSALRDLLQFMYQGEVNVKQ 222
+ AHK VLS+ S F MF + P T+ + + L DV SA LL+F+Y EV ++
Sbjct: 204 IPAHKFVLSIGSVVFDAMFNGGLTPKNTEEALEIELPDVEPSAFLALLKFLYSDEVKIEA 263
Query: 223 EELASFISTAEQLQVKGL 276
E + + + TA++ V +
Sbjct: 264 ESVMTTLYTAKKYAVPAM 281
>Z79759-4|CAB02139.2| 395|Caenorhabditis elegans Hypothetical
protein ZK858.4 protein.
Length = 395
Score = 41.5 bits (93), Expect = 4e-04
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Frame = +1
Query: 4 LLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPT---QHPIVFLKDVSHSAL 174
L S+ L D + G++++AHK VL+ SP F M T + ++++ D+ + +
Sbjct: 194 LFSQELLCDFAINVNGKIIRAHKAVLAARSPVFNAMLTHQDTDEAKSSMMYINDMDYDVI 253
Query: 175 RDLLQFMYQGEVNVKQEELASFISTA 252
+++ ++Y G N ++A+ + A
Sbjct: 254 YEMVYYIYCGRCNKDITDMATALLIA 279
>U67737-1|AAC63596.1| 395|Caenorhabditis elegans MEL-26 protein.
Length = 395
Score = 41.5 bits (93), Expect = 4e-04
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Frame = +1
Query: 4 LLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPT---QHPIVFLKDVSHSAL 174
L S+ L D + G++++AHK VL+ SP F M T + ++++ D+ + +
Sbjct: 194 LFSQELLCDFAINVNGKIIRAHKAVLAARSPVFNAMLTHQDTDEAKSSMMYINDMDYDVI 253
Query: 175 RDLLQFMYQGEVNVKQEELASFISTA 252
+++ ++Y G N ++A+ + A
Sbjct: 254 YEMVYYIYCGRCNKDITDMATALLIA 279
>AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/84 (22%), Positives = 35/84 (41%)
Frame = +1
Query: 16 GDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFM 195
G DV + + + AH+ +L+ SPYF +FK + + S L +M
Sbjct: 39 GRFCDVEIVVQNKSFAAHRNILAAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYM 98
Query: 196 YQGEVNVKQEELASFISTAEQLQV 267
Y G V + + ++ + A +
Sbjct: 99 YSGTVIIDRSSVSELLRFANNFLI 122
>AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/84 (22%), Positives = 35/84 (41%)
Frame = +1
Query: 16 GDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFM 195
G DV + + + AH+ +L+ SPYF +FK + + S L +M
Sbjct: 39 GRFCDVEIVVQNKSFAAHRNILAAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYM 98
Query: 196 YQGEVNVKQEELASFISTAEQLQV 267
Y G V + + ++ + A +
Sbjct: 99 YSGTVIIDRSSVSELLRFANNFLI 122
>AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1
suppressor/dio uptake defective/raf enhancer protein 1
protein.
Length = 909
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/84 (22%), Positives = 35/84 (41%)
Frame = +1
Query: 16 GDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFM 195
G DV + + + AH+ +L+ SPYF +FK + + S L +M
Sbjct: 39 GRFCDVEIVVQNKSFAAHRNILAAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYM 98
Query: 196 YQGEVNVKQEELASFISTAEQLQV 267
Y G V + + ++ + A +
Sbjct: 99 YSGTVIIDRSSVSELLRFANNFLI 122
>L14433-2|AAA27978.1| 410|Caenorhabditis elegans Hypothetical
protein C50C3.8 protein.
Length = 410
Score = 36.7 bits (81), Expect = 0.010
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Frame = +1
Query: 28 DVTLAAEGRLLQAHKLVLSVCSPYFQEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMY 198
D + + ++AH+ +L SP F+ MF M Q + ++D + ++R +++FMY
Sbjct: 220 DCVIHVGNKHIKAHRCILGQNSPVFKSMFSSPNMIEAQKGEIHIEDAKYDSVRAMVEFMY 279
Query: 199 QG--EVNVKQEELASFISTAEQLQV 267
G E Q + ++ A++ +V
Sbjct: 280 TGATESLESQGNIDEILAIADKYEV 304
>Z68216-4|CAA92463.2| 565|Caenorhabditis elegans Hypothetical
protein F27C8.5 protein.
Length = 565
Score = 35.9 bits (79), Expect = 0.018
Identities = 18/80 (22%), Positives = 36/80 (45%)
Frame = +1
Query: 28 DVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGE 207
DV + + H +V+ S F E F + + D ++R + +MY GE
Sbjct: 36 DVKIQLKTGFDMVHSVVICAHSDVFSETFDNQRAPYQPFNMTDFDPDSVRRVFDWMYSGE 95
Query: 208 VNVKQEELASFISTAEQLQV 267
+++ + +A ++ A L+V
Sbjct: 96 IDIPETTIADVLAVASYLRV 115
>Z66512-2|CAA91323.1| 387|Caenorhabditis elegans Hypothetical
protein F52H3.3 protein.
Length = 387
Score = 31.1 bits (67), Expect = 0.50
Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +1
Query: 19 DLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMN--PTQHPIVFLKDVSHSALRDLLQF 192
++ D+TL + L +K L++ SP F MF N + V L+DV R+LL
Sbjct: 226 NICDMTLVINKQKLFVNKAYLALYSPVFYAMFFSNFQEREKTQVELEDVVLEEFRELLHV 285
Query: 193 MYQGEVNVKQEELASFISTAEQLQVK 270
+Y + + + + ++ +++
Sbjct: 286 IYPCHKPITSDNVEYLLELGDKYEIQ 311
>AL132865-13|CAB60609.1| 496|Caenorhabditis elegans Hypothetical
protein Y62E10A.16 protein.
Length = 496
Score = 31.1 bits (67), Expect = 0.50
Identities = 23/103 (22%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Frame = +1
Query: 4 LLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMF-----KMNPTQHPI-VFLKDVSH 165
L +G+ D+ LAA GR + HKL L + +F+ MF + N + + + ++
Sbjct: 63 LFLQGENSDIVLAACGREWRVHKLYLKQ-TKFFESMFDGLWTESNSGRVQMEITDPNIDA 121
Query: 166 SALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGLTGNQNE 294
L +L +Y E+ + +++ ++ A + + +T +E
Sbjct: 122 DGLNSVLGSLYHNEIEIDLDKIEGTVAAASYIVLDSVTDRCSE 164
>AC025723-13|AAK29939.1| 286|Caenorhabditis elegans Hypothetical
protein Y54F10AM.11 protein.
Length = 286
Score = 30.3 bits (65), Expect = 0.87
Identities = 20/80 (25%), Positives = 34/80 (42%)
Frame = +1
Query: 28 DVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGE 207
D + E R K L+ S FQ +F P P + ++DVS L+FMY
Sbjct: 15 DAIVVVEERKFHVGKQYLATHSRVFQSLFA-TPGD-PEITIQDVSSEDFLKFLEFMYHNT 72
Query: 208 VNVKQEELASFISTAEQLQV 267
+ + + S ++ + + V
Sbjct: 73 DQITAQNVESLLTVSARFGV 92
>U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical
protein C15H9.2 protein.
Length = 265
Score = 29.9 bits (64), Expect = 1.2
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Frame = +1
Query: 19 DLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMF-----KMNPTQHPIVFLKDVSHSALRDL 183
D +V L E H VLS+ S YF+ +F + + PI LK +S + R+L
Sbjct: 123 DSSNVVLKVEDEEFHVHTFVLSMASQYFKVLFNGSFIESSDLTKPIE-LKGISSCSFRNL 181
Query: 184 LQFMY 198
L +Y
Sbjct: 182 LNCIY 186
>U80839-11|AAB37912.2| 261|Caenorhabditis elegans Hypothetical
protein ZC204.3 protein.
Length = 261
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 4 LLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFK 117
+ S + D L E + L +K LS+ S YF E+FK
Sbjct: 103 MFSESEDTDAVLVVEDKRLHVNKEFLSLHSTYFAELFK 140
>U56963-6|AAB38123.3| 324|Caenorhabditis elegans Serpentine
receptor, class v protein31 protein.
Length = 324
Score = 28.7 bits (61), Expect = 2.7
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 364 IVFVVTTWGLASKSALVWMAWNFLHF 287
++F TTWGL +K + M + + HF
Sbjct: 59 MIFYTTTWGLRTKPGIREMLYTYQHF 84
>U80954-5|AAB38096.1| 822|Caenorhabditis elegans Hypothetical
protein T07F8.1 protein.
Length = 822
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 202 GEVNVKQEELASFISTAEQLQVKGLTGNQ 288
G K EE+ +I ++++ +GLTGNQ
Sbjct: 650 GPTKQKLEEVLDYIGCSQKINYQGLTGNQ 678
>U80842-9|AAB37945.2| 258|Caenorhabditis elegans Hypothetical
protein ZC239.6 protein.
Length = 258
Score = 27.1 bits (57), Expect = 8.1
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +1
Query: 49 GRLLQAHKLVLSVCSPYFQ---EMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVK 219
G+ K L+ YF+ E+ ++NPT PI + H +L FM G+V++
Sbjct: 8 GKEFVTSKATLTKFDGYFKNLPEIQQVNPTS-PIFVDRSPKH--FETILNFMRDGDVDLP 64
Query: 220 QEELASFISTA 252
QE L + A
Sbjct: 65 QEYLNQLLREA 75
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.130 0.356
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,980,515
Number of Sequences: 27780
Number of extensions: 165179
Number of successful extensions: 366
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 359
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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