Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS333F01f
         (347 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032631-9|CAA21575.2|  893|Caenorhabditis elegans Hypothetical ...    27   3.7  
AF016430-11|AAB65375.1|  387|Caenorhabditis elegans Hypothetical...    27   4.9  
AF016442-4|AAB65915.1|  361|Caenorhabditis elegans Serpentine re...    26   6.4  
Z77662-12|CAB01202.2|  338|Caenorhabditis elegans Hypothetical p...    26   8.5  
U64603-4|AAO61442.1|  410|Caenorhabditis elegans Serotonin/octop...    26   8.5  
U64603-3|AAM15552.1|  422|Caenorhabditis elegans Serotonin/octop...    26   8.5  
U64603-2|AAB04582.3|  435|Caenorhabditis elegans Serotonin/octop...    26   8.5  
CU457741-9|CAM36350.2|  252|Caenorhabditis elegans Hypothetical ...    26   8.5  

>AL032631-9|CAA21575.2|  893|Caenorhabditis elegans Hypothetical
           protein Y106G6H.7 protein.
          Length = 893

 Score = 27.1 bits (57), Expect = 3.7
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -3

Query: 153 TASRSRLFRFQNKYVTAPTARTA 85
           TASR +LFRF+N     P A ++
Sbjct: 390 TASRKQLFRFENTACATPNANSS 412


>AF016430-11|AAB65375.1|  387|Caenorhabditis elegans Hypothetical
           protein C05C8.8 protein.
          Length = 387

 Score = 26.6 bits (56), Expect = 4.9
 Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = -3

Query: 219 FXFGQ-IXLSLVAILIFIYEKASTASRSRLFRFQNKYVTAPTARTAVAK*ISY 64
           F FG  I  + +++LI ++++A+ +    L+  +NK    PT     +K + Y
Sbjct: 18  FCFGLGIIFNQISLLINVFKEANHSFSIHLYSHKNKDCVVPTWNRVTSKDVPY 70


>AF016442-4|AAB65915.1|  361|Caenorhabditis elegans Serpentine
           receptor, class n protein1 protein.
          Length = 361

 Score = 26.2 bits (55), Expect = 6.4
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = -2

Query: 340 MMIIVPVQLAFFFRDLSPIHSQILKHXSHSIAFVIHWXPGLSVRPNFXFI 191
           ++I  PV L  F   +S       +   H + FVI   P LSV  +F FI
Sbjct: 265 VVIAFPVFLVAFSFVMSYESDTFAELIKHFVTFVISIYPALSVMLSFIFI 314


>Z77662-12|CAB01202.2|  338|Caenorhabditis elegans Hypothetical
           protein F47B8.9a protein.
          Length = 338

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 11/49 (22%), Positives = 25/49 (51%)
 Frame = -2

Query: 340 MMIIVPVQLAFFFRDLSPIHSQILKHXSHSIAFVIHWXPGLSVRPNFXF 194
           ++ ++ +QL FF+  L P+     K  ++ ++ +  W P ++    F F
Sbjct: 258 ILTLIFIQLPFFYSVLGPLAGLSQKLATYLLSILFVWGPVINTVSIFVF 306


>U64603-4|AAO61442.1|  410|Caenorhabditis elegans
           Serotonin/octopamine receptor familyprotein 7, isoform c
           protein.
          Length = 410

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = -3

Query: 165 EKASTASRSRLFRFQNKYVTAPTARTAVAK 76
           ++ + ++ SRLF+ + KY+  P+A  + AK
Sbjct: 274 KERANSTNSRLFKLERKYLHRPSAFFSAAK 303


>U64603-3|AAM15552.1|  422|Caenorhabditis elegans
           Serotonin/octopamine receptor familyprotein 7, isoform b
           protein.
          Length = 422

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = -3

Query: 165 EKASTASRSRLFRFQNKYVTAPTARTAVAK 76
           ++ + ++ SRLF+ + KY+  P+A  + AK
Sbjct: 274 KERANSTNSRLFKLERKYLHRPSAFFSAAK 303


>U64603-2|AAB04582.3|  435|Caenorhabditis elegans
           Serotonin/octopamine receptor familyprotein 7, isoform a
           protein.
          Length = 435

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = -3

Query: 165 EKASTASRSRLFRFQNKYVTAPTARTAVAK 76
           ++ + ++ SRLF+ + KY+  P+A  + AK
Sbjct: 274 KERANSTNSRLFKLERKYLHRPSAFFSAAK 303


>CU457741-9|CAM36350.2|  252|Caenorhabditis elegans Hypothetical
           protein C42C1.9 protein.
          Length = 252

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = +2

Query: 5   FCGSVYYIVFYLFIMQSK 58
           FC SV+YI+ + FI+++K
Sbjct: 222 FCESVHYIINHTFIIENK 239


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,401,360
Number of Sequences: 27780
Number of extensions: 127997
Number of successful extensions: 281
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 281
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 461821634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)