Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS333D09f
         (359 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0235 - 15209003-15211187,15212242-15212319,15212743-15213527     28   2.5  
08_01_0510 + 4455805-4456637,4457837-4457912                           26   7.7  

>11_04_0235 - 15209003-15211187,15212242-15212319,15212743-15213527
          Length = 1015

 Score = 27.9 bits (59), Expect = 2.5
 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -3

Query: 216 LISELTKTKFI-TMDFHLKTTLLVEALRFIFLEINTRTVGNRKLDDV 79
           L  E+TK KF+ T+D   +T + V  ++ I L   T   GN KL DV
Sbjct: 622 LPKEITKLKFLETLDVR-RTKIKVLPIQVIKLPCLTHLFGNFKLQDV 667


>08_01_0510 + 4455805-4456637,4457837-4457912
          Length = 302

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 15/60 (25%), Positives = 23/60 (38%)
 Frame = +3

Query: 3   IKLYKEEEEFVNYCHPSTRQLDYEQERHQVYDFPLSWYLSLEI*TLMPQLEGLFSNESPL 182
           +K  +   E  N        +  E +RH+ YD    W  S    T+ P+L  L+     L
Sbjct: 110 LKKLRARHEIANQIEALKAHVVEESKRHKRYDLLKPWSSSSATFTIDPRLPALYEEVDKL 169


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,344,954
Number of Sequences: 37544
Number of extensions: 109608
Number of successful extensions: 162
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 162
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 554421256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)