Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS333E04f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   4.4  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   4.4  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   4.4  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   5.8  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    21   7.7  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    21   7.7  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 159 PHGHSDGLRGLKNCN 115
           P  +  GLRGLK+C+
Sbjct: 134 PINNVQGLRGLKSCH 148


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 159 PHGHSDGLRGLKNCN 115
           P  +  GLRGLK+C+
Sbjct: 134 PINNVQGLRGLKSCH 148


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 159 PHGHSDGLRGLKNCN 115
           P  +  GLRGLK+C+
Sbjct: 134 PINNVQGLRGLKSCH 148


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 195 NLPEVYGGKGFRPHGHSD 142
           NL E++ G+G    GH D
Sbjct: 46  NLVEIFDGRGTIFEGHDD 63


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +3

Query: 213 KPDIVYLQN*RCWIVIHK 266
           K +I+Y     CW  I+K
Sbjct: 248 KSEILYKSTLHCWATIYK 265


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +3

Query: 213 KPDIVYLQN*RCWIVIHK 266
           K +I+Y     CW  I+K
Sbjct: 248 KSEILYKSTLHCWATIYK 265


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,407
Number of Sequences: 438
Number of extensions: 3838
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)