Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS333B12f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M61951-1|AAA59486.1| 1786|Homo sapiens laminin B1 protein.             30   5.7  
M61916-1|AAA59482.1| 1786|Homo sapiens laminin B1 protein.             30   5.7  
M55370-1|AAA59485.1| 1786|Homo sapiens laminin B1 protein.             30   5.7  
BC113455-1|AAI13456.1| 1786|Homo sapiens laminin, beta 1 protein.      30   5.7  
BC015625-1|AAH15625.1|  477|Homo sapiens tyrosyl-tRNA synthetase...    29   9.9  
AK024057-1|BAB14806.1|  477|Homo sapiens protein ( Homo sapiens ...    29   9.9  
AF132939-1|AAD27714.1|  476|Homo sapiens CGI-04 protein protein.       29   9.9  

>M61951-1|AAA59486.1| 1786|Homo sapiens laminin B1 protein.
          Length = 1786

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -2

Query: 241 ITNFNFLFIKVHTCDDSNPVRKFNCRDDTRLKLYRFVPR-NCSCF 110
           ITN    F+K+HT  D+    +   R+     +Y  V R NC C+
Sbjct: 230 ITNLRIKFVKLHTLGDNLLDSRMEIREKYYYAVYDMVVRGNCFCY 274


>M61916-1|AAA59482.1| 1786|Homo sapiens laminin B1 protein.
          Length = 1786

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -2

Query: 241 ITNFNFLFIKVHTCDDSNPVRKFNCRDDTRLKLYRFVPR-NCSCF 110
           ITN    F+K+HT  D+    +   R+     +Y  V R NC C+
Sbjct: 230 ITNLRIKFVKLHTLGDNLLDSRMEIREKYYYAVYDMVVRGNCFCY 274


>M55370-1|AAA59485.1| 1786|Homo sapiens laminin B1 protein.
          Length = 1786

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -2

Query: 241 ITNFNFLFIKVHTCDDSNPVRKFNCRDDTRLKLYRFVPR-NCSCF 110
           ITN    F+K+HT  D+    +   R+     +Y  V R NC C+
Sbjct: 230 ITNLRIKFVKLHTLGDNLLDSRMEIREKYYYAVYDMVVRGNCFCY 274


>BC113455-1|AAI13456.1| 1786|Homo sapiens laminin, beta 1 protein.
          Length = 1786

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -2

Query: 241 ITNFNFLFIKVHTCDDSNPVRKFNCRDDTRLKLYRFVPR-NCSCF 110
           ITN    F+K+HT  D+    +   R+     +Y  V R NC C+
Sbjct: 230 ITNLRIKFVKLHTLGDNLLDSRMEIREKYYYAVYDMVVRGNCFCY 274


>BC015625-1|AAH15625.1|  477|Homo sapiens tyrosyl-tRNA synthetase 2,
           mitochondrial protein.
          Length = 477

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 357 FPYSTYAGNEFTLDNVHVGHCLFYL 431
           FP + Y G + T D++HVGH L  L
Sbjct: 72  FPQTIYCGFDPTADSLHVGHLLALL 96


>AK024057-1|BAB14806.1|  477|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13995 fis, clone Y79AA1002209, weakly similar to
           TYROSYL-TRNA SYNTHETASE (EC 6.1.1.1). ).
          Length = 477

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 357 FPYSTYAGNEFTLDNVHVGHCLFYL 431
           FP + Y G + T D++HVGH L  L
Sbjct: 72  FPQTIYCGFDPTADSLHVGHLLALL 96


>AF132939-1|AAD27714.1|  476|Homo sapiens CGI-04 protein protein.
          Length = 476

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 357 FPYSTYAGNEFTLDNVHVGHCLFYL 431
           FP + Y G + T D++HVGH L  L
Sbjct: 71  FPQTIYCGFDPTADSLHVGHLLALL 95


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,741,059
Number of Sequences: 237096
Number of extensions: 1214291
Number of successful extensions: 1488
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1488
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)