Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS333E04f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1282 - 25852113-25852406,25852495-25852668,25852849-258529...    29   1.7  
07_03_1265 + 25304408-25304545,25304895-25305032,25305746-253058...    27   6.9  
09_02_0253 - 6319198-6319240,6319364-6319552,6319650-6319995,632...    27   9.1  
08_01_0538 - 4670159-4670251,4670332-4670393,4670476-4670599,467...    27   9.1  

>08_02_1282 -
           25852113-25852406,25852495-25852668,25852849-25852940,
           25853465-25853587,25853691-25853721,25854295-25854434,
           25854871-25854932,25855027-25855103,25855766-25855868,
           25856146-25856207,25857213-25857374
          Length = 439

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 140 PSECPWGRKPLPP*TSGR 193
           P +C WG KP PP TS +
Sbjct: 340 PIKCSWGNKPTPPGTSSK 357


>07_03_1265 +
           25304408-25304545,25304895-25305032,25305746-25305807,
           25306321-25306423,25306560-25306636,25306915-25306971,
           25307202-25307323,25307551-25307667,25308188-25308273,
           25308387-25308560,25308671-25308940
          Length = 447

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 140 PSECPWGRKPLPP*TS 187
           P +C WG KP PP T+
Sbjct: 356 PIKCSWGNKPTPPGTT 371


>09_02_0253 -
           6319198-6319240,6319364-6319552,6319650-6319995,
           6320811-6320893,6320977-6321074,6321384-6321461,
           6321891-6322000,6322083-6322180,6323199-6323296,
           6323403-6323463,6323688-6323831,6324103-6324206,
           6324634-6324787,6324860-6324879,6324967-6325029,
           6326521-6326632,6326711-6326796,6326872-6326899,
           6327242-6327293,6329034-6329250
          Length = 727

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -2

Query: 277 KYYYLCITIQHL*FCKYTMSGFI 209
           K  YLCITI HL    +T++ FI
Sbjct: 281 KLQYLCITIYHLLIACFTVNYFI 303


>08_01_0538 -
           4670159-4670251,4670332-4670393,4670476-4670599,
           4670797-4670859,4671483-4671533,4671627-4671691,
           4671797-4671935,4672332-4672388,4672729-4672827,
           4673266-4673337,4673426-4673494,4673617-4673762,
           4673881-4674157
          Length = 438

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -1

Query: 446 ARRPFQFKTDYRIRELVSTCSWVVPTLLRFRLL 348
           A RPF  K  + + + V    WVVP  L F+LL
Sbjct: 312 ASRPFGIKYKFHLEDAVDCPEWVVPFHL-FKLL 343


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,564,732
Number of Sequences: 37544
Number of extensions: 266543
Number of successful extensions: 437
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 437
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)