Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS333E07f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate dehydrogenase|Sch... 158 4e-40
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 77 1e-15
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 74 1e-14
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 71 1e-13
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 64 2e-11
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 55 6e-09
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 54 2e-08
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 29 0.32
SPBC365.12c |ish1||LEA domain protein|Schizosaccharomyces pombe|... 26 3.0
SPCC4E9.01c |rec11|SPCC550.16c|meiotic cohesin complex subunit R... 26 3.0
SPAC5D6.02c |mug165||sequence orphan|Schizosaccharomyces pombe|c... 25 5.2
SPAC1002.09c |dld1|dldh|dihydrolipoamide dehydrogenase Dld1|Schi... 25 6.8
SPMIT.06 |||mitochondrial DNA binding endonuclease|Schizosacchar... 25 6.8
SPAC20G8.04c |||mitochondrial electron transfer flavoprotein-ubi... 25 9.0
>SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate
dehydrogenase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 158 bits (384), Expect = 4e-40
Identities = 74/174 (42%), Positives = 117/174 (67%), Gaps = 2/174 (1%)
Frame = +1
Query: 1 SRIYIPQSLYEPIKTGLLAERAK-LKIGDP-ADFSVFTAAVIDDKAFARITGYIQRAKKN 174
SR+Y+ + +E L ++ K LK+G P DF+ F VI +F ++ ++ A +
Sbjct: 336 SRLYVSKYAWENGFRDELTKQVKSLKVGAPLTDFANFVGPVIHQASFNKLKKVLESAASD 395
Query: 175 PKNKILGGGEFDNSKGYFVQPTIIETTDPHDKLMTEEIFGPVLTIYVYNDKDIDKTMDLI 354
+ ++L GG+ D+S+G+FV+PT++ + +P + E+FGPVL++YVY D ++D DLI
Sbjct: 396 SEIEVLAGGKADDSEGFFVEPTVLLSKNPKHDIFVNELFGPVLSVYVYEDDNLDAVCDLI 455
Query: 355 GTSTKFALTGAIFAKDQVFLKKAYENLKMTAGNFYINDKSTGSVVGQQPFGGGR 516
T+T + LTG+IFA+D+V ++K + L+ AGNFYINDK TG+VVG+QPFGG R
Sbjct: 456 DTTTPYGLTGSIFAQDRVVVRKLTDRLRNAAGNFYINDKCTGAVVGEQPFGGAR 509
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 77.4 bits (182), Expect = 1e-15
Identities = 43/146 (29%), Positives = 75/146 (51%)
Frame = +1
Query: 1 SRIYIPQSLYEPIKTGLLAERAKLKIGDPADFSVFTAAVIDDKAFARITGYIQRAKKNPK 180
SR+ + +S+ + + GL++E KL IG+ D V V+ F +I YIQ A
Sbjct: 309 SRLIVHESVADEVLGGLVSEANKLIIGNGLDPQVTLGPVVSKTQFEKIVSYIQSAINEGC 368
Query: 181 NKILGGGEFDNSKGYFVQPTIIETTDPHDKLMTEEIFGPVLTIYVYNDKDIDKTMDLIGT 360
++GG KGYF+ PT+ H+K+ EEIFGPVL + ++ ++ ++L
Sbjct: 369 KCVVGGLPRSEQKGYFIPPTVFTNVQTHNKIWREEIFGPVLAVKTFHTN--EEALELAND 426
Query: 361 STKFALTGAIFAKDQVFLKKAYENLK 438
S ++ L +F+ + L+ N++
Sbjct: 427 S-EYGLGSGVFSTNPKTLEFFSNNIE 451
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 73.7 bits (173), Expect = 1e-14
Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 4/177 (2%)
Frame = +1
Query: 1 SRIYIPQSLYEP-IKTGLLAERAKLKIGDPADFSVFTAAVIDDKAFARITGYIQRAKKNP 177
SRIY+ S+Y+ I+ +G P D + V++ + RI YI++ KK
Sbjct: 301 SRIYVQDSVYDKFIELFKKHVIQDYIVGMPFDDNTVVGPVVNKTQYNRIKNYIEQGKKEG 360
Query: 178 KNKILGGGEFDNSKGYFVQPTIIETTDPHDKLMTEEIFGPVLTIYVYNDKD--IDKTMDL 351
+LG +GYF+ PTI + ++ EEIFGPV+ I + +D I+K
Sbjct: 361 AKLVLGDEPLPLKQGYFISPTIFADCSENMTIVKEEIFGPVVAISKFKTEDEAIEK---- 416
Query: 352 IGTSTKFALTGAIFAKDQVFLKKAYE-NLKMTAGNFYINDKSTGSVVGQQPFGGGRM 519
+T + L F KD L++A+ + ++ AG +IN + Q PFGG +M
Sbjct: 417 -ANNTTYGLAAMCFTKD---LERAHRVSDELEAGMVFINSTENSDI--QAPFGGIKM 467
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 70.5 bits (165), Expect = 1e-13
Identities = 48/170 (28%), Positives = 80/170 (47%)
Frame = +1
Query: 1 SRIYIPQSLYEPIKTGLLAERAKLKIGDPADFSVFTAAVIDDKAFARITGYIQRAKKNPK 180
SR+Y+ + +Y+ ++A+ LK+GDP F A + + + RI YI+ +
Sbjct: 308 SRVYVQEDVYDEFIKRMVAKAKTLKVGDPFAEDTFQGAQVSKQQYERIVSYIESGIAHGA 367
Query: 181 NKILGGGEFDNSKGYFVQPTIIETTDPHDKLMTEEIFGPVLTIYVYNDKDIDKTMDLIGT 360
+GG N GYFV+PTI+ + EEIFGPVL + + K I++ + G
Sbjct: 368 KLEIGGKRHGN-LGYFVEPTILSNVTEDMAVGKEEIFGPVLAVIKF--KTIEEAIRR-GN 423
Query: 361 STKFALTGAIFAKDQVFLKKAYENLKMTAGNFYINDKSTGSVVGQQPFGG 510
++ + L + + K L+ AG ++N + Q PFGG
Sbjct: 424 NSTYGLAAGVHTNNITNAIKVSNALE--AGTVWVN--CYNLLHHQIPFGG 469
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 63.7 bits (148), Expect = 2e-11
Identities = 28/110 (25%), Positives = 59/110 (53%)
Frame = +1
Query: 1 SRIYIPQSLYEPIKTGLLAERAKLKIGDPADFSVFTAAVIDDKAFARITGYIQRAKKNPK 180
+R+Y+ +++Y+ + L + +K+GD D S +I +++ +I+ A
Sbjct: 302 NRVYVHKNVYDEFVSKLTEKVKTIKVGDGFDSSSAVGPLISQDGCKKVSKHIEDAVSKGA 361
Query: 181 NKILGGGEFDNSKGYFVQPTIIETTDPHDKLMTEEIFGPVLTIYVYNDKD 330
+GG E +SKGYF +PT++ + +EE FGP+ +++ ++D +
Sbjct: 362 KITVGGKEISSSKGYFFEPTVLSGVTQDMLVASEETFGPLASVFKFDDTE 411
>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 55.2 bits (127), Expect = 6e-09
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 3/172 (1%)
Frame = +1
Query: 4 RIYIPQSLYEPIKTGLLAERAKLKIGDPADFSVFTAAVIDDKAFARITGYIQRAKKNPKN 183
RI +Y+ I T L + +++G V A++ + F + IQ A
Sbjct: 278 RIIALDGVYDTIITKLYNRISTMRLGMYTQNDVDMGAMVSNNRFDHLESLIQDAVSKGAR 337
Query: 184 KILGGGEFDNSK---GYFVQPTIIETTDPHDKLMTEEIFGPVLTIYVYNDKDIDKTMDLI 354
+ GG F + K G + PT++ K+ EE F P+ V+ K + ++ I
Sbjct: 338 LVYGGHRFQHPKYPKGNYFLPTLLVDATNEMKIAQEECFAPI--ALVFRAKSPEHALE-I 394
Query: 355 GTSTKFALTGAIFAKDQVFLKKAYENLKMTAGNFYINDKSTGSVVGQQPFGG 510
T+F L ++F +D+ + +NL+ G +ND ++ Q PFGG
Sbjct: 395 ANGTEFGLGASVFGRDKQLCQYFTDNLE--TGMVAVNDFGAFYLL-QMPFGG 443
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 53.6 bits (123), Expect = 2e-08
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 1/171 (0%)
Frame = +1
Query: 1 SRIYIPQSLYEPIKTGLLAER-AKLKIGDPADFSVFTAAVIDDKAFARITGYIQRAKKNP 177
+RIY+ S+Y+ L+ ER +K K+G D V +I +KA +++ +++ A +
Sbjct: 307 NRIYVHSSVYDAF-VDLVTERVSKFKLGYGLDAGVTHGPLISEKAISKVKQHVEDAVQKG 365
Query: 178 KNKILGGGEFDNSKGYFVQPTIIETTDPHDKLMTEEIFGPVLTIYVYNDKDIDKTMDLIG 357
+ GG N + +PT+I + EE FGPV ++ ++ +D +
Sbjct: 366 GVVVTGGKVASNLGPMYFEPTVIINAKQGMLISEEETFGPVGALFKFDTED---EVVAWA 422
Query: 358 TSTKFALTGAIFAKDQVFLKKAYENLKMTAGNFYINDKSTGSVVGQQPFGG 510
+ L G +F+KD + + E L++ G N V+ PFGG
Sbjct: 423 NDSPVGLAGYLFSKDISRVFRVGEALQV--GMVGCNTGLVSDVL--SPFGG 469
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 29.5 bits (63), Expect = 0.32
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = +2
Query: 5 EYISLSLCMNQLRQDYLQKELN*RLVTLQTFQCSQRLSLMTKLLLGSQDTSKEPRRILRT 184
E +L NQ R LQ+E + +L +T++ QR + L ++ KE RRI
Sbjct: 214 EKTALDDLYNQRRA--LQREYDTQLRAFRTYEREQRAKRQEQFRLERENREKEKRRIAAQ 271
Query: 185 RSWEVVSL 208
R E S+
Sbjct: 272 RKLEEASI 279
>SPBC365.12c |ish1||LEA domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 684
Score = 26.2 bits (55), Expect = 3.0
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 40 KTGLLAERAKLKIGDPADFSVFTAAVIDDKAFARI 144
K L A K+G+ AD++ TA+ + KA +++
Sbjct: 415 KAASLGSTASEKVGEAADYAAETASKVASKAASKV 449
>SPCC4E9.01c |rec11|SPCC550.16c|meiotic cohesin complex subunit
Rec11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 923
Score = 26.2 bits (55), Expect = 3.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 139 RITGYIQRAKKNPKNKILGGGEFDN 213
++ YIQR K N KN++ G E N
Sbjct: 704 QLNAYIQRKKINKKNQLNGNDETQN 728
>SPAC5D6.02c |mug165||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 300
Score = 25.4 bits (53), Expect = 5.2
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +1
Query: 325 KDIDKTMDLIGTSTKFALTGAI--FAKDQVFLKKAYE 429
K+++KT DLI T + F L + F D +K YE
Sbjct: 154 KNLEKTEDLIRTDSHFVLNKELLSFRNDYEHRRKHYE 190
>SPAC1002.09c |dld1|dldh|dihydrolipoamide dehydrogenase
Dld1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 511
Score = 25.0 bits (52), Expect = 6.8
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +1
Query: 76 IGDPADFSVFTAAVIDDKAFARITGYIQRAKKNPKNKILGGG 201
I ++ F ID+K TG + ++ K +LGGG
Sbjct: 185 IATGSEVKPFPGVTIDEKKIVSSTGALSLSEVPKKMTVLGGG 226
>SPMIT.06 |||mitochondrial DNA binding
endonuclease|Schizosaccharomyces pombe|chr
mitochondrial|||Manual
Length = 807
Score = 25.0 bits (52), Expect = 6.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 289 FGPVLTIYVYNDKDIDKTMDLI 354
FGP L+IY YN +D + LI
Sbjct: 682 FGPDLSIYDYNSRDENNKPKLI 703
>SPAC20G8.04c |||mitochondrial electron transfer
flavoprotein-ubiquinone
oxidoreductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 632
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -3
Query: 156 DVSCDPSKSFVINDSRCEH*KVCRV 82
D + K FVIN C H K C +
Sbjct: 585 DEASSYGKRFVINSQNCVHCKTCDI 609
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,074,667
Number of Sequences: 5004
Number of extensions: 38237
Number of successful extensions: 118
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 116
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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