Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS333E07f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   1.4  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   1.4  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   3.3  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   3.3  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   3.3  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    22   4.4  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    22   4.4  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    22   4.4  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    22   4.4  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 241 IIETTDPHDKLMTEEIFGPVLTIYVYNDK 327
           I+ T  PH +L  E I   + T+YV   K
Sbjct: 251 ILLTVRPHLELTFENILSHINTVYVLRTK 279


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 241 IIETTDPHDKLMTEEIFGPVLTIYVYNDK 327
           I+ T  PH +L  E I   + T+YV   K
Sbjct: 251 ILLTVRPHLELTFENILSHINTVYVLRTK 279


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 346 PWFYQYLYH 320
           PW Y Y+YH
Sbjct: 171 PWDYYYIYH 179


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 346 PWFYQYLYH 320
           PW Y Y+YH
Sbjct: 186 PWDYYYIYH 194


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 346 PWFYQYLYH 320
           PW Y Y+YH
Sbjct: 74  PWDYYYIYH 82


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -1

Query: 296 GPKISSVMSLSCGSVVSMMV 237
           G ++SSV+SLS  S+ S ++
Sbjct: 13  GGRLSSVLSLSLTSLASSLI 32


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -1

Query: 296 GPKISSVMSLSCGSVVSMMV 237
           G ++SSV+SLS  S+ S ++
Sbjct: 13  GGRLSSVLSLSLTSLASSLI 32


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -1

Query: 296 GPKISSVMSLSCGSVVSMMV 237
           G ++SSV+SLS  S+ S ++
Sbjct: 13  GGRLSSVLSLSLTSLASSLI 32


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -1

Query: 296 GPKISSVMSLSCGSVVSMMV 237
           G ++SSV+SLS  S+ S ++
Sbjct: 13  GGRLSSVLSLSLTSLASSLI 32


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,352
Number of Sequences: 438
Number of extensions: 2206
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)