Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS333F09f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1490 + 30497980-30498102,30499034-30500156,30500914-305011...    29   2.3  
07_03_1387 + 26202975-26203274,26203363-26203449,26203541-262036...    27   6.9  
10_01_0085 + 1061962-1062141,1062283-1062431,1062734-1062819,106...    27   9.1  
07_01_0516 - 3850252-3852870                                           27   9.1  
04_04_0844 - 28637393-28638118,28638206-28638283,28638431-286386...    27   9.1  
01_02_0039 - 10490522-10490606,10490674-10490810,10491107-104912...    27   9.1  

>06_03_1490 +
           30497980-30498102,30499034-30500156,30500914-30501132,
           30501228-30501454,30501810-30501884,30502250-30502321,
           30502765-30502863,30502975-30503046,30503131-30503245,
           30503455-30503523,30503625-30503952,30504320-30504437,
           30504522-30505448
          Length = 1188

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 83  DGIHSPSGGPYARLPTRATKKKSFNYKFRSRIPFHHEDLPPS 208
           +GI  PS G +A  PT      S  +  R+ +P  H  +PPS
Sbjct: 465 EGISLPSTGQFAENPTGPAPHPSAGFTSRA-MPGQHHGMPPS 505


>07_03_1387 +
          26202975-26203274,26203363-26203449,26203541-26203648,
          26203708-26203980,26205242-26205355,26205900-26206268
          Length = 416

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 92 GYRRPWTSAMPGAEPRRCLI 33
          G  RPWT+A  G   RRC +
Sbjct: 17 GGHRPWTAASRGVSARRCSV 36


>10_01_0085 +
           1061962-1062141,1062283-1062431,1062734-1062819,
           1062986-1063113,1063213-1063341,1063428-1063495,
           1063575-1063812
          Length = 325

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -3

Query: 240 SDRRSTEQYHSLGGRSS*WNGIRDRNL*LNDFFF 139
           S R S  QY + GG S  W GI  +N     FF+
Sbjct: 243 SSRNSPIQYFTSGGGSKAWRGIFQQNEDKLQFFY 276


>07_01_0516 - 3850252-3852870
          Length = 872

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 428 KQECRDVVKWVAIIFSHRFRR 366
           +  CRD+V W A+I SH   R
Sbjct: 560 RMPCRDLVSWNALITSHLLHR 580


>04_04_0844 -
           28637393-28638118,28638206-28638283,28638431-28638607,
           28639124-28639537
          Length = 464

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 14/46 (30%), Positives = 19/46 (41%)
 Frame = +2

Query: 68  LKSMGDGIHSPSGGPYARLPTRATKKKSFNYKFRSRIPFHHEDLPP 205
           L+ +  G   P+ G     P R  K+  F   FR + P H    PP
Sbjct: 8   LRGLLGGGKKPNSGSGDPKPAREKKRWGFGKSFREKSPAHPPPPPP 53


>01_02_0039 -
           10490522-10490606,10490674-10490810,10491107-10491248,
           10491355-10491419,10491528-10491641,10491846-10492119,
           10492215-10492327,10492405-10492499,10492602-10492662,
           10492774-10493103
          Length = 471

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = -3

Query: 210 SLGGRSS*WNGIRDRNL*LNDFFFVALVGRRAYGPPDGEWIPSPMDFSNARGRATPLP 37
           S+GG    W G++++ L   D F   L  R    P  GE I   +D ++ +G  T +P
Sbjct: 192 SVGGAPPIWQGMKEQQLIEKDVFSFWL-NRDPDAPTGGELIFGGVDPNHYKGSHTYVP 248


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,704,684
Number of Sequences: 37544
Number of extensions: 272804
Number of successful extensions: 659
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)