Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS333D03f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ000004-1|AAY18811.1| 335|Homo sapiens MAGT1 protein. 104 2e-22
BC060842-1|AAH60842.1| 335|Homo sapiens implantation-associated... 104 2e-22
BC041014-1|AAH41014.1| 335|Homo sapiens implantation-associated... 104 2e-22
AY358691-1|AAQ89054.1| 335|Homo sapiens implantation-associated... 104 2e-22
AL356235-1|CAH70524.1| 335|Homo sapiens novel protein protein. 104 2e-22
AL138743-1|CAI39753.1| 335|Homo sapiens novel protein protein. 104 2e-22
AK075394-1|BAC11592.1| 335|Homo sapiens protein ( Homo sapiens ... 104 2e-22
AK027632-1|BAB55249.1| 218|Homo sapiens protein ( Homo sapiens ... 104 2e-22
U42360-1|AAB18376.1| 347|Homo sapiens N33 protein form 2 protein. 104 2e-22
BC010370-1|AAH10370.1| 347|Homo sapiens tumor suppressor candid... 104 2e-22
AK223131-1|BAD96851.1| 335|Homo sapiens implantation-associated... 103 5e-22
U42359-1|AAB18375.1| 348|Homo sapiens N33 protein form 1 protein. 99 1e-20
U42349-1|AAB18374.1| 348|Homo sapiens N33 protein. 99 1e-20
BT020002-1|AAV38805.1| 348|Homo sapiens Putative prostate cance... 99 1e-20
BC126154-1|AAI26155.1| 404|Homo sapiens tubulin tyrosine ligase... 31 3.2
BC126152-1|AAI26153.1| 404|Homo sapiens tubulin tyrosine ligase... 31 3.2
AL390719-7|CAI14322.1| 404|Homo sapiens tubulin tyrosine ligase... 31 3.2
AL390719-6|CAI14321.1| 600|Homo sapiens tubulin tyrosine ligase... 31 3.2
AL162741-23|CAI23266.1| 600|Homo sapiens tubulin tyrosine ligas... 31 3.2
AK124125-1|BAC85781.1| 673|Homo sapiens protein ( Homo sapiens ... 31 3.2
AK093438-1|BAC04164.1| 404|Homo sapiens protein ( Homo sapiens ... 31 3.2
AY393170-1|AAS86103.1| 149|Homo sapiens immunoglobulin heavy ch... 29 9.9
>DQ000004-1|AAY18811.1| 335|Homo sapiens MAGT1 protein.
Length = 335
Score = 104 bits (250), Expect = 2e-22
Identities = 60/132 (45%), Positives = 74/132 (56%), Gaps = 2/132 (1%)
Frame = +1
Query: 1 EFLYNKQLWAVCAVFFCFAMVSGQMWNQIRGPPFFHRT-KTGPV-YINGGSHGQFVLESY 174
EFL+NK WA A+ F AM SGQMWN IRGPP+ H+ TG V YI+G S QFV E++
Sbjct: 211 EFLFNKTGWAFAALCFVLAMTSGQMWNHIRGPPYAHKNPHTGHVNYIHGSSQAQFVAETH 270
Query: 175 IVAILNGAVVVGMILMIEAAGGVKNHDPTRTLAEGKRRRFQSVVGXXXXXXXXXXXXXXX 354
IV + NG V +GM+L+ EAA T + GK R+ V G
Sbjct: 271 IVLLFNGGVTLGMVLLCEAA--------TSDMDIGK-RKIMCVAGIGLVVLFFSWMLSIF 321
Query: 355 RAKTQGYPYSFL 390
R+K GYPYSFL
Sbjct: 322 RSKYHGYPYSFL 333
>BC060842-1|AAH60842.1| 335|Homo sapiens implantation-associated
protein protein.
Length = 335
Score = 104 bits (250), Expect = 2e-22
Identities = 60/132 (45%), Positives = 74/132 (56%), Gaps = 2/132 (1%)
Frame = +1
Query: 1 EFLYNKQLWAVCAVFFCFAMVSGQMWNQIRGPPFFHRT-KTGPV-YINGGSHGQFVLESY 174
EFL+NK WA A+ F AM SGQMWN IRGPP+ H+ TG V YI+G S QFV E++
Sbjct: 211 EFLFNKTGWAFAALCFVLAMTSGQMWNHIRGPPYAHKNPHTGHVNYIHGSSQAQFVAETH 270
Query: 175 IVAILNGAVVVGMILMIEAAGGVKNHDPTRTLAEGKRRRFQSVVGXXXXXXXXXXXXXXX 354
IV + NG V +GM+L+ EAA T + GK R+ V G
Sbjct: 271 IVLLFNGGVTLGMVLLCEAA--------TSDMDIGK-RKIMCVAGIGLVVLFFSWMLSIF 321
Query: 355 RAKTQGYPYSFL 390
R+K GYPYSFL
Sbjct: 322 RSKYHGYPYSFL 333
>BC041014-1|AAH41014.1| 335|Homo sapiens implantation-associated
protein protein.
Length = 335
Score = 104 bits (250), Expect = 2e-22
Identities = 60/132 (45%), Positives = 74/132 (56%), Gaps = 2/132 (1%)
Frame = +1
Query: 1 EFLYNKQLWAVCAVFFCFAMVSGQMWNQIRGPPFFHRT-KTGPV-YINGGSHGQFVLESY 174
EFL+NK WA A+ F AM SGQMWN IRGPP+ H+ TG V YI+G S QFV E++
Sbjct: 211 EFLFNKTGWAFAALCFVLAMTSGQMWNHIRGPPYAHKNPHTGHVNYIHGSSQAQFVAETH 270
Query: 175 IVAILNGAVVVGMILMIEAAGGVKNHDPTRTLAEGKRRRFQSVVGXXXXXXXXXXXXXXX 354
IV + NG V +GM+L+ EAA T + GK R+ V G
Sbjct: 271 IVLLFNGGVTLGMVLLCEAA--------TSDMDIGK-RKIMCVAGIGLVVLFFSWMLSIF 321
Query: 355 RAKTQGYPYSFL 390
R+K GYPYSFL
Sbjct: 322 RSKYHGYPYSFL 333
>AY358691-1|AAQ89054.1| 335|Homo sapiens implantation-associated
protein protein.
Length = 335
Score = 104 bits (250), Expect = 2e-22
Identities = 60/132 (45%), Positives = 74/132 (56%), Gaps = 2/132 (1%)
Frame = +1
Query: 1 EFLYNKQLWAVCAVFFCFAMVSGQMWNQIRGPPFFHRT-KTGPV-YINGGSHGQFVLESY 174
EFL+NK WA A+ F AM SGQMWN IRGPP+ H+ TG V YI+G S QFV E++
Sbjct: 211 EFLFNKTGWAFAALCFVLAMTSGQMWNHIRGPPYAHKNPHTGHVNYIHGSSQAQFVAETH 270
Query: 175 IVAILNGAVVVGMILMIEAAGGVKNHDPTRTLAEGKRRRFQSVVGXXXXXXXXXXXXXXX 354
IV + NG V +GM+L+ EAA T + GK R+ V G
Sbjct: 271 IVLLFNGGVTLGMVLLCEAA--------TSDMDIGK-RKIMCVAGIGLVVLFFSWMLSIF 321
Query: 355 RAKTQGYPYSFL 390
R+K GYPYSFL
Sbjct: 322 RSKYHGYPYSFL 333
>AL356235-1|CAH70524.1| 335|Homo sapiens novel protein protein.
Length = 335
Score = 104 bits (250), Expect = 2e-22
Identities = 60/132 (45%), Positives = 74/132 (56%), Gaps = 2/132 (1%)
Frame = +1
Query: 1 EFLYNKQLWAVCAVFFCFAMVSGQMWNQIRGPPFFHRT-KTGPV-YINGGSHGQFVLESY 174
EFL+NK WA A+ F AM SGQMWN IRGPP+ H+ TG V YI+G S QFV E++
Sbjct: 211 EFLFNKTGWAFAALCFVLAMTSGQMWNHIRGPPYAHKNPHTGHVNYIHGSSQAQFVAETH 270
Query: 175 IVAILNGAVVVGMILMIEAAGGVKNHDPTRTLAEGKRRRFQSVVGXXXXXXXXXXXXXXX 354
IV + NG V +GM+L+ EAA T + GK R+ V G
Sbjct: 271 IVLLFNGGVTLGMVLLCEAA--------TSDMDIGK-RKIMCVAGIGLVVLFFSWMLSIF 321
Query: 355 RAKTQGYPYSFL 390
R+K GYPYSFL
Sbjct: 322 RSKYHGYPYSFL 333
>AL138743-1|CAI39753.1| 335|Homo sapiens novel protein protein.
Length = 335
Score = 104 bits (250), Expect = 2e-22
Identities = 60/132 (45%), Positives = 74/132 (56%), Gaps = 2/132 (1%)
Frame = +1
Query: 1 EFLYNKQLWAVCAVFFCFAMVSGQMWNQIRGPPFFHRT-KTGPV-YINGGSHGQFVLESY 174
EFL+NK WA A+ F AM SGQMWN IRGPP+ H+ TG V YI+G S QFV E++
Sbjct: 211 EFLFNKTGWAFAALCFVLAMTSGQMWNHIRGPPYAHKNPHTGHVNYIHGSSQAQFVAETH 270
Query: 175 IVAILNGAVVVGMILMIEAAGGVKNHDPTRTLAEGKRRRFQSVVGXXXXXXXXXXXXXXX 354
IV + NG V +GM+L+ EAA T + GK R+ V G
Sbjct: 271 IVLLFNGGVTLGMVLLCEAA--------TSDMDIGK-RKIMCVAGIGLVVLFFSWMLSIF 321
Query: 355 RAKTQGYPYSFL 390
R+K GYPYSFL
Sbjct: 322 RSKYHGYPYSFL 333
>AK075394-1|BAC11592.1| 335|Homo sapiens protein ( Homo sapiens
cDNA PSEC0084 fis, clone NT2RP2005970, highly similar to
IMPLANTATION-ASSOCIATED PROTEIN. ).
Length = 335
Score = 104 bits (250), Expect = 2e-22
Identities = 60/132 (45%), Positives = 74/132 (56%), Gaps = 2/132 (1%)
Frame = +1
Query: 1 EFLYNKQLWAVCAVFFCFAMVSGQMWNQIRGPPFFHRT-KTGPV-YINGGSHGQFVLESY 174
EFL+NK WA A+ F AM SGQMWN IRGPP+ H+ TG V YI+G S QFV E++
Sbjct: 211 EFLFNKTGWAFAALCFVLAMTSGQMWNHIRGPPYAHKNPHTGHVNYIHGSSQAQFVAETH 270
Query: 175 IVAILNGAVVVGMILMIEAAGGVKNHDPTRTLAEGKRRRFQSVVGXXXXXXXXXXXXXXX 354
IV + NG V +GM+L+ EAA T + GK R+ V G
Sbjct: 271 IVLLFNGGVTLGMVLLCEAA--------TSDMDIGK-RKIMCVAGIGLVVLFFSWMLSIF 321
Query: 355 RAKTQGYPYSFL 390
R+K GYPYSFL
Sbjct: 322 RSKYHGYPYSFL 333
>AK027632-1|BAB55249.1| 218|Homo sapiens protein ( Homo sapiens
cDNA FLJ14726 fis, clone NT2RP3001727, highly similar to
Rattus norvegicus implantation-associated protein (IAG2)
mRNA. ).
Length = 218
Score = 104 bits (250), Expect = 2e-22
Identities = 60/132 (45%), Positives = 74/132 (56%), Gaps = 2/132 (1%)
Frame = +1
Query: 1 EFLYNKQLWAVCAVFFCFAMVSGQMWNQIRGPPFFHRT-KTGPV-YINGGSHGQFVLESY 174
EFL+NK WA A+ F AM SGQMWN IRGPP+ H+ TG V YI+G S QFV E++
Sbjct: 94 EFLFNKTGWAFAALCFVLAMTSGQMWNHIRGPPYAHKNPHTGHVNYIHGSSQAQFVAETH 153
Query: 175 IVAILNGAVVVGMILMIEAAGGVKNHDPTRTLAEGKRRRFQSVVGXXXXXXXXXXXXXXX 354
IV + NG V +GM+L+ EAA T + GK R+ V G
Sbjct: 154 IVLLFNGGVTLGMVLLCEAA--------TSDMDIGK-RKIMCVAGIGLVVLFFSWMLSIF 204
Query: 355 RAKTQGYPYSFL 390
R+K GYPYSFL
Sbjct: 205 RSKYHGYPYSFL 216
>U42360-1|AAB18376.1| 347|Homo sapiens N33 protein form 2 protein.
Length = 347
Score = 104 bits (249), Expect = 2e-22
Identities = 57/134 (42%), Positives = 76/134 (56%), Gaps = 2/134 (1%)
Frame = +1
Query: 1 EFLYNKQLWAVCAVFFCFAMVSGQMWNQIRGPPFFHRT-KTGPV-YINGGSHGQFVLESY 174
EF+YNK WA+ ++ FAM SGQMWN IRGPP+ H+ G V YI+G S QFV ES+
Sbjct: 223 EFIYNKTGWAMVSLCIVFAMTSGQMWNHIRGPPYAHKNPHNGQVSYIHGSSQAQFVAESH 282
Query: 175 IVAILNGAVVVGMILMIEAAGGVKNHDPTRTLAEGKRRRFQSVVGXXXXXXXXXXXXXXX 354
I+ +LN A+ +GM+L+ EAA + + +RR +VG
Sbjct: 283 IILVLNAAITMGMVLLNEAA---------TSKGDVGKRRIICLVGLGLVVFFFSFLLSIF 333
Query: 355 RAKTQGYPYSFLFK 396
R+K GYPYSFL K
Sbjct: 334 RSKYHGYPYSFLIK 347
>BC010370-1|AAH10370.1| 347|Homo sapiens tumor suppressor candidate
3 protein.
Length = 347
Score = 104 bits (249), Expect = 2e-22
Identities = 57/134 (42%), Positives = 76/134 (56%), Gaps = 2/134 (1%)
Frame = +1
Query: 1 EFLYNKQLWAVCAVFFCFAMVSGQMWNQIRGPPFFHRT-KTGPV-YINGGSHGQFVLESY 174
EF+YNK WA+ ++ FAM SGQMWN IRGPP+ H+ G V YI+G S QFV ES+
Sbjct: 223 EFIYNKTGWAMVSLCIVFAMTSGQMWNHIRGPPYAHKNPHNGQVSYIHGSSQAQFVAESH 282
Query: 175 IVAILNGAVVVGMILMIEAAGGVKNHDPTRTLAEGKRRRFQSVVGXXXXXXXXXXXXXXX 354
I+ +LN A+ +GM+L+ EAA + + +RR +VG
Sbjct: 283 IILVLNAAITMGMVLLNEAA---------TSKGDVGKRRIICLVGLGLVVFFFSFLLSIF 333
Query: 355 RAKTQGYPYSFLFK 396
R+K GYPYSFL K
Sbjct: 334 RSKYHGYPYSFLIK 347
>AK223131-1|BAD96851.1| 335|Homo sapiens implantation-associated
protein variant protein.
Length = 335
Score = 103 bits (246), Expect = 5e-22
Identities = 59/132 (44%), Positives = 73/132 (55%), Gaps = 2/132 (1%)
Frame = +1
Query: 1 EFLYNKQLWAVCAVFFCFAMVSGQMWNQIRGPPFFHRT-KTGPV-YINGGSHGQFVLESY 174
EFL+NK WA A+ F AM SGQMWN IRGPP+ H+ TG V YI+G S QFV E++
Sbjct: 211 EFLFNKTGWAFAALCFVLAMTSGQMWNHIRGPPYAHKNPHTGHVNYIHGSSQAQFVAETH 270
Query: 175 IVAILNGAVVVGMILMIEAAGGVKNHDPTRTLAEGKRRRFQSVVGXXXXXXXXXXXXXXX 354
IV + NG V +GM+L+ EA T + GK R+ V G
Sbjct: 271 IVLLFNGGVTLGMVLLCEAV--------TSDMDIGK-RKIMCVAGIGLVVLFFSWMLSIF 321
Query: 355 RAKTQGYPYSFL 390
R+K GYPYSFL
Sbjct: 322 RSKYHGYPYSFL 333
>U42359-1|AAB18375.1| 348|Homo sapiens N33 protein form 1 protein.
Length = 348
Score = 98.7 bits (235), Expect = 1e-20
Identities = 55/132 (41%), Positives = 74/132 (56%), Gaps = 2/132 (1%)
Frame = +1
Query: 1 EFLYNKQLWAVCAVFFCFAMVSGQMWNQIRGPPFFHRT-KTGPV-YINGGSHGQFVLESY 174
EF+YNK WA+ ++ FAM SGQMWN IRGPP+ H+ G V YI+G S QFV ES+
Sbjct: 223 EFIYNKTGWAMVSLCIVFAMTSGQMWNHIRGPPYAHKNPHNGQVSYIHGSSQAQFVAESH 282
Query: 175 IVAILNGAVVVGMILMIEAAGGVKNHDPTRTLAEGKRRRFQSVVGXXXXXXXXXXXXXXX 354
I+ +LN A+ +GM+L+ EAA + + +RR +VG
Sbjct: 283 IILVLNAAITMGMVLLNEAA---------TSKGDVGKRRIICLVGLGLVVFFFSFLLSIF 333
Query: 355 RAKTQGYPYSFL 390
R+K GYPYS L
Sbjct: 334 RSKYHGYPYSDL 345
>U42349-1|AAB18374.1| 348|Homo sapiens N33 protein.
Length = 348
Score = 98.7 bits (235), Expect = 1e-20
Identities = 55/132 (41%), Positives = 74/132 (56%), Gaps = 2/132 (1%)
Frame = +1
Query: 1 EFLYNKQLWAVCAVFFCFAMVSGQMWNQIRGPPFFHRT-KTGPV-YINGGSHGQFVLESY 174
EF+YNK WA+ ++ FAM SGQMWN IRGPP+ H+ G V YI+G S QFV ES+
Sbjct: 223 EFIYNKTGWAMVSLCIVFAMTSGQMWNHIRGPPYAHKNPHNGQVSYIHGSSQAQFVAESH 282
Query: 175 IVAILNGAVVVGMILMIEAAGGVKNHDPTRTLAEGKRRRFQSVVGXXXXXXXXXXXXXXX 354
I+ +LN A+ +GM+L+ EAA + + +RR +VG
Sbjct: 283 IILVLNAAITMGMVLLNEAA---------TSKGDVGKRRIICLVGLGLVVFFFSFLLSIF 333
Query: 355 RAKTQGYPYSFL 390
R+K GYPYS L
Sbjct: 334 RSKYHGYPYSDL 345
>BT020002-1|AAV38805.1| 348|Homo sapiens Putative prostate cancer
tumor suppressor protein.
Length = 348
Score = 98.7 bits (235), Expect = 1e-20
Identities = 55/132 (41%), Positives = 74/132 (56%), Gaps = 2/132 (1%)
Frame = +1
Query: 1 EFLYNKQLWAVCAVFFCFAMVSGQMWNQIRGPPFFHRT-KTGPV-YINGGSHGQFVLESY 174
EF+YNK WA+ ++ FAM SGQMWN IRGPP+ H+ G V YI+G S QFV ES+
Sbjct: 223 EFIYNKTGWAMVSLCIVFAMTSGQMWNHIRGPPYAHKNPHNGQVSYIHGSSQAQFVAESH 282
Query: 175 IVAILNGAVVVGMILMIEAAGGVKNHDPTRTLAEGKRRRFQSVVGXXXXXXXXXXXXXXX 354
I+ +LN A+ +GM+L+ EAA + + +RR +VG
Sbjct: 283 IILVLNAAITMGMVLLNEAA---------TSKGDVGKRRIICLVGLGLVVFFFSFLLSIF 333
Query: 355 RAKTQGYPYSFL 390
R+K GYPYS L
Sbjct: 334 RSKYHGYPYSDL 345
>BC126154-1|AAI26155.1| 404|Homo sapiens tubulin tyrosine
ligase-like family, member 10 protein.
Length = 404
Score = 30.7 bits (66), Expect = 3.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 91 GPPFFHRTKTGPVYINGGSHGQFVLESY 174
G P H T+ GP + GGS+G ++ SY
Sbjct: 73 GKPSPHSTRPGPFFYIGGSNGATIISSY 100
>BC126152-1|AAI26153.1| 404|Homo sapiens tubulin tyrosine
ligase-like family, member 10 protein.
Length = 404
Score = 30.7 bits (66), Expect = 3.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 91 GPPFFHRTKTGPVYINGGSHGQFVLESY 174
G P H T+ GP + GGS+G ++ SY
Sbjct: 73 GKPSPHSTRPGPFFYIGGSNGATIISSY 100
>AL390719-7|CAI14322.1| 404|Homo sapiens tubulin tyrosine
ligase-like family, member 5 protein.
Length = 404
Score = 30.7 bits (66), Expect = 3.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 91 GPPFFHRTKTGPVYINGGSHGQFVLESY 174
G P H T+ GP + GGS+G ++ SY
Sbjct: 73 GKPSPHSTRPGPFFYIGGSNGATIISSY 100
>AL390719-6|CAI14321.1| 600|Homo sapiens tubulin tyrosine
ligase-like family, member 5 protein.
Length = 600
Score = 30.7 bits (66), Expect = 3.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 91 GPPFFHRTKTGPVYINGGSHGQFVLESY 174
G P H T+ GP + GGS+G ++ SY
Sbjct: 73 GKPSPHSTRPGPFFYIGGSNGATIISSY 100
>AL162741-23|CAI23266.1| 600|Homo sapiens tubulin tyrosine
ligase-like family, member 5 protein.
Length = 600
Score = 30.7 bits (66), Expect = 3.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 91 GPPFFHRTKTGPVYINGGSHGQFVLESY 174
G P H T+ GP + GGS+G ++ SY
Sbjct: 73 GKPSPHSTRPGPFFYIGGSNGATIISSY 100
>AK124125-1|BAC85781.1| 673|Homo sapiens protein ( Homo sapiens
cDNA FLJ42131 fis, clone TESTI2016046, weakly similar
to Homo sapiens HOTTL protein mRNA. ).
Length = 673
Score = 30.7 bits (66), Expect = 3.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 91 GPPFFHRTKTGPVYINGGSHGQFVLESY 174
G P H T+ GP + GGS+G ++ SY
Sbjct: 146 GKPSPHSTRPGPFFYIGGSNGATIISSY 173
>AK093438-1|BAC04164.1| 404|Homo sapiens protein ( Homo sapiens
cDNA FLJ36119 fis, clone TESTI2022652, weakly similar to
TUBULIN--TYROSINE LIGASE (EC 6.3.2.25). ).
Length = 404
Score = 30.7 bits (66), Expect = 3.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 91 GPPFFHRTKTGPVYINGGSHGQFVLESY 174
G P H T+ GP + GGS+G ++ SY
Sbjct: 73 GKPSPHSTRPGPFFYIGGSNGATIISSY 100
>AY393170-1|AAS86103.1| 149|Homo sapiens immunoglobulin heavy chain
protein.
Length = 149
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 34 CAVFFCFAMVSGQMWNQIRGPPFFHRTKTGPVYINGGSHGQFVLESYI 177
C VF F S W IR PP + G +Y +G ++ L+S +
Sbjct: 6 CTVFGAFISSSSYYWGWIRQPPGKNLEWIGNIYYSGSTYYNPSLKSRV 53
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,907,925
Number of Sequences: 237096
Number of extensions: 1807665
Number of successful extensions: 3870
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3840
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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