Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS333E09f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_05_0053 + 8602142-8603581                                           32   0.32 
08_02_0969 - 23126389-23126670,23126764-23126947,23127017-231278...    29   2.3  
01_05_0226 + 19506090-19506187,19506668-19506763,19507780-19507900     29   3.0  
03_02_0829 - 11599665-11600364,11600853-11601076,11601786-116020...    28   4.0  
01_02_0015 + 10191793-10191957,10192085-10192229,10192331-101924...    28   4.0  
04_04_1049 + 30414545-30414596,30414732-30414853,30415121-304151...    27   6.9  
11_04_0234 + 15187065-15188241,15188316-15188494                       27   9.1  
06_01_0775 - 5795329-5795801,5796582-5796720,5796810-5797049,579...    27   9.1  

>10_05_0053 + 8602142-8603581
          Length = 479

 Score = 31.9 bits (69), Expect = 0.32
 Identities = 17/46 (36%), Positives = 27/46 (58%)
 Frame = +3

Query: 219 YVIKVKIF*RRYLAALRIGYLSPVQRPRKSSNDRSTIATPPRFFDL 356
           Y+ + K   RRY+ AL +G++   QR +++S+  S    PPRF  L
Sbjct: 99  YICRRKPPSRRYVGALAVGFVQ--QRRQENSSSSSGAPPPPRFIPL 142


>08_02_0969 -
           23126389-23126670,23126764-23126947,23127017-23127834,
           23127953-23128642
          Length = 657

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 16/45 (35%), Positives = 20/45 (44%)
 Frame = +3

Query: 312 NDRSTIATPPRFFDLT*AAFWPAVSGSSYDTQMPPSPLSSGRRKA 446
           +D   + T P    L   A   A  GS   T  PPSP   GRR++
Sbjct: 537 SDNGGMMTVPNLGTLDPMADADANDGSQMQTPAPPSPAGEGRRRS 581


>01_05_0226 + 19506090-19506187,19506668-19506763,19507780-19507900
          Length = 104

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 394 RMIPKCHPHRCHQEDGRRMFRNA 462
           +M  +CH H  H  DGR + R A
Sbjct: 35  KMKTRCHDHELHDADGRSILRKA 57


>03_02_0829 -
           11599665-11600364,11600853-11601076,11601786-11602000,
           11602300-11602377,11602593-11603907
          Length = 843

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
 Frame = +3

Query: 276 YLSPVQRPRKSSNDRSTIATP-PRFFDLT*AAFWPAVSGSSYDTQMP-PSPLSSGR 437
           +L P + P  SS   ST ATP P           P++S  + D+  P PSPLSSGR
Sbjct: 55  FLEP-EVPTDSSLYTSTSATPEPPTIRQKSRNLSPSISHQASDSFSPVPSPLSSGR 109


>01_02_0015 +
           10191793-10191957,10192085-10192229,10192331-10192419,
           10193009-10193063,10193607-10193692,10194006-10194065
          Length = 199

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -2

Query: 391 DPDTAGQKAAYVKSKNLGGVAIVDLSLDDFRGLCTGDK 278
           D +  G+ A  +     G V  V  ++D+FR LCTGDK
Sbjct: 71  DVEVGGEPAGRIVIGLFGEV--VPKTVDNFRALCTGDK 106


>04_04_1049 +
           30414545-30414596,30414732-30414853,30415121-30415198,
           30415329-30415459,30415644-30417552,30417797-30417836,
           30418194-30418259,30418583-30418734
          Length = 849

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = +3

Query: 384 SGSSYDTQMPPSPLS--SGRRKAYVPKR 461
           SGS+Y +  PP P S  SG   ++VP R
Sbjct: 448 SGSTYSSSSPPEPTSSTSGYTSSWVPPR 475


>11_04_0234 + 15187065-15188241,15188316-15188494
          Length = 451

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -2

Query: 415 GGIWVSYEDPDTAGQKAAYVKSKNLGGVAIVDLSLDD 305
           G +WVS++      +K  +V    L G  +  +S DD
Sbjct: 348 GDLWVSFDSAVVVQEKVEFVAKSQLLGYFLSTISFDD 384


>06_01_0775 -
           5795329-5795801,5796582-5796720,5796810-5797049,
           5797278-5797313,5797421-5797501,5797937-5797994,
           5799440-5799630
          Length = 405

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +3

Query: 372 WPAVSGSSYDTQMPPSPLSSGRRKAYV 452
           WP   G  Y    PPSP ++G R   V
Sbjct: 2   WPGCGGRFYWAPAPPSPSAAGARGVVV 28


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,967,609
Number of Sequences: 37544
Number of extensions: 257236
Number of successful extensions: 713
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 713
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)