Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS333D08f
(397 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X87373-1|CAA60827.1| 264|Homo sapiens ribosomal protein S3a pro... 186 3e-47
M84711-1|AAA58487.1| 264|Homo sapiens v-fos transformation effe... 186 3e-47
M77234-1|AAA60290.1| 264|Homo sapiens ribosomal protein S3a pro... 186 3e-47
L13802-1|AAA35682.1| 264|Homo sapiens ribosmal protein small su... 186 3e-47
BC071916-1|AAH71916.1| 264|Homo sapiens ribosomal protein S3A p... 186 3e-47
BC070211-1|AAH70211.1| 264|Homo sapiens ribosomal protein S3A p... 186 3e-47
BC066926-1|AAH66926.1| 264|Homo sapiens ribosomal protein S3A p... 186 3e-47
BC030161-1|AAH30161.1| 264|Homo sapiens ribosomal protein S3A p... 186 3e-47
BC019072-1|AAH19072.1| 264|Homo sapiens ribosomal protein S3A p... 186 3e-47
BC017123-1|AAH17123.1| 264|Homo sapiens ribosomal protein S3A p... 186 3e-47
BC009404-1|AAH09404.1| 264|Homo sapiens ribosomal protein S3A p... 186 3e-47
BC009219-1|AAH09219.1| 264|Homo sapiens ribosomal protein S3A p... 186 3e-47
BC006298-1|AAH06298.1| 264|Homo sapiens ribosomal protein S3A p... 186 3e-47
BC004981-1|AAH04981.1| 264|Homo sapiens ribosomal protein S3A p... 186 3e-47
BC001708-1|AAH01708.1| 264|Homo sapiens ribosomal protein S3A p... 186 3e-47
BC000204-1|AAH00204.1| 264|Homo sapiens ribosomal protein S3A p... 186 3e-47
BX784396-2|CAI19414.1| 4387|Homo sapiens vacuolar protein sortin... 28 9.7
BX784395-2|CAI19412.1| 4387|Homo sapiens vacuolar protein sortin... 28 9.7
BX682532-2|CAI23591.1| 4387|Homo sapiens vacuolar protein sortin... 28 9.7
AY289064-8|AAP48056.1| 115|Homo sapiens NADH dehydrogenase subu... 28 9.7
AL162331-1|CAB82724.1| 2270|Homo sapiens hypothetical protein pr... 28 9.7
AL109757-2|CAI22116.1| 4387|Homo sapiens vacuolar protein sortin... 28 9.7
AL031296-2|CAI23164.1| 4387|Homo sapiens vacuolar protein sortin... 28 9.7
AL031276-2|CAI19223.1| 4387|Homo sapiens vacuolar protein sortin... 28 9.7
AJ608775-1|CAE75587.1| 4363|Homo sapiens VPS13D-2A protein protein. 28 9.7
AJ608774-1|CAE75586.1| 4388|Homo sapiens VPS13D-1A protein protein. 28 9.7
>X87373-1|CAA60827.1| 264|Homo sapiens ribosomal protein S3a
protein.
Length = 264
Score = 186 bits (452), Expect = 3e-47
Identities = 91/132 (68%), Positives = 106/132 (80%)
Frame = +1
Query: 1 RPVEGR*KRC*DKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVF 180
R +G K K+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVF
Sbjct: 8 RLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
Query: 181 EVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMXKKWQTLIEAX 360
EVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ M KKWQT+IEA
Sbjct: 68 EVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAH 124
Query: 361 IDVKTTDGYVLR 396
+DVKTTDGY+LR
Sbjct: 125 VDVKTTDGYLLR 136
>M84711-1|AAA58487.1| 264|Homo sapiens v-fos transformation
effector protein protein.
Length = 264
Score = 186 bits (452), Expect = 3e-47
Identities = 91/132 (68%), Positives = 106/132 (80%)
Frame = +1
Query: 1 RPVEGR*KRC*DKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVF 180
R +G K K+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVF
Sbjct: 8 RLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
Query: 181 EVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMXKKWQTLIEAX 360
EVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ M KKWQT+IEA
Sbjct: 68 EVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAH 124
Query: 361 IDVKTTDGYVLR 396
+DVKTTDGY+LR
Sbjct: 125 VDVKTTDGYLLR 136
>M77234-1|AAA60290.1| 264|Homo sapiens ribosomal protein S3a
protein.
Length = 264
Score = 186 bits (452), Expect = 3e-47
Identities = 91/132 (68%), Positives = 106/132 (80%)
Frame = +1
Query: 1 RPVEGR*KRC*DKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVF 180
R +G K K+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVF
Sbjct: 8 RLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
Query: 181 EVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMXKKWQTLIEAX 360
EVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ M KKWQT+IEA
Sbjct: 68 EVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAH 124
Query: 361 IDVKTTDGYVLR 396
+DVKTTDGY+LR
Sbjct: 125 VDVKTTDGYLLR 136
>L13802-1|AAA35682.1| 264|Homo sapiens ribosmal protein small
subunit protein.
Length = 264
Score = 186 bits (452), Expect = 3e-47
Identities = 91/132 (68%), Positives = 106/132 (80%)
Frame = +1
Query: 1 RPVEGR*KRC*DKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVF 180
R +G K K+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVF
Sbjct: 8 RLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
Query: 181 EVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMXKKWQTLIEAX 360
EVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ M KKWQT+IEA
Sbjct: 68 EVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAH 124
Query: 361 IDVKTTDGYVLR 396
+DVKTTDGY+LR
Sbjct: 125 VDVKTTDGYLLR 136
>BC071916-1|AAH71916.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 186 bits (452), Expect = 3e-47
Identities = 91/132 (68%), Positives = 106/132 (80%)
Frame = +1
Query: 1 RPVEGR*KRC*DKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVF 180
R +G K K+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVF
Sbjct: 8 RLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
Query: 181 EVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMXKKWQTLIEAX 360
EVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ M KKWQT+IEA
Sbjct: 68 EVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAH 124
Query: 361 IDVKTTDGYVLR 396
+DVKTTDGY+LR
Sbjct: 125 VDVKTTDGYLLR 136
>BC070211-1|AAH70211.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 186 bits (452), Expect = 3e-47
Identities = 91/132 (68%), Positives = 106/132 (80%)
Frame = +1
Query: 1 RPVEGR*KRC*DKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVF 180
R +G K K+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVF
Sbjct: 8 RLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
Query: 181 EVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMXKKWQTLIEAX 360
EVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ M KKWQT+IEA
Sbjct: 68 EVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAH 124
Query: 361 IDVKTTDGYVLR 396
+DVKTTDGY+LR
Sbjct: 125 VDVKTTDGYLLR 136
>BC066926-1|AAH66926.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 186 bits (452), Expect = 3e-47
Identities = 91/132 (68%), Positives = 106/132 (80%)
Frame = +1
Query: 1 RPVEGR*KRC*DKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVF 180
R +G K K+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVF
Sbjct: 8 RLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
Query: 181 EVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMXKKWQTLIEAX 360
EVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ M KKWQT+IEA
Sbjct: 68 EVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAH 124
Query: 361 IDVKTTDGYVLR 396
+DVKTTDGY+LR
Sbjct: 125 VDVKTTDGYLLR 136
>BC030161-1|AAH30161.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 186 bits (452), Expect = 3e-47
Identities = 91/132 (68%), Positives = 106/132 (80%)
Frame = +1
Query: 1 RPVEGR*KRC*DKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVF 180
R +G K K+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVF
Sbjct: 8 RLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
Query: 181 EVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMXKKWQTLIEAX 360
EVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ M KKWQT+IEA
Sbjct: 68 EVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAH 124
Query: 361 IDVKTTDGYVLR 396
+DVKTTDGY+LR
Sbjct: 125 VDVKTTDGYLLR 136
>BC019072-1|AAH19072.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 186 bits (452), Expect = 3e-47
Identities = 91/132 (68%), Positives = 106/132 (80%)
Frame = +1
Query: 1 RPVEGR*KRC*DKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVF 180
R +G K K+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVF
Sbjct: 8 RLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
Query: 181 EVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMXKKWQTLIEAX 360
EVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ M KKWQT+IEA
Sbjct: 68 EVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAH 124
Query: 361 IDVKTTDGYVLR 396
+DVKTTDGY+LR
Sbjct: 125 VDVKTTDGYLLR 136
>BC017123-1|AAH17123.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 186 bits (452), Expect = 3e-47
Identities = 91/132 (68%), Positives = 106/132 (80%)
Frame = +1
Query: 1 RPVEGR*KRC*DKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVF 180
R +G K K+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVF
Sbjct: 8 RLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
Query: 181 EVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMXKKWQTLIEAX 360
EVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ M KKWQT+IEA
Sbjct: 68 EVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAH 124
Query: 361 IDVKTTDGYVLR 396
+DVKTTDGY+LR
Sbjct: 125 VDVKTTDGYLLR 136
>BC009404-1|AAH09404.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 186 bits (452), Expect = 3e-47
Identities = 91/132 (68%), Positives = 106/132 (80%)
Frame = +1
Query: 1 RPVEGR*KRC*DKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVF 180
R +G K K+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVF
Sbjct: 8 RLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
Query: 181 EVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMXKKWQTLIEAX 360
EVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ M KKWQT+IEA
Sbjct: 68 EVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAH 124
Query: 361 IDVKTTDGYVLR 396
+DVKTTDGY+LR
Sbjct: 125 VDVKTTDGYLLR 136
>BC009219-1|AAH09219.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 186 bits (452), Expect = 3e-47
Identities = 91/132 (68%), Positives = 106/132 (80%)
Frame = +1
Query: 1 RPVEGR*KRC*DKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVF 180
R +G K K+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVF
Sbjct: 8 RLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
Query: 181 EVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMXKKWQTLIEAX 360
EVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ M KKWQT+IEA
Sbjct: 68 EVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAH 124
Query: 361 IDVKTTDGYVLR 396
+DVKTTDGY+LR
Sbjct: 125 VDVKTTDGYLLR 136
>BC006298-1|AAH06298.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 186 bits (452), Expect = 3e-47
Identities = 91/132 (68%), Positives = 106/132 (80%)
Frame = +1
Query: 1 RPVEGR*KRC*DKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVF 180
R +G K K+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVF
Sbjct: 8 RLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
Query: 181 EVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMXKKWQTLIEAX 360
EVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ M KKWQT+IEA
Sbjct: 68 EVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAH 124
Query: 361 IDVKTTDGYVLR 396
+DVKTTDGY+LR
Sbjct: 125 VDVKTTDGYLLR 136
>BC004981-1|AAH04981.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 186 bits (452), Expect = 3e-47
Identities = 91/132 (68%), Positives = 106/132 (80%)
Frame = +1
Query: 1 RPVEGR*KRC*DKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVF 180
R +G K K+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVF
Sbjct: 8 RLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
Query: 181 EVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMXKKWQTLIEAX 360
EVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ M KKWQT+IEA
Sbjct: 68 EVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAH 124
Query: 361 IDVKTTDGYVLR 396
+DVKTTDGY+LR
Sbjct: 125 VDVKTTDGYLLR 136
>BC001708-1|AAH01708.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 186 bits (452), Expect = 3e-47
Identities = 91/132 (68%), Positives = 106/132 (80%)
Frame = +1
Query: 1 RPVEGR*KRC*DKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVF 180
R +G K K+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVF
Sbjct: 8 RLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
Query: 181 EVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMXKKWQTLIEAX 360
EVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ M KKWQT+IEA
Sbjct: 68 EVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAH 124
Query: 361 IDVKTTDGYVLR 396
+DVKTTDGY+LR
Sbjct: 125 VDVKTTDGYLLR 136
>BC000204-1|AAH00204.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 186 bits (452), Expect = 3e-47
Identities = 91/132 (68%), Positives = 106/132 (80%)
Frame = +1
Query: 1 RPVEGR*KRC*DKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVF 180
R +G K K+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVF
Sbjct: 8 RLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
Query: 181 EVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMXKKWQTLIEAX 360
EVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ M KKWQT+IEA
Sbjct: 68 EVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAH 124
Query: 361 IDVKTTDGYVLR 396
+DVKTTDGY+LR
Sbjct: 125 VDVKTTDGYLLR 136
>BX784396-2|CAI19414.1| 4387|Homo sapiens vacuolar protein sorting 13
homolog D (S. cerevisiae) protein.
Length = 4387
Score = 28.3 bits (60), Expect = 9.7
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = -2
Query: 312 IGCEVHAVEV-AEHITSLHIFGD*SEFAERPFRVSVSL*ISQGNFENSSLQSFRSNFRSL 136
+ C VE +I+ L +FG + F +RP+ VSL + G ++Q++ ++F L
Sbjct: 961 VNCMQLGVESNGRYISVLKVFGTNAHFVKRPYDAEVSLTV-HGLLLVDTMQTYGADFDLL 1019
Query: 135 GTVDKR-GADLPLAEHRRSLDIVPI 64
K D+P R S P+
Sbjct: 1020 MASHKNLSFDIPTGSLRDSRAQSPV 1044
>BX784395-2|CAI19412.1| 4387|Homo sapiens vacuolar protein sorting 13
homolog D (S. cerevisiae) protein.
Length = 4387
Score = 28.3 bits (60), Expect = 9.7
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = -2
Query: 312 IGCEVHAVEV-AEHITSLHIFGD*SEFAERPFRVSVSL*ISQGNFENSSLQSFRSNFRSL 136
+ C VE +I+ L +FG + F +RP+ VSL + G ++Q++ ++F L
Sbjct: 961 VNCMQLGVESNGRYISVLKVFGTNAHFVKRPYDAEVSLTV-HGLLLVDTMQTYGADFDLL 1019
Query: 135 GTVDKR-GADLPLAEHRRSLDIVPI 64
K D+P R S P+
Sbjct: 1020 MASHKNLSFDIPTGSLRDSRAQSPV 1044
>BX682532-2|CAI23591.1| 4387|Homo sapiens vacuolar protein sorting 13
homolog D (S. cerevisiae) protein.
Length = 4387
Score = 28.3 bits (60), Expect = 9.7
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = -2
Query: 312 IGCEVHAVEV-AEHITSLHIFGD*SEFAERPFRVSVSL*ISQGNFENSSLQSFRSNFRSL 136
+ C VE +I+ L +FG + F +RP+ VSL + G ++Q++ ++F L
Sbjct: 961 VNCMQLGVESNGRYISVLKVFGTNAHFVKRPYDAEVSLTV-HGLLLVDTMQTYGADFDLL 1019
Query: 135 GTVDKR-GADLPLAEHRRSLDIVPI 64
K D+P R S P+
Sbjct: 1020 MASHKNLSFDIPTGSLRDSRAQSPV 1044
>AY289064-8|AAP48056.1| 115|Homo sapiens NADH dehydrogenase subunit
3 protein.
Length = 115
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 386 YPSVVFTSMXASMRVCHFLXIHLSLSVVRSMPWKLQSTLRP 264
YP+ V SM + FL L ++++ +PW LQ+T P
Sbjct: 45 YPARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLP 85
>AL162331-1|CAB82724.1| 2270|Homo sapiens hypothetical protein
protein.
Length = 2270
Score = 28.3 bits (60), Expect = 9.7
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = -2
Query: 312 IGCEVHAVEV-AEHITSLHIFGD*SEFAERPFRVSVSL*ISQGNFENSSLQSFRSNFRSL 136
+ C VE +I+ L +FG + F +RP+ VSL + G ++Q++ ++F L
Sbjct: 961 VNCMQLGVESNGRYISVLKVFGTNAHFVKRPYDAEVSLTV-HGLLLVDTMQTYGADFDLL 1019
Query: 135 GTVDKR-GADLPLAEHRRSLDIVPI 64
K D+P R S P+
Sbjct: 1020 MASHKNLSFDIPTGSLRDSRAQSPV 1044
>AL109757-2|CAI22116.1| 4387|Homo sapiens vacuolar protein sorting 13
homolog D (S. cerevisiae) protein.
Length = 4387
Score = 28.3 bits (60), Expect = 9.7
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = -2
Query: 312 IGCEVHAVEV-AEHITSLHIFGD*SEFAERPFRVSVSL*ISQGNFENSSLQSFRSNFRSL 136
+ C VE +I+ L +FG + F +RP+ VSL + G ++Q++ ++F L
Sbjct: 961 VNCMQLGVESNGRYISVLKVFGTNAHFVKRPYDAEVSLTV-HGLLLVDTMQTYGADFDLL 1019
Query: 135 GTVDKR-GADLPLAEHRRSLDIVPI 64
K D+P R S P+
Sbjct: 1020 MASHKNLSFDIPTGSLRDSRAQSPV 1044
>AL031296-2|CAI23164.1| 4387|Homo sapiens vacuolar protein sorting 13
homolog D (S. cerevisiae) protein.
Length = 4387
Score = 28.3 bits (60), Expect = 9.7
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = -2
Query: 312 IGCEVHAVEV-AEHITSLHIFGD*SEFAERPFRVSVSL*ISQGNFENSSLQSFRSNFRSL 136
+ C VE +I+ L +FG + F +RP+ VSL + G ++Q++ ++F L
Sbjct: 961 VNCMQLGVESNGRYISVLKVFGTNAHFVKRPYDAEVSLTV-HGLLLVDTMQTYGADFDLL 1019
Query: 135 GTVDKR-GADLPLAEHRRSLDIVPI 64
K D+P R S P+
Sbjct: 1020 MASHKNLSFDIPTGSLRDSRAQSPV 1044
>AL031276-2|CAI19223.1| 4387|Homo sapiens vacuolar protein sorting 13
homolog D (S. cerevisiae) protein.
Length = 4387
Score = 28.3 bits (60), Expect = 9.7
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = -2
Query: 312 IGCEVHAVEV-AEHITSLHIFGD*SEFAERPFRVSVSL*ISQGNFENSSLQSFRSNFRSL 136
+ C VE +I+ L +FG + F +RP+ VSL + G ++Q++ ++F L
Sbjct: 961 VNCMQLGVESNGRYISVLKVFGTNAHFVKRPYDAEVSLTV-HGLLLVDTMQTYGADFDLL 1019
Query: 135 GTVDKR-GADLPLAEHRRSLDIVPI 64
K D+P R S P+
Sbjct: 1020 MASHKNLSFDIPTGSLRDSRAQSPV 1044
>AJ608775-1|CAE75587.1| 4363|Homo sapiens VPS13D-2A protein protein.
Length = 4363
Score = 28.3 bits (60), Expect = 9.7
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = -2
Query: 312 IGCEVHAVEV-AEHITSLHIFGD*SEFAERPFRVSVSL*ISQGNFENSSLQSFRSNFRSL 136
+ C VE +I+ L +FG + F +RP+ VSL + G ++Q++ ++F L
Sbjct: 961 VNCMQLGVESNGRYISVLKVFGTNAHFVKRPYDAEVSLTV-HGLLLVDTMQTYGADFDLL 1019
Query: 135 GTVDKR-GADLPLAEHRRSLDIVPI 64
K D+P R S P+
Sbjct: 1020 MASHKNLSFDIPTGSLRDSRAQSPV 1044
>AJ608774-1|CAE75586.1| 4388|Homo sapiens VPS13D-1A protein protein.
Length = 4388
Score = 28.3 bits (60), Expect = 9.7
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = -2
Query: 312 IGCEVHAVEV-AEHITSLHIFGD*SEFAERPFRVSVSL*ISQGNFENSSLQSFRSNFRSL 136
+ C VE +I+ L +FG + F +RP+ VSL + G ++Q++ ++F L
Sbjct: 961 VNCMQLGVESNGRYISVLKVFGTNAHFVKRPYDAEVSLTV-HGLLLVDTMQTYGADFDLL 1019
Query: 135 GTVDKR-GADLPLAEHRRSLDIVPI 64
K D+P R S P+
Sbjct: 1020 MASHKNLSFDIPTGSLRDSRAQSPV 1044
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,141,772
Number of Sequences: 237096
Number of extensions: 1238982
Number of successful extensions: 6247
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 6130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6214
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2813442310
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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