Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS333C11f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011437-1|AAR99095.1| 380|Drosophila melanogaster RE61404p pro... 48 6e-06
BT010094-1|AAQ22563.1| 861|Drosophila melanogaster GH26833p pro... 48 6e-06
BT010074-1|AAQ22543.1| 1064|Drosophila melanogaster LD11117p pro... 48 6e-06
AE014297-3842|AAO41604.1| 826|Drosophila melanogaster CG31092-P... 48 6e-06
AE014297-3841|AAF56498.3| 1069|Drosophila melanogaster CG31092-P... 48 6e-06
BT011063-1|AAR31134.1| 1037|Drosophila melanogaster LD21010p pro... 44 2e-04
BT011057-1|AAR31128.1| 996|Drosophila melanogaster RE40649p pro... 44 2e-04
BT001632-1|AAN71387.1| 739|Drosophila melanogaster RE38584p pro... 44 2e-04
AE014297-3844|AAF56499.2| 883|Drosophila melanogaster CG31094-P... 44 2e-04
AE014297-3843|AAF56500.3| 1031|Drosophila melanogaster CG31094-P... 44 2e-04
AY118892-1|AAM50752.1| 298|Drosophila melanogaster LD01251p pro... 28 6.7
AY058564-1|AAL13793.1| 298|Drosophila melanogaster LD25280p pro... 28 6.7
AE014134-389|AAX52652.1| 298|Drosophila melanogaster CG9967-PB,... 28 6.7
AE014134-388|AAF51269.1| 298|Drosophila melanogaster CG9967-PA,... 28 6.7
>BT011437-1|AAR99095.1| 380|Drosophila melanogaster RE61404p
protein.
Length = 380
Score = 48.4 bits (110), Expect = 6e-06
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = +2
Query: 413 VTSMNFDNPVYRKTTEDQFALEKNG 487
V SMNF+NPVY KTTED F+LEKNG
Sbjct: 331 VNSMNFENPVYHKTTEDHFSLEKNG 355
>BT010094-1|AAQ22563.1| 861|Drosophila melanogaster GH26833p
protein.
Length = 861
Score = 48.4 bits (110), Expect = 6e-06
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = +2
Query: 413 VTSMNFDNPVYRKTTEDQFALEKNG 487
V SMNF+NPVY KTTED F+LEKNG
Sbjct: 812 VNSMNFENPVYHKTTEDHFSLEKNG 836
>BT010074-1|AAQ22543.1| 1064|Drosophila melanogaster LD11117p protein.
Length = 1064
Score = 48.4 bits (110), Expect = 6e-06
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = +2
Query: 413 VTSMNFDNPVYRKTTEDQFALEKNG 487
V SMNF+NPVY KTTED F+LEKNG
Sbjct: 1015 VNSMNFENPVYHKTTEDHFSLEKNG 1039
>AE014297-3842|AAO41604.1| 826|Drosophila melanogaster CG31092-PB,
isoform B protein.
Length = 826
Score = 48.4 bits (110), Expect = 6e-06
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = +2
Query: 413 VTSMNFDNPVYRKTTEDQFALEKNG 487
V SMNF+NPVY KTTED F+LEKNG
Sbjct: 777 VNSMNFENPVYHKTTEDHFSLEKNG 801
>AE014297-3841|AAF56498.3| 1069|Drosophila melanogaster CG31092-PA,
isoform A protein.
Length = 1069
Score = 48.4 bits (110), Expect = 6e-06
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = +2
Query: 413 VTSMNFDNPVYRKTTEDQFALEKNG 487
V SMNF+NPVY KTTED F+LEKNG
Sbjct: 1020 VNSMNFENPVYHKTTEDHFSLEKNG 1044
>BT011063-1|AAR31134.1| 1037|Drosophila melanogaster LD21010p protein.
Length = 1037
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Frame = +2
Query: 389 YRHYVHHNVTSMNFDNPVYRK--TTEDQFALEKN 484
YR+ + SMNF+NP+YRK TTED F+L KN
Sbjct: 979 YRYCSKRRINSMNFENPIYRKTTTTEDHFSLRKN 1012
>BT011057-1|AAR31128.1| 996|Drosophila melanogaster RE40649p protein.
Length = 996
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Frame = +2
Query: 389 YRHYVHHNVTSMNFDNPVYRK--TTEDQFALEKN 484
YR+ + SMNF+NP+YRK TTED F+L KN
Sbjct: 938 YRYCSKRRINSMNFENPIYRKTTTTEDHFSLRKN 971
>BT001632-1|AAN71387.1| 739|Drosophila melanogaster RE38584p
protein.
Length = 739
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Frame = +2
Query: 389 YRHYVHHNVTSMNFDNPVYRK--TTEDQFALEKN 484
YR+ + SMNF+NP+YRK TTED F+L KN
Sbjct: 681 YRYCSKRRINSMNFENPIYRKTTTTEDHFSLRKN 714
>AE014297-3844|AAF56499.2| 883|Drosophila melanogaster CG31094-PA,
isoform A protein.
Length = 883
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Frame = +2
Query: 389 YRHYVHHNVTSMNFDNPVYRK--TTEDQFALEKN 484
YR+ + SMNF+NP+YRK TTED F+L KN
Sbjct: 825 YRYCSKRRINSMNFENPIYRKTTTTEDHFSLRKN 858
>AE014297-3843|AAF56500.3| 1031|Drosophila melanogaster CG31094-PB,
isoform B protein.
Length = 1031
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Frame = +2
Query: 389 YRHYVHHNVTSMNFDNPVYRK--TTEDQFALEKN 484
YR+ + SMNF+NP+YRK TTED F+L KN
Sbjct: 973 YRYCSKRRINSMNFENPIYRKTTTTEDHFSLRKN 1006
>AY118892-1|AAM50752.1| 298|Drosophila melanogaster LD01251p
protein.
Length = 298
Score = 28.3 bits (60), Expect = 6.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -2
Query: 424 HRCNVMMYVVSVHNTCDHCS 365
H CNV ++ ++ +TC HC+
Sbjct: 20 HHCNVKVFCFTLPHTCPHCN 39
>AY058564-1|AAL13793.1| 298|Drosophila melanogaster LD25280p
protein.
Length = 298
Score = 28.3 bits (60), Expect = 6.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -2
Query: 424 HRCNVMMYVVSVHNTCDHCS 365
H CNV ++ ++ +TC HC+
Sbjct: 20 HHCNVKVFCFTLPHTCPHCN 39
>AE014134-389|AAX52652.1| 298|Drosophila melanogaster CG9967-PB,
isoform B protein.
Length = 298
Score = 28.3 bits (60), Expect = 6.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -2
Query: 424 HRCNVMMYVVSVHNTCDHCS 365
H CNV ++ ++ +TC HC+
Sbjct: 20 HHCNVKVFCFTLPHTCPHCN 39
>AE014134-388|AAF51269.1| 298|Drosophila melanogaster CG9967-PA,
isoform A protein.
Length = 298
Score = 28.3 bits (60), Expect = 6.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -2
Query: 424 HRCNVMMYVVSVHNTCDHCS 365
H CNV ++ ++ +TC HC+
Sbjct: 20 HHCNVKVFCFTLPHTCPHCN 39
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,187,018
Number of Sequences: 53049
Number of extensions: 456998
Number of successful extensions: 1040
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1035
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -