Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS333C09f
         (432 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070982-1|AAL48604.1|  306|Drosophila melanogaster RE07882p pro...    40   0.002
AE014297-436|AAF51889.2|  306|Drosophila melanogaster CG1169-PA ...    40   0.002

>AY070982-1|AAL48604.1|  306|Drosophila melanogaster RE07882p
           protein.
          Length = 306

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 23/73 (31%), Positives = 37/73 (50%)
 Frame = +2

Query: 212 RRTKLRSLXHLSIVKTGTVEDDESADPXLAKDPAYEMFDTVDKFLQSHTLXVKVPEEITK 391
           R+ ++R    LSIV+T    +  S +P         +FD +D +L SH+L ++ PE    
Sbjct: 65  RQPEVRITERLSIVRTAEKVESRSMNPE------ERLFDDIDSYLGSHSLRIQAPEYFRT 118

Query: 392 SAASEYVPWXLLT 430
           S A   VP  L++
Sbjct: 119 SEARSLVPDFLMS 131



 Score = 34.3 bits (75), Expect = 0.071
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +3

Query: 114 SKLXXNIYNECLXQYSXECVKPRTLQWMSS 203
           ++L  ++Y+ CL   S  CV+P+ LQW +S
Sbjct: 33  TQLALDMYHGCLKDLSVSCVRPKALQWFNS 62


>AE014297-436|AAF51889.2|  306|Drosophila melanogaster CG1169-PA
           protein.
          Length = 306

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 23/73 (31%), Positives = 37/73 (50%)
 Frame = +2

Query: 212 RRTKLRSLXHLSIVKTGTVEDDESADPXLAKDPAYEMFDTVDKFLQSHTLXVKVPEEITK 391
           R+ ++R    LSIV+T    +  S +P         +FD +D +L SH+L ++ PE    
Sbjct: 65  RQPEVRITERLSIVRTAEKVESRSMNPE------ERLFDDIDSYLGSHSLRIQAPEYFRT 118

Query: 392 SAASEYVPWXLLT 430
           S A   VP  L++
Sbjct: 119 SEARSLVPDFLMS 131



 Score = 34.3 bits (75), Expect = 0.071
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +3

Query: 114 SKLXXNIYNECLXQYSXECVKPRTLQWMSS 203
           ++L  ++Y+ CL   S  CV+P+ LQW +S
Sbjct: 33  TQLALDMYHGCLKDLSVSCVRPKALQWFNS 62


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,183,680
Number of Sequences: 53049
Number of extensions: 273366
Number of successful extensions: 542
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 542
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1355285490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)