Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS333D03f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L17337-3|AAA28222.1|  331|Caenorhabditis elegans Hypothetical pr...    76   1e-14
AL033514-5|CAA22082.1|  773|Caenorhabditis elegans Hypothetical ...    27   6.2  
Z83102-10|CAB05469.2|  420|Caenorhabditis elegans Hypothetical p...    27   8.1  
AY037794-1|AAK94759.1|  189|Caenorhabditis elegans GLY-15 protein.     27   8.1  
AL032664-1|CAA21769.2|  420|Caenorhabditis elegans Hypothetical ...    27   8.1  

>L17337-3|AAA28222.1|  331|Caenorhabditis elegans Hypothetical
           protein ZK686.3 protein.
          Length = 331

 Score = 76.2 bits (179), Expect = 1e-14
 Identities = 46/142 (32%), Positives = 67/142 (47%), Gaps = 11/142 (7%)
 Frame = +1

Query: 1   EFLYNKQLWAVCAVFFCFAMVSGQMWNQIRGPPFF--HRTKTGPVYINGGSHGQFVLESY 174
           +FL+N+ +W    +   F  +SGQMWN IRGPPF   +     P +I+G +  Q + E+Y
Sbjct: 191 DFLFNRTVWGFVCLAITFIFMSGQMWNHIRGPPFMITNPNTKEPSFIHGSTQFQLIAETY 250

Query: 175 IVAILNGAVVVGMILMIEAAGGVKNHDPTRTLAEGKRRRFQ---------SVVGXXXXXX 327
           IV +L   + +G I + EAA    + D  R  A  K              ++ G      
Sbjct: 251 IVGLLYALIAIGFICVNEAADQSNSKD--RKNAGKKLNPLSLLNIPTNTLAIAGLVCICV 308

Query: 328 XXXXXXXXXRAKTQGYPYSFLF 393
                    R+K +GYPYSFLF
Sbjct: 309 FFSFLLSVFRSKYRGYPYSFLF 330


>AL033514-5|CAA22082.1|  773|Caenorhabditis elegans Hypothetical
           protein Y75B8A.4 protein.
          Length = 773

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +1

Query: 160 VLESYIVAILNGAVVVGMILMIEAAGGVKNHDPTRTLAEGKRRRFQSV 303
           VLE   V  +N +V  GMIL      G+      + +AE   R+FQ V
Sbjct: 314 VLEHLAVCKMNNSVK-GMILCFTGPPGIGKTSIAKAIAESMGRKFQRV 360


>Z83102-10|CAB05469.2|  420|Caenorhabditis elegans Hypothetical
           protein C54C8.11 protein.
          Length = 420

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/28 (35%), Positives = 20/28 (71%)
 Frame = +3

Query: 414 KRPTSSPIYIFKIYLTSKFNKWKNSFLI 497
           KRP SSP+ ++K  L++ F++   +F++
Sbjct: 236 KRPWSSPLPLYKTSLSATFSRKSANFMV 263


>AY037794-1|AAK94759.1|  189|Caenorhabditis elegans GLY-15 protein.
          Length = 189

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/28 (35%), Positives = 20/28 (71%)
 Frame = +3

Query: 414 KRPTSSPIYIFKIYLTSKFNKWKNSFLI 497
           KRP SSP+ ++K  L++ F++   +F++
Sbjct: 136 KRPWSSPLPLYKTSLSATFSRKSANFMV 163


>AL032664-1|CAA21769.2|  420|Caenorhabditis elegans Hypothetical
           protein C54C8.11 protein.
          Length = 420

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/28 (35%), Positives = 20/28 (71%)
 Frame = +3

Query: 414 KRPTSSPIYIFKIYLTSKFNKWKNSFLI 497
           KRP SSP+ ++K  L++ F++   +F++
Sbjct: 236 KRPWSSPLPLYKTSLSATFSRKSANFMV 263


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,990,667
Number of Sequences: 27780
Number of extensions: 283986
Number of successful extensions: 754
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)