Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS333B09f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC902.05c |idh2|glu2|isocitrate dehydrogenase |Schizosaccharom... 204 6e-54
SPAC11G7.03 |idh1|glu3|isocitrate dehydrogenase |Schizosaccharom... 172 3e-44
SPAC31G5.04 |||homoisocitrate dehydrogenase|Schizosaccharomyces ... 89 3e-19
SPBC1A4.02c |leu1|SPBC1E8.07c|3-isopropylmalate dehydrogenase Le... 37 0.002
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 29 0.32
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 1.3
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 1.7
SPBPB2B2.12c |||UDP-glucose 4-epimerase|Schizosaccharomyces pomb... 27 1.7
SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr 1||... 27 2.2
SPAC23D3.08 |usp108||U1 snRNP-associated protein Usp108|Schizosa... 26 3.9
SPAC6B12.10c |spp1|pri1|DNA primase catalytic subunit Spp1 |Schi... 26 3.9
SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr 1|... 25 5.2
SPBC11G11.07 ||SPBC18H10.01|karyopherin|Schizosaccharomyces pomb... 25 6.8
SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase ... 25 6.8
SPBC215.09c |erg10||acetyl-CoA C-acetyltransferase Erg10 |Schizo... 25 9.0
SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces... 25 9.0
>SPBC902.05c |idh2|glu2|isocitrate dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 204 bits (498), Expect = 6e-54
Identities = 103/176 (58%), Positives = 127/176 (72%), Gaps = 5/176 (2%)
Frame = +3
Query: 6 ATRAGAAQY-----STGVRKVTLIPGHGIGPEITVAVQKIFEAAKVPIEWEEVDVTAVRG 170
+T+A A Y + G VT+I G GIGPEI +V++IF+AAKVPIEWE V V +
Sbjct: 28 STKAAAGTYEGVKNANGNYTVTMIAGDGIGPEIAQSVERIFKAAKVPIEWERVKVYPIL- 86
Query: 171 PDGKFGIPQKAIDSVNANKIGLKGPLMTPVGKGYRSLNLALRKEFDLYANVRPCKSLEGI 350
+G IP A +SV NK+ LKGPL TP+GKG+ S+NL LR+ F L+ANVRPC S+ G
Sbjct: 87 KNGTTTIPDDAKESVRKNKVALKGPLATPIGKGHVSMNLTLRRTFGLFANVRPCVSITGY 146
Query: 351 KTLYDNVDVVTIRENTEGEYSGIEHEIVDGVVQSIKLITEEASTRVAEFAFQFARE 518
KT YDNV+ V IRENTEGEYSGIEHE++ GVVQSIKLIT AS RV +AFQ+AR+
Sbjct: 147 KTPYDNVNTVLIRENTEGEYSGIEHEVIPGVVQSIKLITRAASERVIRYAFQYARQ 202
>SPAC11G7.03 |idh1|glu3|isocitrate dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 172 bits (418), Expect = 3e-44
Identities = 89/163 (54%), Positives = 115/163 (70%), Gaps = 2/163 (1%)
Frame = +3
Query: 39 GVRKVTLIPGHGIGPEITVAVQKIFEAAKVPIEWEEVDVTAVRGPDGKFGIP-QKAIDSV 215
G VTLIPG GIG E + AV +IF+ A VPIE+EE+DVT + + G +AI S+
Sbjct: 19 GKYTVTLIPGDGIGRETSNAVTEIFKTANVPIEFEEIDVTGMEKNNKSSGDALHEAIQSL 78
Query: 216 NANKIGLKGPLMTPVGKG-YRSLNLALRKEFDLYANVRPCKSLEGIKTLYDNVDVVTIRE 392
NK+GLKG L TP KG + S N+ALRKE D+YA++ K++ G KT +DNVD IRE
Sbjct: 79 KRNKVGLKGILFTPFEKGGHTSFNVALRKELDIYASLVLIKNIPGFKTRHDNVDFAIIRE 138
Query: 393 NTEGEYSGIEHEIVDGVVQSIKLITEEASTRVAEFAFQFAREN 521
NTEGEYSG+EH+ V GVV+S+K+ITE S R+A+FAF FA +N
Sbjct: 139 NTEGEYSGLEHQSVPGVVESLKIITEYKSKRIAQFAFDFALQN 181
>SPAC31G5.04 |||homoisocitrate dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 362
Score = 89.4 bits (212), Expect = 3e-19
Identities = 60/164 (36%), Positives = 95/164 (57%), Gaps = 11/164 (6%)
Frame = +3
Query: 57 LIPGHGIGPEITVAVQKIFE--AAKVPIEWEEVDVTAVRGPDGKFG--IPQKAIDSVNAN 224
LIP GIG E+ A +++ E AK ++++ +D+ A G + G +P++ ++ +
Sbjct: 11 LIPADGIGKEVVPAARRLMENLPAKHKLKFDFIDLDAGWGTFERTGKALPERTVERLKTE 70
Query: 225 -KIGLKGPLMTPVGK--GYRSLNLALRKEFDLYANVRPCKSLEGIKTLYDNVDVVTIREN 395
L G + +P K GY S +ALRK+ LYANVRP KSL+G K VD+V +REN
Sbjct: 71 CNAALFGAVQSPTHKVAGYSSPIVALRKKMGLYANVRPVKSLDGAKG--KPVDLVIVREN 128
Query: 396 TEGEYSGIEHEIVD----GVVQSIKLITEEASTRVAEFAFQFAR 515
TE Y E + + V ++I+ I+EEAST++ + AF+ A+
Sbjct: 129 TECLYVKEERMVQNTPGKRVAEAIRRISEEASTKIGKMAFEIAK 172
>SPBC1A4.02c |leu1|SPBC1E8.07c|3-isopropylmalate dehydrogenase
Leu1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 371
Score = 37.1 bits (82), Expect = 0.002
Identities = 43/142 (30%), Positives = 64/142 (45%), Gaps = 18/142 (12%)
Frame = +3
Query: 45 RKVTLIPGHGIGPEITVA---VQKIFEAAKVPIEWEEVDVTAVRGPDGKFGIP-----QK 200
+K+ ++PG IGPEI + V K+ E + ++ E + +G P K
Sbjct: 4 KKIVVLPGDHIGPEIVASALEVLKVVEKKRPELKLEFEEHKIGGASIDAYGTPLTDETVK 63
Query: 201 AIDSVNANKIG-LKGPLMT-PVGKGYRSLNLALRKEFDLYANVRPC----KSLEGIKTL- 359
A + +G + GP T P + + L L LRK ++AN+RPC KSL L
Sbjct: 64 ACLEADGVLLGAVGGPEWTNPNCRPEQGL-LKLRKSMGVWANLRPCNFASKSLVKYSPLK 122
Query: 360 ---YDNVDVVTIRENTEGEYSG 416
+ VD +RE T G Y G
Sbjct: 123 PEIVEGVDFCVVRELTGGCYFG 144
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 29.5 bits (63), Expect = 0.32
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 7/145 (4%)
Frame = -2
Query: 496 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST--LSYSVLIPSKLLQGL 323
NS+T + +S+V++ +TP T S + +P S +V TST YSVL S +
Sbjct: 547 NSSTPITSSTVVNT---STPITSSSVLNSSTPITSSTVVNTSTPITRYSVLNSSTPITSS 603
Query: 322 TLAYKSNSFLRAK-LSDL*PLPTGVIRGPFKPILLAFTESIAFWGIPNLPSGPLTAVTS- 149
T+ S + L+ P+ + PI + S+ P S L + T
Sbjct: 604 TVLNSSTPITSSSVLNSSTPITSSTALNTSTPIT---SSSVLNSSTPITSSSVLNSSTPI 660
Query: 148 TSSHSIGT---LAASKIF*TATVIS 83
TSS ++ T + +S + ++T I+
Sbjct: 661 TSSTALNTSTPITSSSVLNSSTPIT 685
Score = 29.5 bits (63), Expect = 0.32
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 5/144 (3%)
Frame = -2
Query: 496 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST--LSYSVLIPSKLLQGL 323
NS+T V +SSV++ +TP T S + +P S + TST S SVL S +
Sbjct: 3355 NSSTPVTSSSVLN---SSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSS 3411
Query: 322 TLAYKSNSFLRA-KLSDL*PLPTGVIRGPFKPILLA--FTESIAFWGIPNLPSGPLTAVT 152
T+ S + L+ P+ + + PI + S A L S T +T
Sbjct: 3412 TVVNSSTPITSSTALNTSTPITSSTVVNSSTPITSSSVLNSSTAIASSSILNSS--TPIT 3469
Query: 151 STSSHSIGTLAASKIF*TATVISG 80
S+S + T +S T++V+ G
Sbjct: 3470 SSSVLNSSTPISSSTVITSSVVIG 3493
Score = 28.7 bits (61), Expect = 0.56
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 7/145 (4%)
Frame = -2
Query: 496 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST--LSYSVLIPSKLLQGL 323
NS+T + +SS+++ +TP T S + +P S +V TST S SVL S +
Sbjct: 751 NSSTPITSSSILN---SSTPITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSS 807
Query: 322 TLAYKSNSFLRAK-LSDL*PLPTGVIRGPFKPILLAFTESIAFWGIPNLPSGPLTAVTS- 149
T+ S + L+ P+ + + PI + ++ P S L + T
Sbjct: 808 TVLNSSTPITSSSVLNSSTPITSSTVVNTSTPIT---SSTVVNSSTPITSSSVLNSSTPI 864
Query: 148 TSSHSIGT---LAASKIF*TATVIS 83
TSS ++ T + +S + ++T I+
Sbjct: 865 TSSTALNTSTPITSSSVLNSSTPIT 889
Score = 28.7 bits (61), Expect = 0.56
Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 11/159 (6%)
Frame = -2
Query: 496 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST-LSYSVLIPSKLLQGLT 320
NS+T + +S+V++ +TP T S + +P S +V TST ++ S ++ S +
Sbjct: 2251 NSSTPITSSTVVNT---STPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNSSTPITSS 2307
Query: 319 LAYKSNSFLRAK--LSDL*PLPTGVIRGPFKPI----LLAFTESIAFWGIPNLPSGPLTA 158
A +++ + + L+ P+ + + PI +L + I + N S P+T+
Sbjct: 2308 TALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVN-TSTPITS 2366
Query: 157 V----TSTSSHSIGTLAASKIF*TATVISGPIPCPGMSV 53
TSTS S L +S ++TV++ P SV
Sbjct: 2367 STALNTSTSITSSSVLNSSTPITSSTVVNTSTPITSSSV 2405
Score = 28.3 bits (60), Expect = 0.73
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Frame = -2
Query: 496 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST--LSYSVLIPSKLLQGL 323
NS+T + +S+V++ +TP T S + +P S +V TST S +V+ S +
Sbjct: 1147 NSSTPITSSTVVNT---STPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSS 1203
Query: 322 TLAYKSNSFLRAK-LSDL*PLPTGVIRGPFKPILLAFTESIAFWGIPNLPSGPLTAVTST 146
T+ S + L+ P+ + + PI + SI P S L + T
Sbjct: 1204 TVVNSSTPITSSTVLNTSTPITSSSVLNSSTPIT---SSSILNSSTPITSSSVLNSSTPI 1260
Query: 145 SSHSIGTLAASKIF*TATVISGPIPCPGMSV 53
+S ++ + +S ++T ++ IP SV
Sbjct: 1261 TSSTV--VNSSTPITSSTALNTSIPITSSSV 1289
Score = 28.3 bits (60), Expect = 0.73
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = -2
Query: 496 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST--LSYSVLIPSKLLQGL 323
NS+T + +SSV++ +TP T S + +P S +V TST S SVL S +
Sbjct: 3223 NSSTAITSSSVLN---SSTPITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSS 3279
Query: 322 TLAYKS 305
T+ S
Sbjct: 3280 TVVNTS 3285
Score = 27.9 bits (59), Expect = 0.97
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 6/153 (3%)
Frame = -2
Query: 493 SATLVLASSVIS---LMDCTTPSTISCSIPEYSPSVFSLIVTTST--LSYSVLIPSKLLQ 329
S+T+V S+ I+ ++ +TP T S + +P S +V TST S +V+ S +
Sbjct: 2762 SSTVVNTSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPIT 2821
Query: 328 GLTLAYKSNSFLRAK-LSDL*PLPTGVIRGPFKPILLAFTESIAFWGIPNLPSGPLTAVT 152
T+ S + L+ P+ + PI + S+ P S L T
Sbjct: 2822 SSTVLNSSTPITSSSVLNSSTPITSSTALNTSTPIT---SSSVLNSSTPITSSTALNTST 2878
Query: 151 STSSHSIGTLAASKIF*TATVISGPIPCPGMSV 53
S +S S+ L +S ++TV++ P SV
Sbjct: 2879 SITSSSV--LNSSTPITSSTVVNTSTPITSSSV 2909
Score = 27.1 bits (57), Expect = 1.7
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = -2
Query: 496 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST--LSYSVLIPSKLLQGL 323
NS+T + +S+V++ +TP T S + +P S +V TST S SVL S +
Sbjct: 1411 NSSTPITSSTVVNT---STPITSSTVVNSSTPITSSTVVNTSTPITSSSVLNSSTPITSS 1467
Query: 322 TLAYKS 305
T+ S
Sbjct: 1468 TVVNTS 1473
Score = 26.6 bits (56), Expect = 2.2
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = -2
Query: 496 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST 368
NS+T + +SSV++ +TP T S + +P S +V TST
Sbjct: 1987 NSSTPITSSSVLNT---STPITSSSVLNSSTPITSSTVVNTST 2026
Score = 26.6 bits (56), Expect = 2.2
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 3/125 (2%)
Frame = -2
Query: 496 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST--LSYSVLIPSKLLQGL 323
NS+T + +S+V++ +TP T S + +P S +V TST S +V+ S + L
Sbjct: 2515 NSSTPITSSTVLN---SSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSL 2571
Query: 322 TLAYKSNSFLRAK-LSDL*PLPTGVIRGPFKPILLAFTESIAFWGIPNLPSGPLTAVTST 146
T S + L+ P+ + + PI + ++ P S L T
Sbjct: 2572 TALNSSTPITSSSVLNSSTPITSSTVVNTSTPIT---SSTVVNSSTPITSSTALNTSTPI 2628
Query: 145 SSHSI 131
+S S+
Sbjct: 2629 TSSSV 2633
Score = 26.6 bits (56), Expect = 2.2
Identities = 37/151 (24%), Positives = 64/151 (42%), Gaps = 3/151 (1%)
Frame = -2
Query: 496 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST--LSYSVLIPSKLLQGL 323
NS+T + +SS+++ +TP T S + +P S + TST S SVL S +
Sbjct: 3127 NSSTPITSSSILN---SSTPITSSTVVNSSTPITSSTTLNTSTPITSSSVLNSSTAITSS 3183
Query: 322 TLAYKSNSFLRAK-LSDL*PLPTGVIRGPFKPILLAFTESIAFWGIPNLPSGPLTAVTST 146
++ S + L+ P+ + PI + S+ S L + T
Sbjct: 3184 SIVNSSTPITSSSVLNSSTPITSSTTLNTSTPIT---SSSVLNSSTAITSSSVLNSSTPI 3240
Query: 145 SSHSIGTLAASKIF*TATVISGPIPCPGMSV 53
+S S+ L +S ++TV++ P SV
Sbjct: 3241 TSSSV--LNSSTPITSSTVVNTSTPITSSSV 3269
Score = 26.2 bits (55), Expect = 3.0
Identities = 37/151 (24%), Positives = 64/151 (42%), Gaps = 3/151 (1%)
Frame = -2
Query: 496 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST--LSYSVLIPSKLLQGL 323
NS+T + +S+V++ +TP T S + +P S +V TST S +V+ S +
Sbjct: 1339 NSSTPITSSTVVN---SSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSS 1395
Query: 322 TLAYKSNSFLRAK-LSDL*PLPTGVIRGPFKPILLAFTESIAFWGIPNLPSGPLTAVTST 146
T+ S + L+ P+ + + PI T S + S + TST
Sbjct: 1396 TVLNSSTPITSSSVLNSSTPITSSTVVNTSTPI----TSSTVVNSSTPITSSTVVN-TST 1450
Query: 145 SSHSIGTLAASKIF*TATVISGPIPCPGMSV 53
S L +S ++TV++ P +V
Sbjct: 1451 PITSSSVLNSSTPITSSTVVNTSTPITSSTV 1481
Score = 26.2 bits (55), Expect = 3.0
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -2
Query: 496 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST 368
NS+T + +S+V++ +TP T S + +P S +V TST
Sbjct: 1459 NSSTPITSSTVVNT---STPITSSTVVNSSTPITSSTVVNTST 1498
Score = 26.2 bits (55), Expect = 3.0
Identities = 35/144 (24%), Positives = 68/144 (47%), Gaps = 6/144 (4%)
Frame = -2
Query: 496 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST-LSYSVLIPSKLLQGLT 320
NS+T + +S+V++ +TP T S + +P S +V TST ++ S ++ S +
Sbjct: 2983 NSSTPITSSTVVNT---STPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSS 3039
Query: 319 LAYKSNSFLRAK--LSDL*PLPTGVIRGPFKPIL--LAFTESIAFWGIPNLPSGPLTAVT 152
A +++ + + L+ P+ + + PI A S L S TA+T
Sbjct: 3040 TALNTSTPITSSTVLNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSS--TAIT 3097
Query: 151 STSSHSIGT-LAASKIF*TATVIS 83
S+S + T + +S + ++T I+
Sbjct: 3098 SSSIVNSSTPITSSSVLNSSTAIT 3121
Score = 25.8 bits (54), Expect = 3.9
Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 10/158 (6%)
Frame = -2
Query: 496 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST--LSYSVLIPSKLLQGL 323
NS+T + +SS+++ +TP T S + +P S + TST S SVL S +
Sbjct: 415 NSSTPITSSSILN---SSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSS 471
Query: 322 TLAYKSNSFLRAK-LSDL*PLPTGVIRGPFKPIL--LAFTESIAFWGIPNLPSG-PLTAV 155
++ S + ++ P+ + + PI A S L S P+T+
Sbjct: 472 SVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSS 531
Query: 154 ----TSTSSHSIGTLAASKIF*TATVISGPIPCPGMSV 53
TSTS S L +S ++TV++ P SV
Sbjct: 532 TALNTSTSITSSSVLNSSTPITSSTVVNTSTPITSSSV 569
Score = 25.8 bits (54), Expect = 3.9
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -2
Query: 496 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST 368
N++T + +SSV++ +TP T S + +P S +V TST
Sbjct: 1327 NTSTPITSSSVLN---SSTPITSSTVVNSSTPITSSTVVNTST 1366
Score = 25.8 bits (54), Expect = 3.9
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -2
Query: 496 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST 368
N++T + +SSV++ +TP T S + +P S +V TST
Sbjct: 2167 NTSTPITSSSVLN---SSTPITSSTVVNSSTPITSSTVVNTST 2206
Score = 25.8 bits (54), Expect = 3.9
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -2
Query: 496 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST 368
NS+T + +S+V++ +TP T S + +P S +V TST
Sbjct: 2179 NSSTPITSSTVVN---SSTPITSSTVVNTSTPITSSTVVNTST 2218
Score = 25.8 bits (54), Expect = 3.9
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -2
Query: 496 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST 368
NS+T + +S+V++ +TP T S + +P S +V TST
Sbjct: 2383 NSSTPITSSTVVNT---STPITSSSVLNSSTPITSSTVVNTST 2422
Score = 25.8 bits (54), Expect = 3.9
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -2
Query: 496 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST 368
NS+T + +S+V++ +TP T S + +P S +V TST
Sbjct: 2659 NSSTPITSSTVVNT---STPITSSSVLNSSTPITSSTVVNTST 2698
Score = 25.8 bits (54), Expect = 3.9
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -2
Query: 496 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST 368
NS+T + +S+V++ +TP T S + +P S +V TST
Sbjct: 2731 NSSTPITSSTVVNT---STPITSSSVLNSSTPITSSTVVNTST 2770
Score = 25.8 bits (54), Expect = 3.9
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -2
Query: 496 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST 368
NS+T + +S+V++ +TP T S + +P S +V TST
Sbjct: 2887 NSSTPITSSTVVNT---STPITSSSVLNSSTPITSSTVVNTST 2926
Score = 25.8 bits (54), Expect = 3.9
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -2
Query: 496 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST 368
NS+T + +S+V++ +TP T S + +P S +V TST
Sbjct: 3247 NSSTPITSSTVVNT---STPITSSSVLNSSTPITSSTVVNTST 3286
Score = 25.4 bits (53), Expect = 5.2
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -2
Query: 496 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST 368
NS+T + +S+V++ +TP T S + +P S +V TST
Sbjct: 1087 NSSTPITSSTVLN---SSTPITSSSVLNSSTPITSSTVVNTST 1126
Score = 25.4 bits (53), Expect = 5.2
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -2
Query: 496 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST 368
N++T + +SSV++ +TP T S + +P S +V TST
Sbjct: 1531 NTSTPITSSSVLN---SSTPITSSSVLNSSTPITSSTVVNTST 1570
Score = 25.4 bits (53), Expect = 5.2
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -2
Query: 496 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST 368
NS+T + +S+V++ +TP T S + +P S +V TST
Sbjct: 2227 NSSTPITSSTVLN---SSTPITSSSVLNSSTPITSSTVVNTST 2266
Score = 24.6 bits (51), Expect = 9.0
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = -2
Query: 496 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST 368
NS+T + +S+ ++ +TP T S + +P S +V TST
Sbjct: 1015 NSSTAITSSTALNT---STPITSSSVLNSSTPITSSTVVNTST 1054
Score = 24.6 bits (51), Expect = 9.0
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = -2
Query: 496 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST--LSYSVLIPSKLLQGL 323
NS+T + +SSV++ +TP T S + +P S + TST S SVL S +
Sbjct: 1099 NSSTPITSSSVLN---SSTPITSSTVVNTSTPITSSTALNTSTPITSSSVLNSSTPITSS 1155
Query: 322 TLAYKS 305
T+ S
Sbjct: 1156 TVVNTS 1161
Score = 24.6 bits (51), Expect = 9.0
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = -2
Query: 496 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST 368
N++T + +S+V++ +TP T S + +P S +V TST
Sbjct: 1471 NTSTPITSSTVVN---SSTPITSSTVVNTSTPITSSTVVNTST 1510
Score = 24.6 bits (51), Expect = 9.0
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 4/152 (2%)
Frame = -2
Query: 496 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST--LSYSVLIPSKLLQGL 323
NS+T + +S+ ++ +TP T S + +P S +V TST S +V+ S +
Sbjct: 2467 NSSTPITSSTALNT---STPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSS 2523
Query: 322 TLAYKSNSFLRAK-LSDL*PLPTGVIRGPFKPILLAFTESIAFWGIPNLPSGPLTAV-TS 149
T+ S + L+ P+ + + PI T S + P LTA+ +S
Sbjct: 2524 TVLNSSTPITSSSVLNSSTPITSSTVVNTSTPI----TSSTVV--NSSTPITSLTALNSS 2577
Query: 148 TSSHSIGTLAASKIF*TATVISGPIPCPGMSV 53
T S L +S ++TV++ P +V
Sbjct: 2578 TPITSSSVLNSSTPITSSTVVNTSTPITSSTV 2609
Score = 24.6 bits (51), Expect = 9.0
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = -2
Query: 496 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST--LSYSVLIPSKLLQGL 323
NS+T + +S+ ++ +TP T S + +P S +V TST S SVL S +
Sbjct: 2707 NSSTPITSSTALNT---STPITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSS 2763
Query: 322 TLAYKS 305
T+ S
Sbjct: 2764 TVVNTS 2769
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.5 bits (58), Expect = 1.3
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 10/62 (16%)
Frame = -2
Query: 496 NSATLVLASSVISLM----------DCTTPSTISCSIPEYSPSVFSLIVTTSTLSYSVLI 347
NS+TL+ ASS +L+ TT S IS ++P + S S + +STL+ S+ +
Sbjct: 737 NSSTLITASSSNTLLSSITSSSAIVSSTTVSNISSNLPSATASSQSQLTNSSTLATSLYL 796
Query: 346 PS 341
S
Sbjct: 797 SS 798
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 27.1 bits (57), Expect = 1.7
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = -2
Query: 499 ANSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTSTLSYSVLIPS 341
++S++ ++ASS S M ++ S S S+P S S S +TTS LS S I S
Sbjct: 124 SSSSSSLVASSSSSGMSSSSLSH-SSSVPSSSSSYHSSSMTTSGLSSSASIVS 175
>SPBPB2B2.12c |||UDP-glucose 4-epimerase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 27.1 bits (57), Expect = 1.7
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = -2
Query: 418 IPEYSPSVFSLIVTTSTLSYSVLIPSKLLQGLTLAYKSNSFLRAKLSDL*PLPTGVI 248
IPEYS + + T+ +++ P+K + G + +N +L K++ LPTG I
Sbjct: 516 IPEYSKLNVTAVNLTNHSYWNLASPNKTIDGTIIKSTTNVYL--KVNSETSLPTGDI 570
>SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1116
Score = 26.6 bits (56), Expect = 2.2
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = -1
Query: 500 GELRHSRTGLLRDQLDGLHDPVDDLVLDTGILTLGVLSDRDHVNVV 363
GEL + + ++G HD + ++D+ + +++D DH+N+V
Sbjct: 848 GELIAVKQVEIPQTINGRHDQLRKDIVDSINAEISMIADLDHLNIV 893
>SPAC23D3.08 |usp108||U1 snRNP-associated protein
Usp108|Schizosaccharomyces pombe|chr 1|||Manual
Length = 382
Score = 25.8 bits (54), Expect = 3.9
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -2
Query: 478 LASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTSTLSYSVLIPS 341
LASS+ +L+ TP+ + + +V SLI+ + L + LIPS
Sbjct: 88 LASSIPALIKVVTPTKEEDASLNINLAVSSLILGSKVLIHQNLIPS 133
>SPAC6B12.10c |spp1|pri1|DNA primase catalytic subunit Spp1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 454
Score = 25.8 bits (54), Expect = 3.9
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 185 EFAIWTPNSCYIHFLPFDRYFSCFEDFLN 99
EFA PN YI +L F + ++ LN
Sbjct: 66 EFAFTLPNDAYIRYLSFSNWEELKKEALN 94
>SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr
1|||Manual
Length = 927
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 89 DLGPNTMSRDERNLAHASAVLSSAGS 12
DL PN +++RNL A L GS
Sbjct: 2 DLKPNIRRKEKRNLLKGEAALEKKGS 27
>SPBC11G11.07 ||SPBC18H10.01|karyopherin|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 955
Score = 25.0 bits (52), Expect = 6.8
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 255 PVGKGYRSLN--LALRKEFDLYANVRPCKSLEGIKTLYDNVDVVTI 386
PV Y+S++ LA + L A V+ + ++ L DN+D+VTI
Sbjct: 584 PVANVYQSVHSFLAPSLQSILLAQVKLNPTQAELEALADNIDIVTI 629
>SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase
Cho2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 905
Score = 25.0 bits (52), Expect = 6.8
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +3
Query: 345 GIKTLYDNVDVVTIRENTEGEYSGIEHEIVDGVVQSIKLITEEASTRVAEFA 500
G+ L DN + + ++EG +S I+ SIK ++ + ++ EF+
Sbjct: 725 GLYKLSDNASDLYTQTSSEGRWSAIDANGYTSHCSSIKSLSNDKNSGEVEFS 776
>SPBC215.09c |erg10||acetyl-CoA C-acetyltransferase Erg10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 153 VTAVRGPDGKFGIPQKAIDSVNANKIGLKGPL 248
V+AVR P G FG ++ + I +KG L
Sbjct: 9 VSAVRTPMGSFGGSFASLPATKLGSIAIKGAL 40
>SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1485
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 143 LPFDRYFSCFEDFLNGDRDLGPNTMSR 63
+ D FS +ED +GD ++ PNT ++
Sbjct: 1 MSIDADFSDYEDEASGDENVLPNTTTK 27
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,964,152
Number of Sequences: 5004
Number of extensions: 38792
Number of successful extensions: 210
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 192
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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