Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS333E02f
(521 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 319 9e-90
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 316 1e-88
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 201 4e-54
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 168 3e-44
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 33 0.002
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 25 0.62
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.82
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 1.9
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 2.5
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 22 4.4
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 7.7
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 7.7
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 7.7
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 319 bits (784), Expect = 9e-90
Identities = 152/154 (98%), Positives = 152/154 (98%)
Frame = +2
Query: 32 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 211
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 212 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 391
DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT
Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 120
Query: 392 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVTK 493
GEFEAGISKNGQTREHALLAFTLGVKQLIVGV K
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 154
Score = 28.7 bits (61), Expect = 0.038
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 487 NKMDSTEPPYS 519
NKMDSTEPPYS
Sbjct: 153 NKMDSTEPPYS 163
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 316 bits (775), Expect = 1e-88
Identities = 150/154 (97%), Positives = 151/154 (98%)
Frame = +2
Query: 32 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 211
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 212 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 391
DKLKAERERGITIDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGI 120
Query: 392 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVTK 493
GEFEAGISKNGQTREHALLAFTLGVKQLIVGV K
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 154
Score = 25.4 bits (53), Expect = 0.36
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1
Query: 487 NKMDSTEPPYS 519
NKMD T+PPYS
Sbjct: 153 NKMDMTDPPYS 163
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 201 bits (490), Expect = 4e-54
Identities = 96/97 (98%), Positives = 96/97 (98%)
Frame = +2
Query: 203 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 382
WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 383 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVTK 493
AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGV K
Sbjct: 61 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 97
Score = 28.7 bits (61), Expect = 0.038
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 487 NKMDSTEPPYS 519
NKMDSTEPPYS
Sbjct: 96 NKMDSTEPPYS 106
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 168 bits (408), Expect = 3e-44
Identities = 80/81 (98%), Positives = 80/81 (98%)
Frame = +2
Query: 251 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 430
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 431 REHALLAFTLGVKQLIVGVTK 493
REHALLAFTLGVKQLIVGV K
Sbjct: 61 REHALLAFTLGVKQLIVGVNK 81
Score = 28.7 bits (61), Expect = 0.038
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 487 NKMDSTEPPYS 519
NKMDSTEPPYS
Sbjct: 80 NKMDSTEPPYS 90
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 33.1 bits (72), Expect = 0.002
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +2
Query: 290 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 394
VT +D PGH FI G D VL+VAA G
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDG 229
Score = 25.4 bits (53), Expect = 0.36
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 44 KTHINIVVIGHVDSGKST 97
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 24.6 bits (51), Expect = 0.62
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 7/45 (15%)
Frame = -2
Query: 514 MVVQWNPFCYSYDEL-------FDXEGESEQGMLTGLTVFRDTSF 401
+V W+ Y+YD + FD + +E + GL V+RD F
Sbjct: 156 LVYAWSTIDYTYDSIEARDSAIFDGDFITENNLPLGLEVWRDKVF 200
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.82
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 53 INIVVIGHVDSGKST 97
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 1.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 275 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 376
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 2.5
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 275 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 376
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 21.8 bits (44), Expect = 4.4
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -3
Query: 45 FSLPIFG*SRITNCV 1
FSLPIFG I +C+
Sbjct: 57 FSLPIFGTRWIFSCI 71
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 134 DKRTIEKFEKEAQEMG 181
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 134 DKRTIEKFEKEAQEMG 181
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 134 DKRTIEKFEKEAQEMG 181
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,878
Number of Sequences: 438
Number of extensions: 2682
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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